RNA–Protein interactions for RNA: ENST00000558768.5

TRPM1-208, Transcript of transient receptor potential cation channel subfamily M member 1, human

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,581 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRPM1-208	ENST00000558768	PDIA3	P30101	505 aa	Known RBP	10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	CUL4B	Q13620	913 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	TEDDM1	Q5T9Z0	273 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	SPATA1	Q5VX52	437 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	PDXDC1	Q6P996	788 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	UHMK1	Q8TAS1	419 aa	Known RBP	10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	SIKE1	Q9BRV8	207 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	TRAIP	Q9BWF2	469 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	ETNK1	Q9HBU6	452 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	CAPN11	Q9UMQ6	739 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	ADGRG1	Q9Y653	693 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	EXOC5	O00471	708 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	KCNA3	P22001	575 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	RASA3	Q14644	834 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	KIAA0825	Q8IV33	1275 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	NEK9	Q8TD19	979 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	COG1	Q8WTW3	980 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	SPATA17	Q96L03	361 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	SYBU	Q9NX95	663 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	TRAF3IP3	Q9Y228	551 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	CARMIL3	Q8ND23	1372 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	GOLGA8IP	A6NC78	632 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	ZNF189	O75820	626 aa	Predicted RBP	10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	STK10	O94804	968 aa	Known RBP	10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	DNM2	P50570	870 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	MRPL28	Q13084	256 aa	Known RBP	10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	OLFML1	Q6UWY5	402 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	LONP2	Q86WA8	852 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	C2CD5	Q86YS7	1000 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	FAM186B	Q8IYM0	893 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	DDHD1	Q8NEL9	900 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	TTLL11	Q8NHH1	800 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	CFAP36	Q96G28	342 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	RAD21L1	Q9H4I0	556 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	RHOBTB1	O94844	696 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	CTCF	P49711	727 aa	Predicted RBP	10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	STAT2	P52630	851 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	SLC12A2	P55011	1212 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	EVA1C	P58658	441 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	RAB14	P61106	215 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	KBTBD3	Q8NAB2	608 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	PITPNM3	Q9BZ71	974 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	ING2	Q9H160	280 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	PAG1	Q9NWQ8	432 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	MYOM1	P52179	1685 aa		10.48	□□□□□ -0.73
TRPM1-208	ENST00000558768	UGGT1	Q9NYU2	1555 aa		10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	SYCE1L	A8MT33	242 aa		10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768		E7EWF7	191 aa		10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	GNGT2	O14610	69 aa		10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	CAPN1	P07384	714 aa		10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	CYP21A2	P08686	494 aa		10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	EPB41	P11171	864 aa	Known RBP	10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	ADCY8	P40145	1251 aa		10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	DEFA1	P59665	94 aa		10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	DEFA3	P59666	94 aa		10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	SFSWAP	Q12872	951 aa	Known RBP	10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	STX3	Q13277	289 aa		10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	TYW1B	Q6NUM6	668 aa		10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	NLRP14	Q86W24	1093 aa		10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	ZC3H15	Q8WU90	426 aa	Known RBP	10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	SEPT3	Q9UH03	358 aa		10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	ARHGAP26	Q9UNA1	814 aa		10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	USP42	Q9H9J4	1324 aa	Known RBP	10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768		H0Y626	953 aa		10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	N4BP1	O75113	896 aa	Known RBP	10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	KRT2	P35908	639 aa		10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	DMPK	Q09013	629 aa		10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	DCAF17	Q5H9S7	520 aa	Predicted RBP	10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	KIFC2	Q96AC6	838 aa		10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	CDC5L	Q99459	802 aa	Known RBP	10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	KAT14	Q9H8E8	782 aa		10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	RWDD3	Q9Y3V2	267 aa		10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	ATP7A	Q04656	1500 aa		10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	GTPBP10	A4D1E9	387 aa	Known RBP	10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	USP14	P54578	494 aa		10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	ADCY2	Q08462	1091 aa		10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	RBL2	Q08999	1139 aa		10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	PTPN21	Q16825	1174 aa		10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	TRIM16L	Q309B1	348 aa		10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	TMEM259	Q4ZIN3	620 aa		10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	KRT40	Q6A162	431 aa		10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	TMC5	Q6UXY8	1006 aa		10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	MYLK4	Q86YV6	388 aa	Predicted RBP	10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	SGSM3	Q96HU1	749 aa		10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	MYD88	Q99836	296 aa		10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	RAB21	Q9UL25	225 aa		10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	SHPRH	Q149N8	1683 aa		10.47	□□□□□ -0.73
TRPM1-208	ENST00000558768	RNF113A	O15541	343 aa	Known RBP	10.46	□□□□□ -0.73
TRPM1-208	ENST00000558768	GGCX	P38435	758 aa		10.46	□□□□□ -0.73
TRPM1-208	ENST00000558768	KIF23	Q02241	960 aa	Predicted RBP	10.46	□□□□□ -0.73
TRPM1-208	ENST00000558768	PDE4D	Q08499	809 aa		10.46	□□□□□ -0.73
TRPM1-208	ENST00000558768	PODN	Q7Z5L7	613 aa		10.46	□□□□□ -0.73
TRPM1-208	ENST00000558768	CATSPER1	Q8NEC5	780 aa		10.46	□□□□□ -0.73
TRPM1-208	ENST00000558768	DPF2	Q92785	391 aa		10.46	□□□□□ -0.73
TRPM1-208	ENST00000558768	CCDC87	Q9NVE4	849 aa		10.46	□□□□□ -0.73
TRPM1-208	ENST00000558768	DLGAP2	Q9P1A6	1054 aa		10.46	□□□□□ -0.73
TRPM1-208	ENST00000558768	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	10.46	□□□□□ -0.73
TRPM1-208	ENST00000558768	CHMP2B	Q9UQN3	213 aa		10.46	□□□□□ -0.73
TRPM1-208	ENST00000558768	ATP8A1	Q9Y2Q0	1164 aa		10.46	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms