RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 ACLYP53396 1101 aa13.26□□□□□ -0.29
LINC00648-204ENST00000557749 SNAP25P60880 206 aa13.26□□□□□ -0.29
LINC00648-204ENST00000557749 PTH1RQ03431 593 aa13.26□□□□□ -0.29
LINC00648-204ENST00000557749 BAATQ14032 418 aaPredicted RBP13.26□□□□□ -0.29
LINC00648-204ENST00000557749 SEC23AQ15436 765 aa13.26□□□□□ -0.29
LINC00648-204ENST00000557749 TMEM67Q5HYA8 995 aa13.26□□□□□ -0.29
LINC00648-204ENST00000557749 RASGRP2Q7LDG7 609 aa13.26□□□□□ -0.29
LINC00648-204ENST00000557749 ADGRF4Q8IZF3 695 aa13.26□□□□□ -0.29
LINC00648-204ENST00000557749 KLHDC9Q8NEP7 349 aa13.26□□□□□ -0.29
LINC00648-204ENST00000557749 TMEM87BQ96K49 555 aa13.26□□□□□ -0.29
LINC00648-204ENST00000557749 FGD4Q96M96 766 aa13.26□□□□□ -0.29
LINC00648-204ENST00000557749 TOX2Q96NM4 488 aa13.26□□□□□ -0.29
LINC00648-204ENST00000557749 LZTS2Q9BRK4 669 aa13.26□□□□□ -0.29
LINC00648-204ENST00000557749 IL25Q9H293 177 aa13.26□□□□□ -0.29
LINC00648-204ENST00000557749 KDM4CQ9H3R0 1056 aa13.26□□□□□ -0.29
LINC00648-204ENST00000557749 ANO2Q9NQ90 1003 aa13.26□□□□□ -0.29
LINC00648-204ENST00000557749 ATP11BQ9Y2G3 1177 aa13.26□□□□□ -0.29
LINC00648-204ENST00000557749 SMCHD1A6NHR9 2005 aa13.25□□□□□ -0.29
LINC00648-204ENST00000557749 DCDC2CA8MYV0 355 aa13.25□□□□□ -0.29
LINC00648-204ENST00000557749 KLRF2D3W0D1 207 aa13.25□□□□□ -0.29
LINC00648-204ENST00000557749 NFIBO00712 420 aa13.25□□□□□ -0.29
LINC00648-204ENST00000557749 ZBTB5O15062 677 aa13.25□□□□□ -0.29
LINC00648-204ENST00000557749 CDC45O75419 566 aa13.25□□□□□ -0.29
LINC00648-204ENST00000557749 CALML3P27482 149 aa13.25□□□□□ -0.29
LINC00648-204ENST00000557749 GNAQP50148 359 aa13.25□□□□□ -0.29
LINC00648-204ENST00000557749 RPS6P62753 249 aaKnown RBP13.25□□□□□ -0.29
LINC00648-204ENST00000557749 KRT32Q14532 448 aa13.25□□□□□ -0.29
LINC00648-204ENST00000557749 USH1GQ495M9 461 aa13.25□□□□□ -0.29
LINC00648-204ENST00000557749 GNASQ5JWF2 1037 aa13.25□□□□□ -0.29
LINC00648-204ENST00000557749 TLK2Q86UE8 772 aa13.25□□□□□ -0.29
LINC00648-204ENST00000557749 RDH13Q8NBN7 331 aa13.25□□□□□ -0.29
LINC00648-204ENST00000557749 CTCFLQ8NI51 663 aaPredicted RBP13.25□□□□□ -0.29
LINC00648-204ENST00000557749 NSUN6Q8TEA1 469 aaKnown RBP13.25□□□□□ -0.29
LINC00648-204ENST00000557749 CLEC4DQ8WXI8 215 aa13.25□□□□□ -0.29
LINC00648-204ENST00000557749 IWS1Q96ST2 819 aa13.25□□□□□ -0.29
LINC00648-204ENST00000557749 UBE2OQ9C0C9 1292 aaKnown RBP13.25□□□□□ -0.29
LINC00648-204ENST00000557749 UBA5Q9GZZ9 404 aa13.25□□□□□ -0.29
LINC00648-204ENST00000557749 KATNBL1Q9H079 304 aa13.25□□□□□ -0.29
LINC00648-204ENST00000557749 TRIOBPQ9H2D6 2365 aa13.25□□□□□ -0.29
LINC00648-204ENST00000557749 A0A0U1RQG5 324 aaPredicted RBP13.24□□□□□ -0.29
LINC00648-204ENST00000557749 PALM3A6NDB9 673 aaPredicted RBP13.24□□□□□ -0.29
LINC00648-204ENST00000557749 TLR3O15455 904 aaKnown RBP13.24□□□□□ -0.29
LINC00648-204ENST00000557749 CLTBP09497 229 aa13.24□□□□□ -0.29
LINC00648-204ENST00000557749 SMARCA1P28370 1054 aa13.24□□□□□ -0.29
LINC00648-204ENST00000557749 MAGEA10P43363 369 aaPredicted RBP13.24□□□□□ -0.29
LINC00648-204ENST00000557749 CPT1AP50416 773 aa13.24□□□□□ -0.29
LINC00648-204ENST00000557749 FXR1P51114 621 aaKnown RBP eCLIP13.24□□□□□ -0.29
LINC00648-204ENST00000557749 GRM4Q14833 912 aa13.24□□□□□ -0.29
LINC00648-204ENST00000557749 KCNA10Q16322 511 aa13.24□□□□□ -0.29
LINC00648-204ENST00000557749 QRICH1Q2TAL8 776 aa13.24□□□□□ -0.29
LINC00648-204ENST00000557749 CYB5R4Q7L1T6 521 aa13.24□□□□□ -0.29
LINC00648-204ENST00000557749 ANKRD33Q7Z3H0 272 aa13.24□□□□□ -0.29
LINC00648-204ENST00000557749 TDHQ8IZJ6 230 aa13.24□□□□□ -0.29
LINC00648-204ENST00000557749 SCFD2Q8WU76 684 aa13.24□□□□□ -0.29
LINC00648-204ENST00000557749 FERMT2Q96AC1 680 aa13.24□□□□□ -0.29
LINC00648-204ENST00000557749 MCM3APO60318 1980 aa13.23□□□□□ -0.29
LINC00648-204ENST00000557749 CCDC69A6NI79 296 aa13.23□□□□□ -0.29
LINC00648-204ENST00000557749 KPNA6O60684 536 aa13.23□□□□□ -0.29
LINC00648-204ENST00000557749 HMGB1P09429 215 aaKnown RBP13.23□□□□□ -0.29
LINC00648-204ENST00000557749 SYN1P17600 705 aa13.23□□□□□ -0.29
LINC00648-204ENST00000557749 TTLL4Q14679 1199 aa13.23□□□□□ -0.29
LINC00648-204ENST00000557749 PPP2R5BQ15173 497 aa13.23□□□□□ -0.29
LINC00648-204ENST00000557749 FSCN1Q16658 493 aaKnown RBP13.23□□□□□ -0.29
LINC00648-204ENST00000557749 TRIM60Q495X7 471 aa13.23□□□□□ -0.29
LINC00648-204ENST00000557749 DUSP28Q4G0W2 176 aa13.23□□□□□ -0.29
LINC00648-204ENST00000557749 ERICH6BQ5W0A0 696 aa13.23□□□□□ -0.29
LINC00648-204ENST00000557749 SLC30A10Q6XR72 485 aa13.23□□□□□ -0.29
LINC00648-204ENST00000557749 SYNE3Q6ZMZ3 975 aa13.23□□□□□ -0.29
LINC00648-204ENST00000557749 MB21D2Q8IYB1 491 aaPredicted RBP13.23□□□□□ -0.29
LINC00648-204ENST00000557749 VTI1AQ96AJ9 217 aa13.23□□□□□ -0.29
LINC00648-204ENST00000557749 LSG1Q9H089 658 aaKnown RBP13.23□□□□□ -0.29
LINC00648-204ENST00000557749 JMJD4Q9H9V9 463 aa13.23□□□□□ -0.29
LINC00648-204ENST00000557749 PRDM5Q9NQX1 630 aaPredicted RBP13.23□□□□□ -0.29
LINC00648-204ENST00000557749 POLR3EQ9NVU0 708 aa13.23□□□□□ -0.29
LINC00648-204ENST00000557749 MAD2L2Q9UI95 211 aa13.23□□□□□ -0.29
LINC00648-204ENST00000557749 GNEQ9Y223 722 aaKnown RBP13.23□□□□□ -0.29
LINC00648-204ENST00000557749 MYH6P13533 1939 aa13.22□□□□□ -0.29
LINC00648-204ENST00000557749 RBM47A0AV96 593 aaKnown RBP13.22□□□□□ -0.29
LINC00648-204ENST00000557749 ASGR1P07306 291 aa13.22□□□□□ -0.29
LINC00648-204ENST00000557749 EDNRBP24530 442 aa13.22□□□□□ -0.29
LINC00648-204ENST00000557749 LIFRP42702 1097 aa13.22□□□□□ -0.29
LINC00648-204ENST00000557749 GHRHRQ02643 423 aa13.22□□□□□ -0.29
LINC00648-204ENST00000557749 TROAPQ12815 778 aa13.22□□□□□ -0.29
LINC00648-204ENST00000557749 LRIT3Q3SXY7 679 aa13.22□□□□□ -0.29
LINC00648-204ENST00000557749 CREB3L3Q68CJ9 461 aa13.22□□□□□ -0.29
LINC00648-204ENST00000557749 CCSAPQ6IQ19 270 aaPredicted RBP13.22□□□□□ -0.29
LINC00648-204ENST00000557749 NFXL1Q6ZNB6 911 aa13.22□□□□□ -0.29
LINC00648-204ENST00000557749 TEX2Q8IWB9 1127 aa13.22□□□□□ -0.29
LINC00648-204ENST00000557749 FBXO16Q8IX29 292 aaPredicted RBP13.22□□□□□ -0.29
LINC00648-204ENST00000557749 MTMR8Q96EF0 704 aa13.22□□□□□ -0.29
LINC00648-204ENST00000557749 WDR11Q9BZH6 1224 aa13.22□□□□□ -0.29
LINC00648-204ENST00000557749 VAT1LQ9HCJ6 419 aa13.22□□□□□ -0.29
LINC00648-204ENST00000557749 SEC63Q9UGP8 760 aaKnown RBP13.22□□□□□ -0.29
LINC00648-204ENST00000557749 PCDHA1Q9Y5I3 950 aa13.22□□□□□ -0.29
LINC00648-204ENST00000557749 PNMA6FA0A0J9YX94 578 aa13.21□□□□□ -0.29
LINC00648-204ENST00000557749 SLC27A2O14975 620 aa13.21□□□□□ -0.29
LINC00648-204ENST00000557749 KIAA0355O15063 1070 aa13.21□□□□□ -0.29
LINC00648-204ENST00000557749 PRC1O43663 620 aa13.21□□□□□ -0.29
LINC00648-204ENST00000557749 ACTN4O43707 911 aaKnown RBP13.21□□□□□ -0.29
LINC00648-204ENST00000557749 PQBP1O60828 265 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms