RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 TMEM199Q8N511 208 aa19.7■□□□□ 0.74
LRRC28-210ENST00000558879 TRPV6Q9H1D0 765 aa19.7■□□□□ 0.74
LRRC28-210ENST00000558879 WNT8AQ9H1J5 351 aa19.7■□□□□ 0.74
LRRC28-210ENST00000558879 DDX41Q9UJV9 622 aaKnown RBP19.7■□□□□ 0.74
LRRC28-210ENST00000558879 GCOM1H8Y6P7 765 aaPredicted RBP19.69■□□□□ 0.74
LRRC28-210ENST00000558879 PLEKHA8P1O95397 391 aa19.69■□□□□ 0.74
LRRC28-210ENST00000558879 POLR2MP0CAP2 368 aa19.69■□□□□ 0.74
LRRC28-210ENST00000558879 TSGA10IPQ3SY00 556 aa19.69■□□□□ 0.74
LRRC28-210ENST00000558879 TMEM240Q5SV17 173 aa19.69■□□□□ 0.74
LRRC28-210ENST00000558879 NFRKBQ6P4R8 1299 aa19.69■□□□□ 0.74
LRRC28-210ENST00000558879 PSRC1Q6PGN9 363 aaPredicted RBP19.69■□□□□ 0.74
LRRC28-210ENST00000558879 CCDC69A6NI79 296 aa19.68■□□□□ 0.74
LRRC28-210ENST00000558879 CALM1P0DP23 149 aa19.68■□□□□ 0.74
LRRC28-210ENST00000558879 CALM2P0DP24 149 aa19.68■□□□□ 0.74
LRRC28-210ENST00000558879 CALM3P0DP25 149 aa19.68■□□□□ 0.74
LRRC28-210ENST00000558879 PTPN11Q06124 597 aaPredicted RBP19.68■□□□□ 0.74
LRRC28-210ENST00000558879 NBPF20Q3BBV1 942 aa19.68■□□□□ 0.74
LRRC28-210ENST00000558879 ZNF697Q5TEC3 545 aa19.68■□□□□ 0.74
LRRC28-210ENST00000558879 RNF20Q5VTR2 975 aa19.68■□□□□ 0.74
LRRC28-210ENST00000558879 VSIG10LQ86VR7 867 aa19.68■□□□□ 0.74
LRRC28-210ENST00000558879 SRBD1Q8N5C6 995 aaKnown RBP19.68■□□□□ 0.74
LRRC28-210ENST00000558879 AFG1LQ8WV93 481 aa19.68■□□□□ 0.74
LRRC28-210ENST00000558879 GUCD1Q96NT3 240 aa19.68■□□□□ 0.74
LRRC28-210ENST00000558879 LZTS2Q9BRK4 669 aa19.68■□□□□ 0.74
LRRC28-210ENST00000558879 IL23AQ9NPF7 189 aa19.68■□□□□ 0.74
LRRC28-210ENST00000558879 TRMT13Q9NUP7 481 aaKnown RBP19.68■□□□□ 0.74
LRRC28-210ENST00000558879 STXBP5LQ9Y2K9 1186 aa19.68■□□□□ 0.74
LRRC28-210ENST00000558879 MYO9BQ13459 2157 aa19.68■□□□□ 0.74
LRRC28-210ENST00000558879 HOXD8P13378 290 aaPredicted RBP19.67■□□□□ 0.74
LRRC28-210ENST00000558879 RXRAP19793 462 aa19.67■□□□□ 0.74
LRRC28-210ENST00000558879 GNAQP50148 359 aa19.67■□□□□ 0.74
LRRC28-210ENST00000558879 NFXL1Q6ZNB6 911 aa19.67■□□□□ 0.74
LRRC28-210ENST00000558879 VWCEQ96DN2 955 aa19.67■□□□□ 0.74
LRRC28-210ENST00000558879 RRP36Q96EU6 259 aaKnown RBP19.67■□□□□ 0.74
LRRC28-210ENST00000558879 CCDC136Q96JN2 1154 aa19.67■□□□□ 0.74
LRRC28-210ENST00000558879 LRRC2Q9BYS8 371 aa19.67■□□□□ 0.74
LRRC28-210ENST00000558879 MRVI1Q9Y6F6 885 aa19.67■□□□□ 0.74
LRRC28-210ENST00000558879 WDR81Q562E7 1941 aa19.66■□□□□ 0.74
LRRC28-210ENST00000558879 TMEM265A0A087WTH1 108 aa19.66■□□□□ 0.74
LRRC28-210ENST00000558879 SUPT20HL2P0C7V6 817 aa19.66■□□□□ 0.74
LRRC28-210ENST00000558879 ADCK5Q3MIX3 580 aa19.66■□□□□ 0.74
LRRC28-210ENST00000558879 TMTC3Q6ZXV5 915 aa19.66■□□□□ 0.74
LRRC28-210ENST00000558879 SESTD1Q86VW0 696 aa19.66■□□□□ 0.74
LRRC28-210ENST00000558879 RASEFQ8IZ41 740 aa19.66■□□□□ 0.74
LRRC28-210ENST00000558879 PPTC7Q8NI37 304 aa19.66■□□□□ 0.74
LRRC28-210ENST00000558879 PIBF1Q8WXW3 757 aa19.66■□□□□ 0.74
LRRC28-210ENST00000558879 KAT2BQ92831 832 aa19.66■□□□□ 0.74
LRRC28-210ENST00000558879 NEK1Q96PY6 1258 aa19.66■□□□□ 0.74
LRRC28-210ENST00000558879 SIP14410 1827 aa19.66■□□□□ 0.74
LRRC28-210ENST00000558879 MICAL3Q7RTP6 2002 aa19.66■□□□□ 0.74
LRRC28-210ENST00000558879 PIK3CDO00329 1044 aa19.65■□□□□ 0.74
LRRC28-210ENST00000558879 ACRP10323 421 aa19.65■□□□□ 0.74
LRRC28-210ENST00000558879 CYP2C9P11712 490 aa19.65■□□□□ 0.74
LRRC28-210ENST00000558879 MYCLP12524 364 aaPredicted RBP19.65■□□□□ 0.74
LRRC28-210ENST00000558879 UBA1P22314 1058 aaKnown RBP19.65■□□□□ 0.74
LRRC28-210ENST00000558879 CCND2P30279 289 aa19.65■□□□□ 0.74
LRRC28-210ENST00000558879 EXOSC10Q01780 885 aaKnown RBP19.65■□□□□ 0.74
LRRC28-210ENST00000558879 KCNV1Q6PIU1 500 aa19.65■□□□□ 0.74
LRRC28-210ENST00000558879 APOA5Q6Q788 366 aa19.65■□□□□ 0.74
LRRC28-210ENST00000558879 ZNF365Q70YC5 407 aa19.65■□□□□ 0.74
LRRC28-210ENST00000558879 FCHSD1Q86WN1 690 aa19.65■□□□□ 0.74
LRRC28-210ENST00000558879 TTYH1Q9H313 450 aaPredicted RBP19.65■□□□□ 0.74
LRRC28-210ENST00000558879 SEC63Q9UGP8 760 aaKnown RBP19.65■□□□□ 0.74
LRRC28-210ENST00000558879 SLC12A7Q9Y666 1083 aa19.65■□□□□ 0.74
LRRC28-210ENST00000558879 CNTNAP5Q8WYK1 1306 aa19.65■□□□□ 0.74
LRRC28-210ENST00000558879 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.64■□□□□ 0.73
LRRC28-210ENST00000558879 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.64■□□□□ 0.73
LRRC28-210ENST00000558879 MEIS2O14770 477 aa19.64■□□□□ 0.73
LRRC28-210ENST00000558879 F2P00734 622 aa19.64■□□□□ 0.73
LRRC28-210ENST00000558879 CCL23P55773 120 aa19.64■□□□□ 0.73
LRRC28-210ENST00000558879 MRPS9P82933 396 aaKnown RBP19.64■□□□□ 0.73
LRRC28-210ENST00000558879 LAMC2Q13753 1193 aa19.64■□□□□ 0.73
LRRC28-210ENST00000558879 DGKDQ16760 1214 aa19.64■□□□□ 0.73
LRRC28-210ENST00000558879 FAM47CQ5HY64 1035 aa19.64■□□□□ 0.73
LRRC28-210ENST00000558879 MYSM1Q5VVJ2 828 aa19.64■□□□□ 0.73
LRRC28-210ENST00000558879 MICU3Q86XE3 530 aa19.64■□□□□ 0.73
LRRC28-210ENST00000558879 RAB11FIP4Q86YS3 637 aa19.64■□□□□ 0.73
LRRC28-210ENST00000558879 CMTR1Q8N1G2 835 aaKnown RBP19.64■□□□□ 0.73
LRRC28-210ENST00000558879 PPP1R13LQ8WUF5 828 aa19.64■□□□□ 0.73
LRRC28-210ENST00000558879 HERVK_113Q902F9 699 aa19.64■□□□□ 0.73
LRRC28-210ENST00000558879 GPKOWQ92917 476 aaPredicted RBP eCLIP19.64■□□□□ 0.73
LRRC28-210ENST00000558879 KCNB2Q92953 911 aa19.64■□□□□ 0.73
LRRC28-210ENST00000558879 INPP4AQ96PE3 977 aaPredicted RBP19.64■□□□□ 0.73
LRRC28-210ENST00000558879 CTAGE1Q96RT6 745 aa19.64■□□□□ 0.73
LRRC28-210ENST00000558879 HAS3O00219 553 aa19.63■□□□□ 0.73
LRRC28-210ENST00000558879 PITPNM1O00562 1244 aa19.63■□□□□ 0.73
LRRC28-210ENST00000558879 STAM2O75886 525 aa19.63■□□□□ 0.73
LRRC28-210ENST00000558879 TGFB3P10600 412 aa19.63■□□□□ 0.73
LRRC28-210ENST00000558879 CASTP20810 708 aaKnown RBP19.63■□□□□ 0.73
LRRC28-210ENST00000558879 ICAM3P32942 547 aa19.63■□□□□ 0.73
LRRC28-210ENST00000558879 CELF3Q5SZQ8 465 aaKnown RBP19.63■□□□□ 0.73
LRRC28-210ENST00000558879 DHX32Q7L7V1 743 aaKnown RBP19.63■□□□□ 0.73
LRRC28-210ENST00000558879 FANCBQ8NB91 859 aa19.63■□□□□ 0.73
LRRC28-210ENST00000558879 SCLYQ96I15 445 aa19.63■□□□□ 0.73
LRRC28-210ENST00000558879 FAM161BQ96MY7 647 aa19.63■□□□□ 0.73
LRRC28-210ENST00000558879 GGPS1O95749 300 aa19.62■□□□□ 0.73
LRRC28-210ENST00000558879 DNAJB2P25686 324 aa19.62■□□□□ 0.73
LRRC28-210ENST00000558879 SP2Q02086 613 aa19.62■□□□□ 0.73
LRRC28-210ENST00000558879 SEMA3FQ13275 785 aa19.62■□□□□ 0.73
LRRC28-210ENST00000558879 KRT32Q14532 448 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms