RNA–Protein interactions for RNA: ENST00000558026.1

IGKV2D-28-202, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

BASIC

Gene IGKV2D-28, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-202ENST00000558026 CLCN5P51795 746 aa11.59□□□□□ -0.55
IGKV2D-28-202ENST00000558026 ATXN1P54253 815 aaKnown RBP11.59□□□□□ -0.55
IGKV2D-28-202ENST00000558026 KLRC3Q07444 240 aa11.59□□□□□ -0.55
IGKV2D-28-202ENST00000558026 TRIM71Q2Q1W2 868 aaKnown RBP11.59□□□□□ -0.55
IGKV2D-28-202ENST00000558026 CWF19L1Q69YN2 538 aaKnown RBP11.59□□□□□ -0.55
IGKV2D-28-202ENST00000558026 FIBCD1Q8N539 461 aa11.59□□□□□ -0.55
IGKV2D-28-202ENST00000558026 FLCNQ8NFG4 579 aa11.59□□□□□ -0.55
IGKV2D-28-202ENST00000558026 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.59□□□□□ -0.55
IGKV2D-28-202ENST00000558026 IFIH1Q9BYX4 1025 aaKnown RBP11.59□□□□□ -0.55
IGKV2D-28-202ENST00000558026 OSBPL7Q9BZF2 842 aa11.59□□□□□ -0.55
IGKV2D-28-202ENST00000558026 CRNKL1Q9BZJ0 848 aaKnown RBP11.59□□□□□ -0.55
IGKV2D-28-202ENST00000558026 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.58□□□□□ -0.56
IGKV2D-28-202ENST00000558026 DCDC2BA2VCK2 349 aa11.58□□□□□ -0.56
IGKV2D-28-202ENST00000558026 KPNA6O60684 536 aa11.58□□□□□ -0.56
IGKV2D-28-202ENST00000558026 RB1P06400 928 aa11.58□□□□□ -0.56
IGKV2D-28-202ENST00000558026 ATF7P17544 494 aaPredicted RBP11.58□□□□□ -0.56
IGKV2D-28-202ENST00000558026 ZNF200P98182 395 aaPredicted RBP11.58□□□□□ -0.56
IGKV2D-28-202ENST00000558026 MTMR3Q13615 1198 aa11.58□□□□□ -0.56
IGKV2D-28-202ENST00000558026 COL9A3Q14050 684 aaPredicted RBP11.58□□□□□ -0.56
IGKV2D-28-202ENST00000558026 CCDC184Q52MB2 194 aa11.58□□□□□ -0.56
IGKV2D-28-202ENST00000558026 BRDTQ58F21 947 aaPredicted RBP11.58□□□□□ -0.56
IGKV2D-28-202ENST00000558026 MUM1L1Q5H9M0 696 aa11.58□□□□□ -0.56
IGKV2D-28-202ENST00000558026 KIAA0319Q5VV43 1072 aa11.58□□□□□ -0.56
IGKV2D-28-202ENST00000558026 CCDC105Q8IYK2 499 aa11.58□□□□□ -0.56
IGKV2D-28-202ENST00000558026 MORC4Q8TE76 937 aa11.58□□□□□ -0.56
IGKV2D-28-202ENST00000558026 SSH1Q8WYL5 1049 aa11.58□□□□□ -0.56
IGKV2D-28-202ENST00000558026 HAUS7Q99871 368 aa11.58□□□□□ -0.56
IGKV2D-28-202ENST00000558026 PRKRIP1Q9H875 184 aaPredicted RBP11.58□□□□□ -0.56
IGKV2D-28-202ENST00000558026 CYP39A1Q9NYL5 469 aa11.58□□□□□ -0.56
IGKV2D-28-202ENST00000558026 SORCS3Q9UPU3 1222 aa11.58□□□□□ -0.56
IGKV2D-28-202ENST00000558026 GREB1LQ9C091 1923 aaPredicted RBP11.57□□□□□ -0.56
IGKV2D-28-202ENST00000558026 MYH4Q9Y623 1939 aa11.57□□□□□ -0.56
IGKV2D-28-202ENST00000558026 RBM47A0AV96 593 aaKnown RBP11.57□□□□□ -0.56
IGKV2D-28-202ENST00000558026 ADRB1P08588 477 aa11.57□□□□□ -0.56
IGKV2D-28-202ENST00000558026 ALAS1P13196 640 aa11.57□□□□□ -0.56
IGKV2D-28-202ENST00000558026 OAZ1P54368 228 aa11.57□□□□□ -0.56
IGKV2D-28-202ENST00000558026 PLEKHG4Q58EX7 1191 aa11.57□□□□□ -0.56
IGKV2D-28-202ENST00000558026 TNNI3KQ59H18 835 aa11.57□□□□□ -0.56
IGKV2D-28-202ENST00000558026 SESTD1Q86VW0 696 aa11.57□□□□□ -0.56
IGKV2D-28-202ENST00000558026 UBALD2Q8IYN6 164 aa11.57□□□□□ -0.56
IGKV2D-28-202ENST00000558026 CRIPAKQ8N1N5 446 aa11.57□□□□□ -0.56
IGKV2D-28-202ENST00000558026 LCORLQ8N3X6 602 aa11.57□□□□□ -0.56
IGKV2D-28-202ENST00000558026 VN1R2Q8NFZ6 395 aa11.57□□□□□ -0.56
IGKV2D-28-202ENST00000558026 RUBCNQ92622 972 aa11.57□□□□□ -0.56
IGKV2D-28-202ENST00000558026 KAT2BQ92831 832 aa11.57□□□□□ -0.56
IGKV2D-28-202ENST00000558026 IL17RAQ96F46 866 aa11.57□□□□□ -0.56
IGKV2D-28-202ENST00000558026 TRERF1Q96PN7 1200 aa11.57□□□□□ -0.56
IGKV2D-28-202ENST00000558026 APOL5Q9BWW9 433 aa11.57□□□□□ -0.56
IGKV2D-28-202ENST00000558026 SEMA4AQ9H3S1 761 aa11.57□□□□□ -0.56
IGKV2D-28-202ENST00000558026 TSHZ2Q9NRE2 1034 aa11.57□□□□□ -0.56
IGKV2D-28-202ENST00000558026 HDAC6Q9UBN7 1215 aa11.57□□□□□ -0.56
IGKV2D-28-202ENST00000558026 CDH22Q9UJ99 828 aa11.57□□□□□ -0.56
IGKV2D-28-202ENST00000558026 PLAGL2Q9UPG8 496 aa11.57□□□□□ -0.56
IGKV2D-28-202ENST00000558026 FPGT-TNNI3KV9GXZ4 949 aa11.57□□□□□ -0.56
IGKV2D-28-202ENST00000558026 RAD50Q92878 1312 aa11.57□□□□□ -0.56
IGKV2D-28-202ENST00000558026 PRKAB2O43741 272 aa11.56□□□□□ -0.56
IGKV2D-28-202ENST00000558026 IGSF3O75054 1194 aa11.56□□□□□ -0.56
IGKV2D-28-202ENST00000558026 ASGR2P07307 311 aa11.56□□□□□ -0.56
IGKV2D-28-202ENST00000558026 SNAP25P60880 206 aa11.56□□□□□ -0.56
IGKV2D-28-202ENST00000558026 G3BP1Q13283 466 aaKnown RBP eCLIP11.56□□□□□ -0.56
IGKV2D-28-202ENST00000558026 PPP2R5BQ15173 497 aa11.56□□□□□ -0.56
IGKV2D-28-202ENST00000558026 NSMFQ6X4W1 530 aa11.56□□□□□ -0.56
IGKV2D-28-202ENST00000558026 DTWD2Q8NBA8 298 aa11.56□□□□□ -0.56
IGKV2D-28-202ENST00000558026 ZNF512BQ96KM6 892 aaPredicted RBP11.56□□□□□ -0.56
IGKV2D-28-202ENST00000558026 TLR7Q9NYK1 1049 aaKnown RBP11.56□□□□□ -0.56
IGKV2D-28-202ENST00000558026 GTF2IRD1Q9UHL9 959 aa11.56□□□□□ -0.56
IGKV2D-28-202ENST00000558026 KIAA1671Q9BY89 1806 aa11.56□□□□□ -0.56
IGKV2D-28-202ENST00000558026 PER2O15055 1255 aa11.55□□□□□ -0.56
IGKV2D-28-202ENST00000558026 PTK7Q13308 1070 aa11.55□□□□□ -0.56
IGKV2D-28-202ENST00000558026 HIC1Q14526 733 aa11.55□□□□□ -0.56
IGKV2D-28-202ENST00000558026 C16orf86Q6ZW13 317 aa11.55□□□□□ -0.56
IGKV2D-28-202ENST00000558026 LRRC47Q8N1G4 583 aaKnown RBP11.55□□□□□ -0.56
IGKV2D-28-202ENST00000558026 AFG1LQ8WV93 481 aa11.55□□□□□ -0.56
IGKV2D-28-202ENST00000558026 RIN2Q8WYP3 895 aaPredicted RBP11.55□□□□□ -0.56
IGKV2D-28-202ENST00000558026 PPP2R3CQ969Q6 453 aa11.55□□□□□ -0.56
IGKV2D-28-202ENST00000558026 CHMP4CQ96CF2 233 aa11.55□□□□□ -0.56
IGKV2D-28-202ENST00000558026 FEM1BQ9UK73 627 aa11.55□□□□□ -0.56
IGKV2D-28-202ENST00000558026 FANCMQ8IYD8 2048 aa11.55□□□□□ -0.56
IGKV2D-28-202ENST00000558026 ARIH2O95376 493 aa11.54□□□□□ -0.56
IGKV2D-28-202ENST00000558026 ITGB1P05556 798 aa11.54□□□□□ -0.56
IGKV2D-28-202ENST00000558026 NPR3P17342 541 aa11.54□□□□□ -0.56
IGKV2D-28-202ENST00000558026 AOC1P19801 751 aa11.54□□□□□ -0.56
IGKV2D-28-202ENST00000558026 ALDH5A1P51649 535 aaPredicted RBP11.54□□□□□ -0.56
IGKV2D-28-202ENST00000558026 PDE4BQ07343 736 aa11.54□□□□□ -0.56
IGKV2D-28-202ENST00000558026 MTX1Q13505 466 aa11.54□□□□□ -0.56
IGKV2D-28-202ENST00000558026 C12orf60Q5U649 245 aa11.54□□□□□ -0.56
IGKV2D-28-202ENST00000558026 CLP1Q92989 425 aaKnown RBP11.54□□□□□ -0.56
IGKV2D-28-202ENST00000558026 ALG1Q9BT22 464 aa11.54□□□□□ -0.56
IGKV2D-28-202ENST00000558026 DBNLQ9UJU6 430 aaKnown RBP11.54□□□□□ -0.56
IGKV2D-28-202ENST00000558026 EMSYQ7Z589 1322 aa11.54□□□□□ -0.56
IGKV2D-28-202ENST00000558026 ADGRA3Q8IWK6 1321 aa11.54□□□□□ -0.56
IGKV2D-28-202ENST00000558026 PLXNA4Q9HCM2 1894 aa11.53□□□□□ -0.56
IGKV2D-28-202ENST00000558026 PNMA6EA0A0J9YXQ4 647 aa11.53□□□□□ -0.56
IGKV2D-28-202ENST00000558026 RSPH10B2B2RC85 870 aa11.53□□□□□ -0.56
IGKV2D-28-202ENST00000558026 C2CD4DB7Z1M9 353 aa11.53□□□□□ -0.56
IGKV2D-28-202ENST00000558026 RSPH10BP0C881 870 aa11.53□□□□□ -0.56
IGKV2D-28-202ENST00000558026 TXNP10599 105 aaKnown RBP11.53□□□□□ -0.56
IGKV2D-28-202ENST00000558026 THPOP40225 353 aa11.53□□□□□ -0.56
IGKV2D-28-202ENST00000558026 BAATQ14032 418 aaPredicted RBP11.53□□□□□ -0.56
IGKV2D-28-202ENST00000558026 C7orf31Q8N865 590 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms