RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 PLXNA1Q9UIW2 1896 aa14.06□□□□□ -0.16
TPM1-209ENST00000558072 FIBPO43427 364 aa14.06□□□□□ -0.16
TPM1-209ENST00000558072 MCM4P33991 863 aa14.06□□□□□ -0.16
TPM1-209ENST00000558072 MCM7P33993 719 aa14.06□□□□□ -0.16
TPM1-209ENST00000558072 ME1P48163 572 aa14.06□□□□□ -0.16
TPM1-209ENST00000558072 TOB1P50616 345 aaPredicted RBP14.06□□□□□ -0.16
TPM1-209ENST00000558072 UBXN2AP68543 259 aa14.06□□□□□ -0.16
TPM1-209ENST00000558072 ATP2C1P98194 919 aaPredicted RBP14.06□□□□□ -0.16
TPM1-209ENST00000558072 STXBP2Q15833 593 aa14.06□□□□□ -0.16
TPM1-209ENST00000558072 SKOR2Q2VWA4 1001 aaPredicted RBP14.06□□□□□ -0.16
TPM1-209ENST00000558072 FOXD4L6Q3SYB3 417 aaPredicted RBP14.06□□□□□ -0.16
TPM1-209ENST00000558072 CEP55Q53EZ4 464 aa14.06□□□□□ -0.16
TPM1-209ENST00000558072 KCNV1Q6PIU1 500 aa14.06□□□□□ -0.16
TPM1-209ENST00000558072 FOXD4L3Q6VB84 417 aaPredicted RBP14.06□□□□□ -0.16
TPM1-209ENST00000558072 GPR142Q7Z601 462 aa14.06□□□□□ -0.16
TPM1-209ENST00000558072 DPP9Q86TI2 863 aa14.06□□□□□ -0.16
TPM1-209ENST00000558072 FAM133AQ8N9E0 248 aa14.06□□□□□ -0.16
TPM1-209ENST00000558072 KRI1Q8N9T8 703 aaKnown RBP14.06□□□□□ -0.16
TPM1-209ENST00000558072 ZNF296Q8WUU4 475 aaPredicted RBP14.06□□□□□ -0.16
TPM1-209ENST00000558072 LEO1Q8WVC0 666 aaPredicted RBP14.06□□□□□ -0.16
TPM1-209ENST00000558072 CRYGNQ8WXF5 182 aa14.06□□□□□ -0.16
TPM1-209ENST00000558072 ZFP91Q96JP5 570 aaPredicted RBP14.06□□□□□ -0.16
TPM1-209ENST00000558072 TRIM47Q96LD4 638 aa14.06□□□□□ -0.16
TPM1-209ENST00000558072 PDCD2LQ9BRP1 358 aa14.06□□□□□ -0.16
TPM1-209ENST00000558072 PYM1Q9BRP8 204 aaKnown RBP14.06□□□□□ -0.16
TPM1-209ENST00000558072 TCEAL9Q9UHQ7 104 aa14.06□□□□□ -0.16
TPM1-209ENST00000558072 GABRQQ9UN88 632 aa14.06□□□□□ -0.16
TPM1-209ENST00000558072 ASTN1O14525 1302 aa14.06□□□□□ -0.16
TPM1-209ENST00000558072 DNAJC25-GNG10A0A024R161 153 aa14.05□□□□□ -0.16
TPM1-209ENST00000558072 CUTAO60888 179 aa14.05□□□□□ -0.16
TPM1-209ENST00000558072 EIF3JO75822 258 aaKnown RBP14.05□□□□□ -0.16
TPM1-209ENST00000558072 MBD3O95983 291 aa14.05□□□□□ -0.16
TPM1-209ENST00000558072 NR3C2P08235 984 aa14.05□□□□□ -0.16
TPM1-209ENST00000558072 OR52Z1P0C646 297 aa14.05□□□□□ -0.16
TPM1-209ENST00000558072 HSPA8P11142 646 aaKnown RBP14.05□□□□□ -0.16
TPM1-209ENST00000558072 UBE2HP62256 183 aa14.05□□□□□ -0.16
TPM1-209ENST00000558072 CNTN2Q02246 1040 aa14.05□□□□□ -0.16
TPM1-209ENST00000558072 PDE4DQ08499 809 aa14.05□□□□□ -0.16
TPM1-209ENST00000558072 PTGDRQ13258 359 aa14.05□□□□□ -0.16
TPM1-209ENST00000558072 IRF5Q13568 498 aa14.05□□□□□ -0.16
TPM1-209ENST00000558072 GRB14Q14449 540 aa14.05□□□□□ -0.16
TPM1-209ENST00000558072 PGM5Q15124 567 aa14.05□□□□□ -0.16
TPM1-209ENST00000558072 ZNF174Q15697 407 aa14.05□□□□□ -0.16
TPM1-209ENST00000558072 CALCRLQ16602 461 aa14.05□□□□□ -0.16
TPM1-209ENST00000558072 EARS2Q5JPH6 523 aaKnown RBP14.05□□□□□ -0.16
TPM1-209ENST00000558072 ADALQ6DHV7 355 aa14.05□□□□□ -0.16
TPM1-209ENST00000558072 FAM173BQ6P4H8 233 aa14.05□□□□□ -0.16
TPM1-209ENST00000558072 DTHD1Q6ZMT9 781 aa14.05□□□□□ -0.16
TPM1-209ENST00000558072 VSIG10LQ86VR7 867 aa14.05□□□□□ -0.16
TPM1-209ENST00000558072 TRMT44Q8IYL2 757 aaKnown RBP14.05□□□□□ -0.16
TPM1-209ENST00000558072 ZNF579Q8NAF0 562 aaKnown RBP14.05□□□□□ -0.16
TPM1-209ENST00000558072 CCDC34Q96HJ3 373 aa14.05□□□□□ -0.16
TPM1-209ENST00000558072 MBOAT7Q96N66 472 aa14.05□□□□□ -0.16
TPM1-209ENST00000558072 TAAR1Q96RJ0 339 aa14.05□□□□□ -0.16
TPM1-209ENST00000558072 NUDT12Q9BQG2 462 aa14.05□□□□□ -0.16
TPM1-209ENST00000558072 CNPY2Q9Y2B0 182 aa14.05□□□□□ -0.16
TPM1-209ENST00000558072 PCDHB6Q9Y5E3 794 aa14.05□□□□□ -0.16
TPM1-209ENST00000558072 CLIC4Q9Y696 253 aa14.05□□□□□ -0.16
TPM1-209ENST00000558072 ZNF236Q9UL36 1845 aa14.05□□□□□ -0.16
TPM1-209ENST00000558072 ZNFX1Q9P2E3 1918 aaKnown RBP14.05□□□□□ -0.16
TPM1-209ENST00000558072 DOCK3Q8IZD9 2030 aa14.05□□□□□ -0.16
TPM1-209ENST00000558072 CASP8AP2Q9UKL3 1982 aa14.04□□□□□ -0.16
TPM1-209ENST00000558072 TNPO2O14787 897 aaKnown RBP14.04□□□□□ -0.16
TPM1-209ENST00000558072 SLC26A4O43511 780 aa14.04□□□□□ -0.16
TPM1-209ENST00000558072 ADORA2AP29274 412 aa14.04□□□□□ -0.16
TPM1-209ENST00000558072 LONP1P36776 959 aaKnown RBP14.04□□□□□ -0.16
TPM1-209ENST00000558072 TXLNAP40222 546 aa14.04□□□□□ -0.16
TPM1-209ENST00000558072 RGS2P41220 211 aa14.04□□□□□ -0.16
TPM1-209ENST00000558072 PSMC4P43686 418 aa14.04□□□□□ -0.16
TPM1-209ENST00000558072 ALDH5A1P51649 535 aaPredicted RBP14.04□□□□□ -0.16
TPM1-209ENST00000558072 LACTBP83111 547 aaPredicted RBP14.04□□□□□ -0.16
TPM1-209ENST00000558072 SP3Q02447 781 aa14.04□□□□□ -0.16
TPM1-209ENST00000558072 CEBPZQ03701 1054 aaKnown RBP14.04□□□□□ -0.16
TPM1-209ENST00000558072 PTPAQ15257 358 aa14.04□□□□□ -0.16
TPM1-209ENST00000558072 GIMAP8Q8ND71 665 aaPredicted RBP14.04□□□□□ -0.16
TPM1-209ENST00000558072 GPRASP2Q96D09 838 aa14.04□□□□□ -0.16
TPM1-209ENST00000558072 FGD4Q96M96 766 aa14.04□□□□□ -0.16
TPM1-209ENST00000558072 AK8Q96MA6 479 aa14.04□□□□□ -0.16
TPM1-209ENST00000558072 MXRA8Q9BRK3 442 aa14.04□□□□□ -0.16
TPM1-209ENST00000558072 SRPRBQ9Y5M8 271 aaKnown RBP14.04□□□□□ -0.16
TPM1-209ENST00000558072 CEP350Q5VT06 3117 aa14.03□□□□□ -0.16
TPM1-209ENST00000558072 A0A1W2PQ27 194 aa14.03□□□□□ -0.16
TPM1-209ENST00000558072 A0A1W2PQ64 194 aa14.03□□□□□ -0.16
TPM1-209ENST00000558072 A0A1W2PQD8 194 aa14.03□□□□□ -0.16
TPM1-209ENST00000558072 MEIS1O00470 390 aa14.03□□□□□ -0.16
TPM1-209ENST00000558072 COBLO75128 1261 aa14.03□□□□□ -0.16
TPM1-209ENST00000558072 TGFB3P10600 412 aa14.03□□□□□ -0.16
TPM1-209ENST00000558072 EIF2AK2P19525 551 aaKnown RBP14.03□□□□□ -0.16
TPM1-209ENST00000558072 PRMT2P55345 433 aa14.03□□□□□ -0.16
TPM1-209ENST00000558072 MAP2K5Q13163 448 aa14.03□□□□□ -0.16
TPM1-209ENST00000558072 PDIA5Q14554 519 aa14.03□□□□□ -0.16
TPM1-209ENST00000558072 PLA2G4DQ86XP0 818 aa14.03□□□□□ -0.16
TPM1-209ENST00000558072 IL31RAQ8NI17 732 aa14.03□□□□□ -0.16
TPM1-209ENST00000558072 NPLOC4Q8TAT6 608 aa14.03□□□□□ -0.16
TPM1-209ENST00000558072 ERO1AQ96HE7 468 aa14.03□□□□□ -0.16
TPM1-209ENST00000558072 WDR11Q9BZH6 1224 aa14.03□□□□□ -0.16
TPM1-209ENST00000558072 JADE2Q9NQC1 790 aa14.03□□□□□ -0.16
TPM1-209ENST00000558072 TBC1D22BQ9NU19 505 aa14.03□□□□□ -0.16
TPM1-209ENST00000558072 FAM13BQ9NYF5 915 aa14.03□□□□□ -0.16
TPM1-209ENST00000558072 UBIAD1Q9Y5Z9 338 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms