RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 ZBTB48P10074 688 aaPredicted RBP14.59□□□□□ -0.07
SMAD3-207ENST00000558763 CLCN1P35523 988 aa14.59□□□□□ -0.07
SMAD3-207ENST00000558763 SREBF1P36956 1147 aa14.59□□□□□ -0.07
SMAD3-207ENST00000558763 USP11P51784 963 aa14.59□□□□□ -0.07
SMAD3-207ENST00000558763 CCDC144BQ3MJ40 725 aa14.59□□□□□ -0.07
SMAD3-207ENST00000558763 RRAGBQ5VZM2 374 aa14.59□□□□□ -0.07
SMAD3-207ENST00000558763 MOXD1Q6UVY6 613 aa14.59□□□□□ -0.07
SMAD3-207ENST00000558763 CHURC1Q8WUH1 139 aa14.59□□□□□ -0.07
SMAD3-207ENST00000558763 GJA10Q969M2 543 aa14.59□□□□□ -0.07
SMAD3-207ENST00000558763 CCDC34Q96HJ3 373 aa14.59□□□□□ -0.07
SMAD3-207ENST00000558763 TTC12Q9H892 705 aaPredicted RBP14.59□□□□□ -0.07
SMAD3-207ENST00000558763 NRBP1Q9UHY1 535 aa14.59□□□□□ -0.07
SMAD3-207ENST00000558763 FEM1BQ9UK73 627 aa14.59□□□□□ -0.07
SMAD3-207ENST00000558763 RBBP6Q7Z6E9 1792 aaKnown RBP14.59□□□□□ -0.07
SMAD3-207ENST00000558763 ZNF536O15090 1300 aa14.59□□□□□ -0.07
SMAD3-207ENST00000558763 PPP1R3GB7ZBB8 358 aa14.58□□□□□ -0.07
SMAD3-207ENST00000558763 KLRC4O43908 158 aa14.58□□□□□ -0.07
SMAD3-207ENST00000558763 ZNF18P17022 549 aa14.58□□□□□ -0.07
SMAD3-207ENST00000558763 GRB10Q13322 594 aa14.58□□□□□ -0.07
SMAD3-207ENST00000558763 FAM160B2Q86V87 743 aa14.58□□□□□ -0.07
SMAD3-207ENST00000558763 SMYD4Q8IYR2 804 aaPredicted RBP14.58□□□□□ -0.07
SMAD3-207ENST00000558763 PROCA1Q8NCQ7 364 aaPredicted RBP14.58□□□□□ -0.07
SMAD3-207ENST00000558763 ZNF830Q96NB3 372 aaPredicted RBP14.58□□□□□ -0.07
SMAD3-207ENST00000558763 PNMA5Q96PV4 448 aa14.58□□□□□ -0.07
SMAD3-207ENST00000558763 PLIN2Q99541 437 aa14.58□□□□□ -0.07
SMAD3-207ENST00000558763 NUDT12Q9BQG2 462 aa14.58□□□□□ -0.07
SMAD3-207ENST00000558763 APLP1P51693 650 aa14.58□□□□□ -0.08
SMAD3-207ENST00000558763 GTF2A2P52657 109 aa14.58□□□□□ -0.08
SMAD3-207ENST00000558763 ARHGAP4P98171 946 aa14.58□□□□□ -0.08
SMAD3-207ENST00000558763 MOGSQ13724 837 aa14.58□□□□□ -0.08
SMAD3-207ENST00000558763 PDIA5Q14554 519 aa14.58□□□□□ -0.08
SMAD3-207ENST00000558763 TEX2Q8IWB9 1127 aa14.58□□□□□ -0.08
SMAD3-207ENST00000558763 ENOX1Q8TC92 643 aaKnown RBP14.58□□□□□ -0.08
SMAD3-207ENST00000558763 TBC1D5Q92609 795 aa14.58□□□□□ -0.08
SMAD3-207ENST00000558763 MS4A4AQ96JQ5 239 aa14.58□□□□□ -0.08
SMAD3-207ENST00000558763 SLF1Q9BQI6 1058 aa14.58□□□□□ -0.08
SMAD3-207ENST00000558763 BLOC1S4Q9NUP1 217 aa14.58□□□□□ -0.08
SMAD3-207ENST00000558763 PCNTO95613 3336 aa14.57□□□□□ -0.08
SMAD3-207ENST00000558763 CCL15-CCL14A0A0B4J2E2 113 aa14.57□□□□□ -0.08
SMAD3-207ENST00000558763 ERCC5P28715 1186 aaPredicted RBP14.57□□□□□ -0.08
SMAD3-207ENST00000558763 HOXA13P31271 388 aaPredicted RBP14.57□□□□□ -0.08
SMAD3-207ENST00000558763 CCL15Q16663 113 aa14.57□□□□□ -0.08
SMAD3-207ENST00000558763 CCDC174Q6PII3 467 aa14.57□□□□□ -0.08
SMAD3-207ENST00000558763 FASTKD5Q7L8L6 764 aaKnown RBP14.57□□□□□ -0.08
SMAD3-207ENST00000558763 TRMT44Q8IYL2 757 aaKnown RBP14.57□□□□□ -0.08
SMAD3-207ENST00000558763 ETNPPLQ8TBG4 499 aa14.57□□□□□ -0.08
SMAD3-207ENST00000558763 XPO4Q9C0E2 1151 aaKnown RBP14.57□□□□□ -0.08
SMAD3-207ENST00000558763 CUEDC2Q9H467 287 aa14.57□□□□□ -0.08
SMAD3-207ENST00000558763 FANCLQ9NW38 375 aa14.57□□□□□ -0.08
SMAD3-207ENST00000558763 AGTPBP1Q9UPW5 1226 aa14.57□□□□□ -0.08
SMAD3-207ENST00000558763 COL11A1P12107 1806 aaPredicted RBP14.57□□□□□ -0.08
SMAD3-207ENST00000558763 FAM86B1E9PN63 330 aa14.56□□□□□ -0.08
SMAD3-207ENST00000558763 ZNF500O60304 480 aaPredicted RBP14.56□□□□□ -0.08
SMAD3-207ENST00000558763 FOSP01100 380 aaPredicted RBP14.56□□□□□ -0.08
SMAD3-207ENST00000558763 RPN1P04843 607 aaKnown RBP14.56□□□□□ -0.08
SMAD3-207ENST00000558763 SLC10A3P09131 477 aa14.56□□□□□ -0.08
SMAD3-207ENST00000558763 FAM86B2P0C5J1 330 aa14.56□□□□□ -0.08
SMAD3-207ENST00000558763 CETPP11597 493 aa14.56□□□□□ -0.08
SMAD3-207ENST00000558763 PTGS1P23219 599 aa14.56□□□□□ -0.08
SMAD3-207ENST00000558763 CIITAP33076 1130 aa14.56□□□□□ -0.08
SMAD3-207ENST00000558763 SPIRE1Q08AE8 756 aa14.56□□□□□ -0.08
SMAD3-207ENST00000558763 CT47A1Q5JQC4 288 aaPredicted RBP14.56□□□□□ -0.08
SMAD3-207ENST00000558763 MCTP2Q6DN12 878 aa14.56□□□□□ -0.08
SMAD3-207ENST00000558763 CATSPERGQ6ZRH7 1159 aa14.56□□□□□ -0.08
SMAD3-207ENST00000558763 BRI3BPQ8WY22 251 aa14.56□□□□□ -0.08
SMAD3-207ENST00000558763 MAGEF1Q9HAY2 307 aa14.56□□□□□ -0.08
SMAD3-207ENST00000558763 LRWD1Q9UFC0 647 aa14.56□□□□□ -0.08
SMAD3-207ENST00000558763 CYP3A4P08684 503 aa14.56□□□□□ -0.08
SMAD3-207ENST00000558763 FANCCQ00597 558 aa14.56□□□□□ -0.08
SMAD3-207ENST00000558763 ECM1Q16610 540 aa14.56□□□□□ -0.08
SMAD3-207ENST00000558763 Q4G0T1 1027 aa14.56□□□□□ -0.08
SMAD3-207ENST00000558763 TMEM119Q4V9L6 283 aa14.56□□□□□ -0.08
SMAD3-207ENST00000558763 CYP4F22Q6NT55 531 aa14.56□□□□□ -0.08
SMAD3-207ENST00000558763 PRPF38AQ8NAV1 312 aaKnown RBP14.56□□□□□ -0.08
SMAD3-207ENST00000558763 NAP1L4Q99733 375 aaKnown RBP14.56□□□□□ -0.08
SMAD3-207ENST00000558763 CREBZFQ9NS37 354 aa14.56□□□□□ -0.08
SMAD3-207ENST00000558763 IFNKQ9P0W0 207 aa14.56□□□□□ -0.08
SMAD3-207ENST00000558763 DACH1Q9UI36 760 aa14.56□□□□□ -0.08
SMAD3-207ENST00000558763 PPP1R9AQ9ULJ8 1098 aa14.56□□□□□ -0.08
SMAD3-207ENST00000558763 NFE2L3Q9Y4A8 694 aa14.56□□□□□ -0.08
SMAD3-207ENST00000558763 FAM155AB1AL88 458 aaPredicted RBP14.55□□□□□ -0.08
SMAD3-207ENST00000558763 MYL1P05976 194 aa14.55□□□□□ -0.08
SMAD3-207ENST00000558763 TMEM266Q2M3C6 531 aa14.55□□□□□ -0.08
SMAD3-207ENST00000558763 GPAT2Q6NUI2 795 aa14.55□□□□□ -0.08
SMAD3-207ENST00000558763 CCDC186Q7Z3E2 898 aa14.55□□□□□ -0.08
SMAD3-207ENST00000558763 KCNK18Q7Z418 384 aa14.55□□□□□ -0.08
SMAD3-207ENST00000558763 ATG4CQ96DT6 458 aa14.55□□□□□ -0.08
SMAD3-207ENST00000558763 TRIM9Q9C026 710 aa14.55□□□□□ -0.08
SMAD3-207ENST00000558763 INTS13Q9NVM9 706 aa14.55□□□□□ -0.08
SMAD3-207ENST00000558763 IGLV3-22A0A075B6J6 115 aa14.54□□□□□ -0.08
SMAD3-207ENST00000558763 SPDYE3A6NKU9 549 aa14.54□□□□□ -0.08
SMAD3-207ENST00000558763 ICAM1P05362 532 aa14.54□□□□□ -0.08
SMAD3-207ENST00000558763 IRX3P78415 501 aaPredicted RBP14.54□□□□□ -0.08
SMAD3-207ENST00000558763 HTRA3P83110 453 aa14.54□□□□□ -0.08
SMAD3-207ENST00000558763 KCNB1Q14721 858 aa14.54□□□□□ -0.08
SMAD3-207ENST00000558763 COG2Q14746 738 aa14.54□□□□□ -0.08
SMAD3-207ENST00000558763 HYIQ5T013 277 aa14.54□□□□□ -0.08
SMAD3-207ENST00000558763 RASSF8Q8NHQ8 419 aa14.54□□□□□ -0.08
SMAD3-207ENST00000558763 GDAQ9Y2T3 454 aa14.54□□□□□ -0.08
SMAD3-207ENST00000558763 SPDYE16A6NNV3 312 aaPredicted RBP14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms