RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 CCDC159P0C7I6 412 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 TCP1P17987 556 aaKnown RBP6.07□□□□□ -1.44
GABPB1-207ENST00000558335 NAT1P18440 290 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 TRIM21P19474 475 aaKnown RBP6.07□□□□□ -1.44
GABPB1-207ENST00000558335 RXRAP19793 462 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 BMP6P22004 513 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 ANXA13P27216 316 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 TPP2P29144 1249 aaPredicted RBP6.07□□□□□ -1.44
GABPB1-207ENST00000558335 HIBADHP31937 336 aaKnown RBP6.07□□□□□ -1.44
GABPB1-207ENST00000558335 CASP14P31944 242 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 SLC8A1P32418 973 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 GCKP35557 465 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 PAFAH1B1P43034 410 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 AFMP43652 599 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 PLA2G4AP47712 749 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 HDLBPQ00341 1268 aaKnown RBP6.07□□□□□ -1.44
GABPB1-207ENST00000558335 LRRC63Q05C16 580 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 FMR1Q06787 632 aaKnown RBP eCLIP6.07□□□□□ -1.44
GABPB1-207ENST00000558335 FUT2Q10981 343 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 NR5A1Q13285 461 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 DYNC1I2Q13409 638 aaKnown RBP6.07□□□□□ -1.44
GABPB1-207ENST00000558335 KRT31Q15323 416 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 PKN1Q16512 942 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 DDB1Q16531 1140 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 VWA3BQ502W6 1294 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 CCDC92Q53HC0 331 aaPredicted RBP6.07□□□□□ -1.44
GABPB1-207ENST00000558335 C10orf76Q5T2E6 689 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 RC3H1Q5TC82 1133 aaKnown RBP6.07□□□□□ -1.44
GABPB1-207ENST00000558335 SUSD4Q5VX71 490 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 PPP1R18Q6NYC8 613 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 PDXDC2PQ6P474 469 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 PI16Q6UXB8 463 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 TOGARAM2Q6ZUX3 1019 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 FBXO33Q7Z6M2 555 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 DZIP1Q86YF9 867 aaKnown RBP6.07□□□□□ -1.44
GABPB1-207ENST00000558335 RAB11FIP4Q86YS3 637 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 LRRC49Q8IUZ0 686 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 ZNF444Q8N0Y2 327 aaPredicted RBP6.07□□□□□ -1.44
GABPB1-207ENST00000558335 ADSSL1Q8N142 457 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 RNF10Q8N5U6 811 aaKnown RBP6.07□□□□□ -1.44
GABPB1-207ENST00000558335 MB21D1Q8N884 522 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 MIGA1Q8NAN2 632 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 GIMAP8Q8ND71 665 aaPredicted RBP6.07□□□□□ -1.44
GABPB1-207ENST00000558335 N4BP2L2Q92802 583 aaPredicted RBP6.07□□□□□ -1.44
GABPB1-207ENST00000558335 TNFRSF25Q93038 417 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 RSRC1Q96IZ7 334 aaKnown RBP6.07□□□□□ -1.44
GABPB1-207ENST00000558335 CDK5RAP3Q96JB5 506 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 TRIM47Q96LD4 638 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 AIFM3Q96NN9 605 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 NLRP3Q96P20 1036 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 NAP1L3Q99457 506 aaPredicted RBP6.07□□□□□ -1.44
GABPB1-207ENST00000558335 RIOK1Q9BRS2 568 aaKnown RBP6.07□□□□□ -1.44
GABPB1-207ENST00000558335 SPZ1Q9BXG8 430 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 FUT8Q9BYC5 575 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 MKNK2Q9HBH9 465 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 RIC8AQ9NPQ8 531 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 LZTFL1Q9NQ48 299 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 SAMSN1Q9NSI8 373 aaKnown RBP6.07□□□□□ -1.44
GABPB1-207ENST00000558335 INTS13Q9NVM9 706 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 BTG4Q9NY30 223 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 VPS54Q9P1Q0 977 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 LCMT1Q9UIC8 334 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 CTNND2Q9UQB3 1225 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.07□□□□□ -1.44
GABPB1-207ENST00000558335 LEMD3Q9Y2U8 911 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 DAAM1Q9Y4D1 1078 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 COL5A3P25940 1745 aaPredicted RBP6.07□□□□□ -1.44
GABPB1-207ENST00000558335 MYH8P13535 1937 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 CACNA1SQ13698 1873 aa6.07□□□□□ -1.44
GABPB1-207ENST00000558335 NUTM2BA6NNL0 878 aaPredicted RBP6.06□□□□□ -1.44
GABPB1-207ENST00000558335 NUTM2EB1AL46 878 aaPredicted RBP6.06□□□□□ -1.44
GABPB1-207ENST00000558335 GOLGA8KD6RF30 607 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 DTNBO60941 627 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 CAMTA2O94983 1202 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 GYPCP04921 128 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 PARP1P09874 1014 aaKnown RBP6.06□□□□□ -1.44
GABPB1-207ENST00000558335 SRGNP10124 158 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 ZFXP17010 805 aaPredicted RBP6.06□□□□□ -1.44
GABPB1-207ENST00000558335 CCNE1P24864 410 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 STIP1P31948 543 aaKnown RBP6.06□□□□□ -1.44
GABPB1-207ENST00000558335 CRKLP46109 303 aaKnown RBP6.06□□□□□ -1.44
GABPB1-207ENST00000558335 AARSP49588 968 aaKnown RBP eCLIP6.06□□□□□ -1.44
GABPB1-207ENST00000558335 BCAMP50895 628 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 FOXD4Q12950 439 aaPredicted RBP6.06□□□□□ -1.44
GABPB1-207ENST00000558335 PPFIA1Q13136 1202 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 NNTQ13423 1086 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 PRPF4BQ13523 1007 aaKnown RBP6.06□□□□□ -1.44
GABPB1-207ENST00000558335 GRM4Q14833 912 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 PLCB4Q15147 1175 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 NONOQ15233 471 aaKnown RBP eCLIP6.06□□□□□ -1.44
GABPB1-207ENST00000558335 ZNF174Q15697 407 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 MEA1Q16626 185 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 LRRC23Q53EV4 343 aaPredicted RBP6.06□□□□□ -1.44
GABPB1-207ENST00000558335 BEND6Q5SZJ8 279 aaPredicted RBP6.06□□□□□ -1.44
GABPB1-207ENST00000558335 CCDC122Q5T0U0 273 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 PAPD7Q5XG87 772 aaKnown RBP6.06□□□□□ -1.44
GABPB1-207ENST00000558335 ALS2CLQ60I27 953 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 TPTE2Q6XPS3 522 aa6.06□□□□□ -1.44
GABPB1-207ENST00000558335 APTXQ7Z2E3 356 aaKnown RBP6.06□□□□□ -1.44
GABPB1-207ENST00000558335 TMC4Q7Z404 712 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms