RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 FOXP1Q9H334 677 aaPredicted RBP24.26■■□□□ 1.47
CASC4-204ENST00000557945 RTEL1Q9NZ71 1219 aa24.26■■□□□ 1.47
CASC4-204ENST00000557945 MCM3APO60318 1980 aa24.25■■□□□ 1.47
CASC4-204ENST00000557945 MYCP01106 439 aaPredicted RBP24.25■■□□□ 1.47
CASC4-204ENST00000557945 EARS2Q5JPH6 523 aaKnown RBP24.25■■□□□ 1.47
CASC4-204ENST00000557945 TNFRSF25Q93038 417 aa24.25■■□□□ 1.47
CASC4-204ENST00000557945 VTA1Q9NP79 307 aa24.25■■□□□ 1.47
CASC4-204ENST00000557945 CNGA1P29973 690 aa24.24■■□□□ 1.47
CASC4-204ENST00000557945 ZNF76P36508 570 aa24.24■■□□□ 1.47
CASC4-204ENST00000557945 MRPS9P82933 396 aaKnown RBP24.24■■□□□ 1.47
CASC4-204ENST00000557945 INF2Q27J81 1249 aa24.24■■□□□ 1.47
CASC4-204ENST00000557945 NRBP1Q9UHY1 535 aa24.24■■□□□ 1.47
CASC4-204ENST00000557945 FAM205CA6NFA0 338 aa24.23■■□□□ 1.47
CASC4-204ENST00000557945 KIF28PB7ZC32 967 aa24.23■■□□□ 1.47
CASC4-204ENST00000557945 STX6O43752 255 aa24.23■■□□□ 1.47
CASC4-204ENST00000557945 MAP3K21Q5TCX8 1036 aa24.23■■□□□ 1.47
CASC4-204ENST00000557945 SEPT14Q6ZU15 432 aa24.23■■□□□ 1.47
CASC4-204ENST00000557945 TRPV1Q8NER1 839 aa24.23■■□□□ 1.47
CASC4-204ENST00000557945 KATNBL1Q9H079 304 aa24.23■■□□□ 1.47
CASC4-204ENST00000557945 STAM2O75886 525 aa24.22■■□□□ 1.47
CASC4-204ENST00000557945 ZNF865P0CJ78 1059 aaPredicted RBP24.22■■□□□ 1.47
CASC4-204ENST00000557945 CYBAP13498 195 aa24.22■■□□□ 1.47
CASC4-204ENST00000557945 CCND3P30281 292 aaPredicted RBP24.22■■□□□ 1.47
CASC4-204ENST00000557945 COL13A1Q5TAT6 717 aaPredicted RBP24.22■■□□□ 1.47
CASC4-204ENST00000557945 NOSTRINQ8IVI9 506 aa24.22■■□□□ 1.47
CASC4-204ENST00000557945 PDGFCQ9NRA1 345 aa24.22■■□□□ 1.47
CASC4-204ENST00000557945 CYP3A4P08684 503 aa24.21■■□□□ 1.47
CASC4-204ENST00000557945 U2AF2P26368 475 aaKnown RBP eCLIP24.21■■□□□ 1.474e-6■■■■□ 26.4
CASC4-204ENST00000557945 CRYGNQ8WXF5 182 aa24.21■■□□□ 1.47
CASC4-204ENST00000557945 HMX1Q9NP08 348 aaPredicted RBP24.21■■□□□ 1.47
CASC4-204ENST00000557945 MTMR6Q9Y217 621 aa24.21■■□□□ 1.47
CASC4-204ENST00000557945 USP11P51784 963 aa24.2■■□□□ 1.46
CASC4-204ENST00000557945 LETM2Q2VYF4 491 aa24.2■■□□□ 1.46
CASC4-204ENST00000557945 CCDC144BQ3MJ40 725 aa24.2■■□□□ 1.46
CASC4-204ENST00000557945 GNPTABQ3T906 1256 aa24.2■■□□□ 1.46
CASC4-204ENST00000557945 TAPT1Q6NXT6 567 aa24.2■■□□□ 1.46
CASC4-204ENST00000557945 NEK8Q86SG6 692 aa24.2■■□□□ 1.46
CASC4-204ENST00000557945 NLRX1Q86UT6 975 aa24.2■■□□□ 1.46
CASC4-204ENST00000557945 FERMT3Q86UX7 667 aa24.2■■□□□ 1.46
CASC4-204ENST00000557945 ARMC5Q96C12 935 aa24.2■■□□□ 1.46
CASC4-204ENST00000557945 FAM184BQ9ULE4 1060 aa24.2■■□□□ 1.46
CASC4-204ENST00000557945 UBIAD1Q9Y5Z9 338 aa24.2■■□□□ 1.46
CASC4-204ENST00000557945 RGS20O76081 388 aa24.19■■□□□ 1.46
CASC4-204ENST00000557945 ITGB5P18084 799 aa24.19■■□□□ 1.46
CASC4-204ENST00000557945 ATP2B1P20020 1258 aa24.19■■□□□ 1.46
CASC4-204ENST00000557945 ADCYAP1R1P41586 468 aa24.19■■□□□ 1.46
CASC4-204ENST00000557945 MTFR1Q15390 333 aa24.19■■□□□ 1.46
CASC4-204ENST00000557945 CEP55Q53EZ4 464 aa24.19■■□□□ 1.46
CASC4-204ENST00000557945 SCFD2Q8WU76 684 aa24.19■■□□□ 1.46
CASC4-204ENST00000557945 ZNF333Q96JL9 665 aa24.19■■□□□ 1.46
CASC4-204ENST00000557945 INPP4AQ96PE3 977 aaPredicted RBP24.19■■□□□ 1.46
CASC4-204ENST00000557945 MXRA8Q9BRK3 442 aa24.19■■□□□ 1.46
CASC4-204ENST00000557945 WDR11Q9BZH6 1224 aa24.19■■□□□ 1.46
CASC4-204ENST00000557945 UNC93B1Q9H1C4 597 aa24.19■■□□□ 1.46
CASC4-204ENST00000557945 MRVI1Q9Y6F6 885 aa24.19■■□□□ 1.46
CASC4-204ENST00000557945 LRRC37A2A6NM11 1700 aa24.19■■□□□ 1.46
CASC4-204ENST00000557945 CCL5P13501 91 aa24.18■■□□□ 1.46
CASC4-204ENST00000557945 PDIA4P13667 645 aaKnown RBP24.18■■□□□ 1.46
CASC4-204ENST00000557945 AKR1A1P14550 325 aa24.18■■□□□ 1.46
CASC4-204ENST00000557945 CYP2W1Q8TAV3 490 aa24.18■■□□□ 1.46
CASC4-204ENST00000557945 JADE2Q9NQC1 790 aa24.18■■□□□ 1.46
CASC4-204ENST00000557945 MYH7BA7E2Y1 1941 aa24.18■■□□□ 1.46
CASC4-204ENST00000557945 FAM86B1E9PN63 330 aa24.17■■□□□ 1.46
CASC4-204ENST00000557945 SEPT4O43236 478 aa24.17■■□□□ 1.46
CASC4-204ENST00000557945 EDIL3O43854 480 aa24.17■■□□□ 1.46
CASC4-204ENST00000557945 TDP2O95551 362 aa24.17■■□□□ 1.46
CASC4-204ENST00000557945 FAM86B2P0C5J1 330 aa24.17■■□□□ 1.46
CASC4-204ENST00000557945 CIITAP33076 1130 aa24.17■■□□□ 1.46
CASC4-204ENST00000557945 MTMR1Q13613 665 aa24.17■■□□□ 1.46
CASC4-204ENST00000557945 TTLL4Q14679 1199 aa24.17■■□□□ 1.46
CASC4-204ENST00000557945 PRR16Q569H4 304 aa24.17■■□□□ 1.46
CASC4-204ENST00000557945 FOXD4L5Q5VV16 416 aaPredicted RBP24.17■■□□□ 1.46
CASC4-204ENST00000557945 IQSEC1Q6DN90 963 aa24.17■■□□□ 1.46
CASC4-204ENST00000557945 FOXD4L4Q8WXT5 416 aaPredicted RBP24.17■■□□□ 1.46
CASC4-204ENST00000557945 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.17■■□□□ 1.46
CASC4-204ENST00000557945 RNF208Q9H0X6 261 aa24.17■■□□□ 1.46
CASC4-204ENST00000557945 NOL7Q9UMY1 257 aaKnown RBP24.17■■□□□ 1.46
CASC4-204ENST00000557945 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.16■■□□□ 1.46
CASC4-204ENST00000557945 RBM47A0AV96 593 aaKnown RBP24.16■■□□□ 1.46
CASC4-204ENST00000557945 FIBPO43427 364 aa24.16■■□□□ 1.46
CASC4-204ENST00000557945 CCNT1O60563 726 aaKnown RBP24.16■■□□□ 1.46
CASC4-204ENST00000557945 TXNP10599 105 aaKnown RBP24.16■■□□□ 1.46
CASC4-204ENST00000557945 TNFAIP2Q03169 654 aa24.16■■□□□ 1.46
CASC4-204ENST00000557945 ANO1Q5XXA6 986 aa24.16■■□□□ 1.46
CASC4-204ENST00000557945 PLA2G4DQ86XP0 818 aa24.16■■□□□ 1.46
CASC4-204ENST00000557945 GPRASP2Q96D09 838 aa24.16■■□□□ 1.46
CASC4-204ENST00000557945 CDHR1Q96JP9 859 aa24.16■■□□□ 1.46
CASC4-204ENST00000557945 NAP1L4Q99733 375 aaKnown RBP24.16■■□□□ 1.46
CASC4-204ENST00000557945 HTTP42858 3142 aa24.16■■□□□ 1.46
CASC4-204ENST00000557945 MEIS1O00470 390 aa24.16■■□□□ 1.46
CASC4-204ENST00000557945 KCNV1Q6PIU1 500 aa24.16■■□□□ 1.46
CASC4-204ENST00000557945 BRAPQ7Z569 592 aa24.16■■□□□ 1.46
CASC4-204ENST00000557945 SPATA31C2B4DYI2 1134 aa24.15■■□□□ 1.46
CASC4-204ENST00000557945 ARIH2O95376 493 aa24.15■■□□□ 1.46
CASC4-204ENST00000557945 ARP10275 920 aa24.15■■□□□ 1.46
CASC4-204ENST00000557945 GCFC2P16383 781 aaKnown RBP24.15■■□□□ 1.46
CASC4-204ENST00000557945 SMPD1P17405 629 aa24.15■■□□□ 1.46
CASC4-204ENST00000557945 ICAM3P32942 547 aa24.15■■□□□ 1.46
CASC4-204ENST00000557945 RESTQ13127 1097 aa24.15■■□□□ 1.46
CASC4-204ENST00000557945 SEMA3FQ13275 785 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms