RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 ZNF76P36508 570 aa10.29□□□□□ -0.76
SPG11-207ENST00000558138 ACLYP53396 1101 aa10.29□□□□□ -0.76
SPG11-207ENST00000558138 GJA9P57773 515 aa10.29□□□□□ -0.76
SPG11-207ENST00000558138 NLRP5P59047 1200 aa10.29□□□□□ -0.76
SPG11-207ENST00000558138 SCRN1Q12765 414 aa10.29□□□□□ -0.76
SPG11-207ENST00000558138 LY6KQ17RY6 165 aa10.29□□□□□ -0.76
SPG11-207ENST00000558138 NLRX1Q86UT6 975 aa10.29□□□□□ -0.76
SPG11-207ENST00000558138 BICD2Q8TD16 824 aa10.29□□□□□ -0.76
SPG11-207ENST00000558138 COPS5Q92905 334 aa10.29□□□□□ -0.76
SPG11-207ENST00000558138 TSEN34Q9BSV6 310 aaKnown RBP10.29□□□□□ -0.76
SPG11-207ENST00000558138 RIC8AQ9NPQ8 531 aa10.29□□□□□ -0.76
SPG11-207ENST00000558138 PRDM5Q9NQX1 630 aaPredicted RBP10.29□□□□□ -0.76
SPG11-207ENST00000558138 VPS54Q9P1Q0 977 aa10.29□□□□□ -0.76
SPG11-207ENST00000558138 TPCN1Q9ULQ1 816 aa10.29□□□□□ -0.76
SPG11-207ENST00000558138 PCDHA6Q9UN73 950 aa10.29□□□□□ -0.76
SPG11-207ENST00000558138 PHF24Q9UPV7 400 aa10.29□□□□□ -0.76
SPG11-207ENST00000558138 PCDHA8Q9Y5H6 950 aa10.29□□□□□ -0.76
SPG11-207ENST00000558138 PIK3CDO00329 1044 aa10.28□□□□□ -0.76
SPG11-207ENST00000558138 NOP56O00567 594 aaKnown RBP10.28□□□□□ -0.76
SPG11-207ENST00000558138 MEIS2O14770 477 aa10.28□□□□□ -0.76
SPG11-207ENST00000558138 PFKFB2O60825 505 aa10.28□□□□□ -0.76
SPG11-207ENST00000558138 PQBP1O60828 265 aaKnown RBP10.28□□□□□ -0.76
SPG11-207ENST00000558138 ADAMTS4O75173 837 aa10.28□□□□□ -0.76
SPG11-207ENST00000558138 STAM2O75886 525 aa10.28□□□□□ -0.76
SPG11-207ENST00000558138 ASGR1P07306 291 aa10.28□□□□□ -0.76
SPG11-207ENST00000558138 PTGS1P23219 599 aa10.28□□□□□ -0.76
SPG11-207ENST00000558138 MNX1P50219 401 aaPredicted RBP10.28□□□□□ -0.76
SPG11-207ENST00000558138 FOSBP53539 338 aa10.28□□□□□ -0.76
SPG11-207ENST00000558138 EVCP57679 992 aa10.28□□□□□ -0.76
SPG11-207ENST00000558138 GHRHRQ02643 423 aa10.28□□□□□ -0.76
SPG11-207ENST00000558138 FUT2Q10981 343 aa10.28□□□□□ -0.76
SPG11-207ENST00000558138 LRRC26Q2I0M4 334 aa10.28□□□□□ -0.76
SPG11-207ENST00000558138 JAKMIP3Q5VZ66 844 aa10.28□□□□□ -0.76
SPG11-207ENST00000558138 KCNV1Q6PIU1 500 aa10.28□□□□□ -0.76
SPG11-207ENST00000558138 UBE2Q1Q7Z7E8 422 aa10.28□□□□□ -0.76
SPG11-207ENST00000558138 DHX37Q8IY37 1157 aaKnown RBP10.28□□□□□ -0.76
SPG11-207ENST00000558138 REXO1Q8N1G1 1221 aaKnown RBP10.28□□□□□ -0.76
SPG11-207ENST00000558138 NECAB1Q8N987 351 aa10.28□□□□□ -0.76
SPG11-207ENST00000558138 IL31RAQ8NI17 732 aa10.28□□□□□ -0.76
SPG11-207ENST00000558138 WASF1Q92558 559 aa10.28□□□□□ -0.76
SPG11-207ENST00000558138 PGBD1Q96JS3 809 aa10.28□□□□□ -0.76
SPG11-207ENST00000558138 UPF3AQ9H1J1 476 aaKnown RBP10.28□□□□□ -0.76
SPG11-207ENST00000558138 MLXIPQ9HAP2 919 aa10.28□□□□□ -0.76
SPG11-207ENST00000558138 POLR3EQ9NVU0 708 aa10.28□□□□□ -0.76
SPG11-207ENST00000558138 TMEM260Q9NX78 707 aa10.28□□□□□ -0.76
SPG11-207ENST00000558138 ZMYND8Q9ULU4 1186 aaPredicted RBP10.28□□□□□ -0.76
SPG11-207ENST00000558138 GNEQ9Y223 722 aaKnown RBP10.28□□□□□ -0.76
SPG11-207ENST00000558138 Q9Y3F1 56 aa10.28□□□□□ -0.76
SPG11-207ENST00000558138 A0A0U1RQG5 324 aaPredicted RBP10.27□□□□□ -0.77
SPG11-207ENST00000558138 RBM47A0AV96 593 aaKnown RBP10.27□□□□□ -0.77
SPG11-207ENST00000558138 ARIH2O95376 493 aa10.27□□□□□ -0.77
SPG11-207ENST00000558138 FOSP01100 380 aaPredicted RBP10.27□□□□□ -0.77
SPG11-207ENST00000558138 COL6A1P12109 1028 aa10.27□□□□□ -0.77
SPG11-207ENST00000558138 SYN1P17600 705 aa10.27□□□□□ -0.77
SPG11-207ENST00000558138 CST5P28325 142 aaPredicted RBP10.27□□□□□ -0.77
SPG11-207ENST00000558138 RTP1P59025 263 aa10.27□□□□□ -0.77
SPG11-207ENST00000558138 IRX5P78411 483 aaPredicted RBP10.27□□□□□ -0.77
SPG11-207ENST00000558138 SP4Q02446 784 aa10.27□□□□□ -0.77
SPG11-207ENST00000558138 AP3B2Q13367 1082 aa10.27□□□□□ -0.77
SPG11-207ENST00000558138 TRIM29Q14134 588 aa10.27□□□□□ -0.77
SPG11-207ENST00000558138 RABEP1Q15276 862 aa10.27□□□□□ -0.77
SPG11-207ENST00000558138 TRIM60Q495X7 471 aa10.27□□□□□ -0.77
SPG11-207ENST00000558138 TMEM63BQ5T3F8 832 aa10.27□□□□□ -0.77
SPG11-207ENST00000558138 PRPF38BQ5VTL8 546 aaKnown RBP10.27□□□□□ -0.77
SPG11-207ENST00000558138 PCNX4Q63HM2 1172 aa10.27□□□□□ -0.77
SPG11-207ENST00000558138 TYW1BQ6NUM6 668 aa10.27□□□□□ -0.77
SPG11-207ENST00000558138 XRRA1Q6P2D8 792 aa10.27□□□□□ -0.77
SPG11-207ENST00000558138 CXCL17Q6UXB2 119 aa10.27□□□□□ -0.77
SPG11-207ENST00000558138 SLC39A5Q6ZMH5 540 aa10.27□□□□□ -0.77
SPG11-207ENST00000558138 VSIG10LQ86VR7 867 aa10.27□□□□□ -0.77
SPG11-207ENST00000558138 ANO3Q9BYT9 981 aa10.27□□□□□ -0.77
SPG11-207ENST00000558138 ALDH8A1Q9H2A2 487 aaPredicted RBP10.27□□□□□ -0.77
SPG11-207ENST00000558138 PKD2L1Q9P0L9 805 aa10.27□□□□□ -0.77
SPG11-207ENST00000558138 LIMCH1Q9UPQ0 1083 aa10.27□□□□□ -0.77
SPG11-207ENST00000558138 BRCA2P51587 3418 aa10.27□□□□□ -0.77
SPG11-207ENST00000558138 H0YGN5 161 aa10.26□□□□□ -0.77
SPG11-207ENST00000558138 TLR3O15455 904 aaKnown RBP10.26□□□□□ -0.77
SPG11-207ENST00000558138 FIBPO43427 364 aa10.26□□□□□ -0.77
SPG11-207ENST00000558138 CABYRO75952 493 aa10.26□□□□□ -0.77
SPG11-207ENST00000558138 GGPS1O95749 300 aa10.26□□□□□ -0.77
SPG11-207ENST00000558138 RBM25P49756 843 aaKnown RBP10.26□□□□□ -0.77
SPG11-207ENST00000558138 MTMR1Q13613 665 aa10.26□□□□□ -0.77
SPG11-207ENST00000558138 LAMC2Q13753 1193 aa10.26□□□□□ -0.77
SPG11-207ENST00000558138 NTRK3Q16288 839 aa10.26□□□□□ -0.77
SPG11-207ENST00000558138 PKN1Q16512 942 aa10.26□□□□□ -0.77
SPG11-207ENST00000558138 ME3Q16798 604 aa10.26□□□□□ -0.77
SPG11-207ENST00000558138 FAM47CQ5HY64 1035 aa10.26□□□□□ -0.77
SPG11-207ENST00000558138 MCTP2Q6DN12 878 aa10.26□□□□□ -0.77
SPG11-207ENST00000558138 CCDC83Q8IWF9 413 aa10.26□□□□□ -0.77
SPG11-207ENST00000558138 KLHDC9Q8NEP7 349 aa10.26□□□□□ -0.77
SPG11-207ENST00000558138 AFG1LQ8WV93 481 aa10.26□□□□□ -0.77
SPG11-207ENST00000558138 GTF3C6Q969F1 213 aa10.26□□□□□ -0.77
SPG11-207ENST00000558138 CDHR1Q96JP9 859 aa10.26□□□□□ -0.77
SPG11-207ENST00000558138 ZSCAN31Q96LW9 406 aaPredicted RBP10.26□□□□□ -0.77
SPG11-207ENST00000558138 SPATA33Q96N06 139 aa10.26□□□□□ -0.77
SPG11-207ENST00000558138 LBHD1Q9BQE6 289 aaPredicted RBP10.26□□□□□ -0.77
SPG11-207ENST00000558138 BRMS1Q9HCU9 246 aa10.26□□□□□ -0.77
SPG11-207ENST00000558138 ORC3Q9UBD5 711 aaPredicted RBP10.26□□□□□ -0.77
SPG11-207ENST00000558138 TCEAL9Q9UHQ7 104 aa10.26□□□□□ -0.77
SPG11-207ENST00000558138 MROH7Q68CQ1 1323 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms