RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 NECAB3Q96P71 396 aaPredicted RBP13.42□□□□□ -0.26
CASC4-205ENST00000558735 IWS1Q96ST2 819 aa13.42□□□□□ -0.26
CASC4-205ENST00000558735 RMDN3Q96TC7 470 aa13.42□□□□□ -0.26
CASC4-205ENST00000558735 GPHNQ9NQX3 736 aaPredicted RBP13.42□□□□□ -0.26
CASC4-205ENST00000558735 TRMT13Q9NUP7 481 aaKnown RBP13.42□□□□□ -0.26
CASC4-205ENST00000558735 COG5Q9UP83 839 aa13.42□□□□□ -0.26
CASC4-205ENST00000558735 RAD50Q92878 1312 aa13.41□□□□□ -0.26
CASC4-205ENST00000558735 E7EWF7 191 aa13.41□□□□□ -0.26
CASC4-205ENST00000558735 IFIT3O14879 490 aaKnown RBP13.41□□□□□ -0.26
CASC4-205ENST00000558735 KPNA6O60684 536 aa13.41□□□□□ -0.26
CASC4-205ENST00000558735 CFBP00751 764 aa13.41□□□□□ -0.26
CASC4-205ENST00000558735 ATP2A2P16615 1042 aaKnown RBP13.41□□□□□ -0.26
CASC4-205ENST00000558735 RABGGTBP53611 331 aa13.41□□□□□ -0.26
CASC4-205ENST00000558735 TFF2Q03403 129 aa13.41□□□□□ -0.26
CASC4-205ENST00000558735 TRDNQ13061 729 aa13.41□□□□□ -0.26
CASC4-205ENST00000558735 STXBP2Q15833 593 aa13.41□□□□□ -0.26
CASC4-205ENST00000558735 LY6KQ17RY6 165 aa13.41□□□□□ -0.26
CASC4-205ENST00000558735 BRDTQ58F21 947 aaPredicted RBP13.41□□□□□ -0.26
CASC4-205ENST00000558735 CHST3Q7LGC8 479 aa13.41□□□□□ -0.26
CASC4-205ENST00000558735 AMNQ9BXJ7 453 aa13.41□□□□□ -0.26
CASC4-205ENST00000558735 MTCH2Q9Y6C9 303 aa13.41□□□□□ -0.26
CASC4-205ENST00000558735 LRRC37A2A6NM11 1700 aa13.41□□□□□ -0.26
CASC4-205ENST00000558735 ZBTB5O15062 677 aa13.4□□□□□ -0.26
CASC4-205ENST00000558735 TLL1O43897 1013 aa13.4□□□□□ -0.26
CASC4-205ENST00000558735 EIF3JO75822 258 aaKnown RBP13.4□□□□□ -0.26
CASC4-205ENST00000558735 NR3C2P08235 984 aa13.4□□□□□ -0.26
CASC4-205ENST00000558735 SUPT20HL2P0C7V6 817 aa13.4□□□□□ -0.26
CASC4-205ENST00000558735 HSD17B4P51659 736 aa13.4□□□□□ -0.26
CASC4-205ENST00000558735 KCNQ1P51787 676 aa13.4□□□□□ -0.26
CASC4-205ENST00000558735 GHRHRQ02643 423 aa13.4□□□□□ -0.26
CASC4-205ENST00000558735 ARHGEF16Q5VV41 709 aa13.4□□□□□ -0.26
CASC4-205ENST00000558735 STOX1Q6ZVD7 989 aa13.4□□□□□ -0.26
CASC4-205ENST00000558735 IGDCC4Q8TDY8 1250 aa13.4□□□□□ -0.26
CASC4-205ENST00000558735 AFG1LQ8WV93 481 aa13.4□□□□□ -0.26
CASC4-205ENST00000558735 SCLYQ96I15 445 aa13.4□□□□□ -0.26
CASC4-205ENST00000558735 LRFN3Q9BTN0 628 aa13.4□□□□□ -0.26
CASC4-205ENST00000558735 RIOX1Q9H6W3 641 aa13.4□□□□□ -0.26
CASC4-205ENST00000558735 PXMP2Q9NR77 195 aa13.4□□□□□ -0.26
CASC4-205ENST00000558735 DDX41Q9UJV9 622 aaKnown RBP13.4□□□□□ -0.26
CASC4-205ENST00000558735 PCDHA1Q9Y5I3 950 aa13.4□□□□□ -0.26
CASC4-205ENST00000558735 GBF1Q92538 1859 aa13.4□□□□□ -0.26
CASC4-205ENST00000558735 CYTH3O43739 400 aa13.39□□□□□ -0.27
CASC4-205ENST00000558735 MYOGP15173 224 aa13.39□□□□□ -0.27
CASC4-205ENST00000558735 EIF2AK2P19525 551 aaKnown RBP13.39□□□□□ -0.27
CASC4-205ENST00000558735 ANTXR2P58335 489 aa13.39□□□□□ -0.27
CASC4-205ENST00000558735 ARHGAP1Q07960 439 aa13.39□□□□□ -0.27
CASC4-205ENST00000558735 TROAPQ12815 778 aa13.39□□□□□ -0.27
CASC4-205ENST00000558735 GRM4Q14833 912 aa13.39□□□□□ -0.27
CASC4-205ENST00000558735 FAM47CQ5HY64 1035 aa13.39□□□□□ -0.27
CASC4-205ENST00000558735 TMEM67Q5HYA8 995 aa13.39□□□□□ -0.27
CASC4-205ENST00000558735 NFRKBQ6P4R8 1299 aa13.39□□□□□ -0.27
CASC4-205ENST00000558735 NCOA7Q8NI08 942 aa13.39□□□□□ -0.27
CASC4-205ENST00000558735 PHOSPHO2Q8TCD6 241 aa13.39□□□□□ -0.27
CASC4-205ENST00000558735 PIGSQ96S52 555 aa13.39□□□□□ -0.27
CASC4-205ENST00000558735 MAP3K20Q9NYL2 800 aaKnown RBP13.39□□□□□ -0.27
CASC4-205ENST00000558735 LAMA4Q16363 1823 aa13.39□□□□□ -0.27
CASC4-205ENST00000558735 GTPBP6O43824 516 aaPredicted RBP13.38□□□□□ -0.27
CASC4-205ENST00000558735 RGS20O76081 388 aa13.38□□□□□ -0.27
CASC4-205ENST00000558735 GH1P01241 217 aa13.38□□□□□ -0.27
CASC4-205ENST00000558735 PTPN11Q06124 597 aaPredicted RBP13.38□□□□□ -0.27
CASC4-205ENST00000558735 WTAPQ15007 396 aa13.38□□□□□ -0.27
CASC4-205ENST00000558735 VSIG10LQ86VR7 867 aa13.38□□□□□ -0.27
CASC4-205ENST00000558735 KAT2BQ92831 832 aa13.38□□□□□ -0.27
CASC4-205ENST00000558735 EPHX3Q9H6B9 360 aa13.38□□□□□ -0.27
CASC4-205ENST00000558735 HCN4Q9Y3Q4 1203 aa13.38□□□□□ -0.27
CASC4-205ENST00000558735 PRRC2BQ5JSZ5 2229 aaKnown RBP13.37□□□□□ -0.27
CASC4-205ENST00000558735 ERICH2A1L162 156 aa13.37□□□□□ -0.27
CASC4-205ENST00000558735 GPR37L1O60883 481 aa13.37□□□□□ -0.27
CASC4-205ENST00000558735 CA3P07451 260 aa13.37□□□□□ -0.27
CASC4-205ENST00000558735 MMP3P08254 477 aa13.37□□□□□ -0.27
CASC4-205ENST00000558735 HOXA13P31271 388 aaPredicted RBP13.37□□□□□ -0.27
CASC4-205ENST00000558735 RFC2P35250 354 aa13.37□□□□□ -0.27
CASC4-205ENST00000558735 TMEM31Q5JXX7 168 aa13.37□□□□□ -0.27
CASC4-205ENST00000558735 RALYLQ86SE5 291 aaKnown RBP13.37□□□□□ -0.27
CASC4-205ENST00000558735 HOMER1Q86YM7 354 aa13.37□□□□□ -0.27
CASC4-205ENST00000558735 MB21D2Q8IYB1 491 aaPredicted RBP13.37□□□□□ -0.27
CASC4-205ENST00000558735 SAMD3Q8N6K7 520 aa13.37□□□□□ -0.27
CASC4-205ENST00000558735 CTAGE1Q96RT6 745 aa13.37□□□□□ -0.27
CASC4-205ENST00000558735 SLC9A7Q96T83 725 aa13.37□□□□□ -0.27
CASC4-205ENST00000558735 PDCD2LQ9BRP1 358 aa13.37□□□□□ -0.27
CASC4-205ENST00000558735 RBM8AQ9Y5S9 174 aaKnown RBP13.37□□□□□ -0.27
CASC4-205ENST00000558735 TCF20Q9UGU0 1960 aaKnown RBP13.36□□□□□ -0.27
CASC4-205ENST00000558735 SCN10AQ9Y5Y9 1956 aa13.36□□□□□ -0.27
CASC4-205ENST00000558735 PNMA6FA0A0J9YX94 578 aa13.36□□□□□ -0.27
CASC4-205ENST00000558735 ZBBXA8MT70 800 aa13.36□□□□□ -0.27
CASC4-205ENST00000558735 IQCF3P0C7M6 154 aa13.36□□□□□ -0.27
CASC4-205ENST00000558735 MYCLP12524 364 aaPredicted RBP13.36□□□□□ -0.27
CASC4-205ENST00000558735 CASTP20810 708 aaKnown RBP13.36□□□□□ -0.27
CASC4-205ENST00000558735 CHMP4BP1P59074 171 aa13.36□□□□□ -0.27
CASC4-205ENST00000558735 SP2Q02086 613 aa13.36□□□□□ -0.27
CASC4-205ENST00000558735 TAP1Q03518 808 aa13.36□□□□□ -0.27
CASC4-205ENST00000558735 COL9A3Q14050 684 aaPredicted RBP13.36□□□□□ -0.27
CASC4-205ENST00000558735 DEFB128Q7Z7B8 93 aa13.36□□□□□ -0.27
CASC4-205ENST00000558735 MICALL1Q8N3F8 863 aa13.36□□□□□ -0.27
CASC4-205ENST00000558735 IL31RAQ8NI17 732 aa13.36□□□□□ -0.27
CASC4-205ENST00000558735 EMID1Q96A84 441 aaPredicted RBP13.36□□□□□ -0.27
CASC4-205ENST00000558735 ZFP91Q96JP5 570 aaPredicted RBP13.36□□□□□ -0.27
CASC4-205ENST00000558735 BAZ2BQ9UIF8 2168 aaKnown RBP13.36□□□□□ -0.27
CASC4-205ENST00000558735 EPOPA6NHQ4 379 aa13.35□□□□□ -0.27
CASC4-205ENST00000558735 GCOM1H8Y6P7 765 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms