RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 GIMAP6Q6P9H5 292 aa8.03□□□□□ -1.12
LRRC28-207ENST00000558500 EP400NLQ6ZTU2 488 aa8.03□□□□□ -1.12
LRRC28-207ENST00000558500 BMP8AQ7Z5Y6 402 aa8.03□□□□□ -1.12
LRRC28-207ENST00000558500 ZNF444Q8N0Y2 327 aaPredicted RBP8.03□□□□□ -1.12
LRRC28-207ENST00000558500 CLASRPQ8N2M8 674 aaKnown RBP8.03□□□□□ -1.12
LRRC28-207ENST00000558500 DHX38Q92620 1227 aaKnown RBP8.03□□□□□ -1.12
LRRC28-207ENST00000558500 GMCL1Q96IK5 515 aa8.03□□□□□ -1.12
LRRC28-207ENST00000558500 STRBPQ96SI9 672 aaKnown RBP8.03□□□□□ -1.12
LRRC28-207ENST00000558500 PRRX2Q99811 253 aa8.03□□□□□ -1.12
LRRC28-207ENST00000558500 BOLA2Q9H3K6 86 aa8.03□□□□□ -1.12
LRRC28-207ENST00000558500 MUTYHQ9UIF7 546 aa8.03□□□□□ -1.12
LRRC28-207ENST00000558500 INSL6Q9Y581 213 aa8.03□□□□□ -1.12
LRRC28-207ENST00000558500 MINDY4BA8MYZ0 360 aa8.02□□□□□ -1.13
LRRC28-207ENST00000558500 H3BNC9 293 aa8.02□□□□□ -1.13
LRRC28-207ENST00000558500 GFRA3O60609 400 aa8.02□□□□□ -1.13
LRRC28-207ENST00000558500 ICAM1P05362 532 aa8.02□□□□□ -1.13
LRRC28-207ENST00000558500 CKBP12277 381 aa8.02□□□□□ -1.13
LRRC28-207ENST00000558500 ATP5JP18859 108 aa8.02□□□□□ -1.13
LRRC28-207ENST00000558500 SLC1A4P43007 532 aa8.02□□□□□ -1.13
LRRC28-207ENST00000558500 CHMP4BP1P59074 171 aa8.02□□□□□ -1.13
LRRC28-207ENST00000558500 HTRA4P83105 476 aaPredicted RBP8.02□□□□□ -1.13
LRRC28-207ENST00000558500 TCF15Q12870 199 aa8.02□□□□□ -1.13
LRRC28-207ENST00000558500 BAATQ14032 418 aaPredicted RBP8.02□□□□□ -1.13
LRRC28-207ENST00000558500 PKN1Q16512 942 aa8.02□□□□□ -1.13
LRRC28-207ENST00000558500 EPC2Q52LR7 807 aa8.02□□□□□ -1.13
LRRC28-207ENST00000558500 GDF6Q6KF10 455 aaPredicted RBP8.02□□□□□ -1.13
LRRC28-207ENST00000558500 ZSCAN25Q6NSZ9 544 aa8.02□□□□□ -1.13
LRRC28-207ENST00000558500 SESTD1Q86VW0 696 aa8.02□□□□□ -1.13
LRRC28-207ENST00000558500 RNF135Q8IUD6 432 aa8.02□□□□□ -1.13
LRRC28-207ENST00000558500 NEDD1Q8NHV4 660 aa8.02□□□□□ -1.13
LRRC28-207ENST00000558500 SCFD2Q8WU76 684 aa8.02□□□□□ -1.13
LRRC28-207ENST00000558500 EDAQ92838 391 aa8.02□□□□□ -1.13
LRRC28-207ENST00000558500 COPS5Q92905 334 aa8.02□□□□□ -1.13
LRRC28-207ENST00000558500 SAMD11Q96NU1 681 aa8.02□□□□□ -1.13
LRRC28-207ENST00000558500 POP1Q99575 1024 aaKnown RBP8.02□□□□□ -1.13
LRRC28-207ENST00000558500 HAUS7Q99871 368 aa8.02□□□□□ -1.13
LRRC28-207ENST00000558500 NSUN3Q9H649 340 aaKnown RBP8.02□□□□□ -1.13
LRRC28-207ENST00000558500 ZNF287Q9HBT7 754 aa8.02□□□□□ -1.13
LRRC28-207ENST00000558500 CLDND1Q9NY35 253 aa8.02□□□□□ -1.13
LRRC28-207ENST00000558500 CCPG1Q9ULG6 757 aa8.02□□□□□ -1.13
LRRC28-207ENST00000558500 PRR12Q9ULL5 1215 aa8.02□□□□□ -1.13
LRRC28-207ENST00000558500 WDFY4Q6ZS81 3184 aa8.02□□□□□ -1.13
LRRC28-207ENST00000558500 GREB1LQ9C091 1923 aaPredicted RBP8.01□□□□□ -1.13
LRRC28-207ENST00000558500 PLIN4Q96Q06 1357 aa8.01□□□□□ -1.13
LRRC28-207ENST00000558500 MCM3APO60318 1980 aa8.01□□□□□ -1.13
LRRC28-207ENST00000558500 ZNF316A6NFI3 1004 aaPredicted RBP8.01□□□□□ -1.13
LRRC28-207ENST00000558500 RBAK-RBAKDNI3L0D1 243 aa8.01□□□□□ -1.13
LRRC28-207ENST00000558500 NFIBO00712 420 aa8.01□□□□□ -1.13
LRRC28-207ENST00000558500 NCK2O43639 380 aa8.01□□□□□ -1.13
LRRC28-207ENST00000558500 LGR5O75473 907 aa8.01□□□□□ -1.13
LRRC28-207ENST00000558500 TXNP10599 105 aaKnown RBP8.01□□□□□ -1.13
LRRC28-207ENST00000558500 MCCP23508 829 aa8.01□□□□□ -1.13
LRRC28-207ENST00000558500 EDNRBP24530 442 aa8.01□□□□□ -1.13
LRRC28-207ENST00000558500 PDE4AP27815 886 aa8.01□□□□□ -1.13
LRRC28-207ENST00000558500 LTBRP36941 435 aa8.01□□□□□ -1.13
LRRC28-207ENST00000558500 PDE4DQ08499 809 aa8.01□□□□□ -1.13
LRRC28-207ENST00000558500 GPM6BQ13491 265 aa8.01□□□□□ -1.13
LRRC28-207ENST00000558500 RCSD1Q6JBY9 416 aa8.01□□□□□ -1.13
LRRC28-207ENST00000558500 TRAF7Q6Q0C0 670 aa8.01□□□□□ -1.13
LRRC28-207ENST00000558500 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.01□□□□□ -1.13
LRRC28-207ENST00000558500 TRIM67Q6ZTA4 783 aa8.01□□□□□ -1.13
LRRC28-207ENST00000558500 KCTD1Q719H9 257 aa8.01□□□□□ -1.13
LRRC28-207ENST00000558500 RPAINQ86UA6 219 aa8.01□□□□□ -1.13
LRRC28-207ENST00000558500 ITPRIPQ8IWB1 547 aa8.01□□□□□ -1.13
LRRC28-207ENST00000558500 FTSJ3Q8IY81 847 aaKnown RBP8.01□□□□□ -1.13
LRRC28-207ENST00000558500 KAT2BQ92831 832 aa8.01□□□□□ -1.13
LRRC28-207ENST00000558500 PBXIP1Q96AQ6 731 aa8.01□□□□□ -1.13
LRRC28-207ENST00000558500 CHMP4CQ96CF2 233 aa8.01□□□□□ -1.13
LRRC28-207ENST00000558500 KIF1BPQ96EK5 621 aa8.01□□□□□ -1.13
LRRC28-207ENST00000558500 EPB41L4AQ9HCS5 686 aaPredicted RBP8.01□□□□□ -1.13
LRRC28-207ENST00000558500 SCN5AQ14524 2016 aa8.01□□□□□ -1.13
LRRC28-207ENST00000558500 USP34Q70CQ2 3546 aa8.01□□□□□ -1.13
LRRC28-207ENST00000558500 PTPDC1A2A3K4 754 aa8□□□□□ -1.13
LRRC28-207ENST00000558500 TMEM221A6NGB7 291 aa8□□□□□ -1.13
LRRC28-207ENST00000558500 M0R296 226 aa8□□□□□ -1.13
LRRC28-207ENST00000558500 MBTPS2O43462 519 aa8□□□□□ -1.13
LRRC28-207ENST00000558500 ARIH2O95376 493 aa8□□□□□ -1.13
LRRC28-207ENST00000558500 AMHP03971 560 aa8□□□□□ -1.13
LRRC28-207ENST00000558500 TSPY3P0CV98 308 aa8□□□□□ -1.13
LRRC28-207ENST00000558500 TSPY8P0CW00 308 aa8□□□□□ -1.13
LRRC28-207ENST00000558500 RLBP1P12271 317 aa8□□□□□ -1.13
LRRC28-207ENST00000558500 TDO2P48775 406 aa8□□□□□ -1.13
LRRC28-207ENST00000558500 PDE4BQ07343 736 aa8□□□□□ -1.13
LRRC28-207ENST00000558500 PTK7Q13308 1070 aa8□□□□□ -1.13
LRRC28-207ENST00000558500 MBTPS1Q14703 1052 aa8□□□□□ -1.13
LRRC28-207ENST00000558500 CLUL1Q15846 466 aa8□□□□□ -1.13
LRRC28-207ENST00000558500 CTC1Q2NKJ3 1217 aa8□□□□□ -1.13
LRRC28-207ENST00000558500 TRIM71Q2Q1W2 868 aaKnown RBP8□□□□□ -1.13
LRRC28-207ENST00000558500 ZNF618Q5T7W0 954 aa8□□□□□ -1.13
LRRC28-207ENST00000558500 SLC30A10Q6XR72 485 aa8□□□□□ -1.13
LRRC28-207ENST00000558500 FBXO11Q86XK2 927 aa8□□□□□ -1.13
LRRC28-207ENST00000558500 SUGP1Q8IWZ8 645 aaKnown RBP8□□□□□ -1.13
LRRC28-207ENST00000558500 TMEM192Q8IY95 271 aa8□□□□□ -1.13
LRRC28-207ENST00000558500 MYOCDQ8IZQ8 938 aa8□□□□□ -1.13
LRRC28-207ENST00000558500 AFG1LQ8WV93 481 aa8□□□□□ -1.13
LRRC28-207ENST00000558500 BCL11AQ9H165 835 aa8□□□□□ -1.13
LRRC28-207ENST00000558500 ALG13Q9NP73 1137 aaKnown RBP8□□□□□ -1.13
LRRC28-207ENST00000558500 FAM86C1Q9NVL1 165 aa8□□□□□ -1.13
LRRC28-207ENST00000558500 GTF2IRD1Q9UHL9 959 aa8□□□□□ -1.13
LRRC28-207ENST00000558500 PTPRZ1P23471 2315 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms