RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 CYP2C18P33260 490 aa26.22■■□□□ 1.79
TMEM260-214ENST00000556975 PGM5Q15124 567 aa26.22■■□□□ 1.79
TMEM260-214ENST00000556975 NFRKBQ6P4R8 1299 aa26.22■■□□□ 1.79
TMEM260-214ENST00000556975 EMID1Q96A84 441 aaPredicted RBP26.22■■□□□ 1.79
TMEM260-214ENST00000556975 RRP36Q96EU6 259 aaKnown RBP26.22■■□□□ 1.79
TMEM260-214ENST00000556975 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.22■■□□□ 1.79
TMEM260-214ENST00000556975 NOC4LQ9BVI4 516 aaKnown RBP26.22■■□□□ 1.79
TMEM260-214ENST00000556975 RGS20O76081 388 aa26.21■■□□□ 1.79
TMEM260-214ENST00000556975 PTPN11Q06124 597 aaPredicted RBP26.21■■□□□ 1.79
TMEM260-214ENST00000556975 NBPF20Q3BBV1 942 aa26.21■■□□□ 1.79
TMEM260-214ENST00000556975 TMEM240Q5SV17 173 aa26.21■■□□□ 1.79
TMEM260-214ENST00000556975 KCNV1Q6PIU1 500 aa26.21■■□□□ 1.79
TMEM260-214ENST00000556975 SRBD1Q8N5C6 995 aaKnown RBP26.21■■□□□ 1.79
TMEM260-214ENST00000556975 AFG1LQ8WV93 481 aa26.21■■□□□ 1.79
TMEM260-214ENST00000556975 NEK1Q96PY6 1258 aa26.21■■□□□ 1.79
TMEM260-214ENST00000556975 SLC12A7Q9Y666 1083 aa26.21■■□□□ 1.79
TMEM260-214ENST00000556975 MMP3P08254 477 aa26.2■■□□□ 1.78
TMEM260-214ENST00000556975 MYCLP12524 364 aaPredicted RBP26.2■■□□□ 1.78
TMEM260-214ENST00000556975 STXBP5LQ9Y2K9 1186 aa26.2■■□□□ 1.78
TMEM260-214ENST00000556975 MRVI1Q9Y6F6 885 aa26.2■■□□□ 1.78
TMEM260-214ENST00000556975 PLEKHA8P1O95397 391 aa26.19■■□□□ 1.78
TMEM260-214ENST00000556975 TGFB3P10600 412 aa26.19■■□□□ 1.78
TMEM260-214ENST00000556975 EXOSC10Q01780 885 aaKnown RBP26.19■■□□□ 1.78
TMEM260-214ENST00000556975 LAMC2Q13753 1193 aa26.19■■□□□ 1.78
TMEM260-214ENST00000556975 RASIP1Q5U651 963 aa26.19■■□□□ 1.78
TMEM260-214ENST00000556975 FCHSD1Q86WN1 690 aa26.19■■□□□ 1.78
TMEM260-214ENST00000556975 FANCBQ8NB91 859 aa26.19■■□□□ 1.78
TMEM260-214ENST00000556975 PIBF1Q8WXW3 757 aa26.19■■□□□ 1.78
TMEM260-214ENST00000556975 LRRC2Q9BYS8 371 aa26.19■■□□□ 1.78
TMEM260-214ENST00000556975 IL23AQ9NPF7 189 aa26.19■■□□□ 1.78
TMEM260-214ENST00000556975 TRMT13Q9NUP7 481 aaKnown RBP26.19■■□□□ 1.78
TMEM260-214ENST00000556975 FRMPD4Q14CM0 1322 aa26.18■■□□□ 1.78
TMEM260-214ENST00000556975 UMODL1Q5DID0 1318 aa26.18■■□□□ 1.78
TMEM260-214ENST00000556975 CASTP20810 708 aaKnown RBP26.18■■□□□ 1.78
TMEM260-214ENST00000556975 CCND2P30279 289 aa26.18■■□□□ 1.78
TMEM260-214ENST00000556975 PSRC1Q6PGN9 363 aaPredicted RBP26.18■■□□□ 1.78
TMEM260-214ENST00000556975 DHX32Q7L7V1 743 aaKnown RBP26.18■■□□□ 1.78
TMEM260-214ENST00000556975 RASEFQ8IZ41 740 aa26.18■■□□□ 1.78
TMEM260-214ENST00000556975 IL31RAQ8NI17 732 aa26.18■■□□□ 1.78
TMEM260-214ENST00000556975 SEC63Q9UGP8 760 aaKnown RBP26.18■■□□□ 1.78
TMEM260-214ENST00000556975 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.17■■□□□ 1.78
TMEM260-214ENST00000556975 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.17■■□□□ 1.78
TMEM260-214ENST00000556975 PIK3CDO00329 1044 aa26.17■■□□□ 1.78
TMEM260-214ENST00000556975 RXRAP19793 462 aa26.17■■□□□ 1.78
TMEM260-214ENST00000556975 KRT32Q14532 448 aa26.17■■□□□ 1.78
TMEM260-214ENST00000556975 DGKDQ16760 1214 aa26.17■■□□□ 1.78
TMEM260-214ENST00000556975 ZNF697Q5TEC3 545 aa26.17■■□□□ 1.78
TMEM260-214ENST00000556975 ZNF365Q70YC5 407 aa26.17■■□□□ 1.78
TMEM260-214ENST00000556975 STAM2O75886 525 aa26.16■■□□□ 1.78
TMEM260-214ENST00000556975 FAM47CQ5HY64 1035 aa26.16■■□□□ 1.78
TMEM260-214ENST00000556975 SESTD1Q86VW0 696 aa26.16■■□□□ 1.78
TMEM260-214ENST00000556975 DHX37Q8IY37 1157 aaKnown RBP26.16■■□□□ 1.78
TMEM260-214ENST00000556975 PPTC7Q8NI37 304 aa26.16■■□□□ 1.78
TMEM260-214ENST00000556975 KAT2BQ92831 832 aa26.16■■□□□ 1.78
TMEM260-214ENST00000556975 KCNB2Q92953 911 aa26.16■■□□□ 1.78
TMEM260-214ENST00000556975 WNT8AQ9H1J5 351 aa26.16■■□□□ 1.78
TMEM260-214ENST00000556975 ACRP10323 421 aa26.15■■□□□ 1.78
TMEM260-214ENST00000556975 HOXD8P13378 290 aaPredicted RBP26.15■■□□□ 1.78
TMEM260-214ENST00000556975 CCL23P55773 120 aa26.15■■□□□ 1.78
TMEM260-214ENST00000556975 ADCK5Q3MIX3 580 aa26.15■■□□□ 1.78
TMEM260-214ENST00000556975 MYSM1Q5VVJ2 828 aa26.15■■□□□ 1.78
TMEM260-214ENST00000556975 SYNE3Q6ZMZ3 975 aa26.15■■□□□ 1.78
TMEM260-214ENST00000556975 TMTC3Q6ZXV5 915 aa26.15■■□□□ 1.78
TMEM260-214ENST00000556975 CMTR1Q8N1G2 835 aaKnown RBP26.15■■□□□ 1.78
TMEM260-214ENST00000556975 MYH7BA7E2Y1 1941 aa26.15■■□□□ 1.78
TMEM260-214ENST00000556975 MEIS2O14770 477 aa26.14■■□□□ 1.78
TMEM260-214ENST00000556975 CYP2C9P11712 490 aa26.14■■□□□ 1.78
TMEM260-214ENST00000556975 MRPS9P82933 396 aaKnown RBP26.14■■□□□ 1.78
TMEM260-214ENST00000556975 CELF3Q5SZQ8 465 aaKnown RBP26.14■■□□□ 1.78
TMEM260-214ENST00000556975 APOA5Q6Q788 366 aa26.14■■□□□ 1.78
TMEM260-214ENST00000556975 RPUSD2Q8IZ73 545 aaKnown RBP26.14■■□□□ 1.78
TMEM260-214ENST00000556975 HERVK_113Q902F9 699 aa26.14■■□□□ 1.78
TMEM260-214ENST00000556975 CUL5Q93034 780 aa26.14■■□□□ 1.78
TMEM260-214ENST00000556975 FAM161BQ96MY7 647 aa26.14■■□□□ 1.78
TMEM260-214ENST00000556975 GUCD1Q96NT3 240 aa26.14■■□□□ 1.78
TMEM260-214ENST00000556975 SEMA6BQ9H3T3 888 aa26.14■■□□□ 1.78
TMEM260-214ENST00000556975 UNC80Q8N2C7 3258 aa26.13■■□□□ 1.77
TMEM260-214ENST00000556975 TMEM265A0A087WTH1 108 aa26.13■■□□□ 1.77
TMEM260-214ENST00000556975 PPFIA4O75335 1185 aa26.13■■□□□ 1.77
TMEM260-214ENST00000556975 FGBP02675 491 aa26.13■■□□□ 1.77
TMEM260-214ENST00000556975 HMGB1P09429 215 aaKnown RBP26.13■■□□□ 1.77
TMEM260-214ENST00000556975 ICAM3P32942 547 aa26.13■■□□□ 1.77
TMEM260-214ENST00000556975 SP2Q02086 613 aa26.13■■□□□ 1.77
TMEM260-214ENST00000556975 USP17L6PQ6QN14 398 aa26.13■■□□□ 1.77
TMEM260-214ENST00000556975 MICU3Q86XE3 530 aa26.13■■□□□ 1.77
TMEM260-214ENST00000556975 RAB11FIP4Q86YS3 637 aa26.13■■□□□ 1.77
TMEM260-214ENST00000556975 SMARCC2Q8TAQ2 1214 aa26.13■■□□□ 1.77
TMEM260-214ENST00000556975 INPP4AQ96PE3 977 aaPredicted RBP26.13■■□□□ 1.77
TMEM260-214ENST00000556975 GNPTABQ3T906 1256 aa26.12■■□□□ 1.77
TMEM260-214ENST00000556975 XRRA1Q6P2D8 792 aa26.12■■□□□ 1.77
TMEM260-214ENST00000556975 PPP1R13LQ8WUF5 828 aa26.12■■□□□ 1.77
TMEM260-214ENST00000556975 VWCEQ96DN2 955 aa26.12■■□□□ 1.77
TMEM260-214ENST00000556975 RBM28Q9NW13 759 aaKnown RBP26.12■■□□□ 1.77
TMEM260-214ENST00000556975 HAS3O00219 553 aa26.11■■□□□ 1.77
TMEM260-214ENST00000556975 PITPNM1O00562 1244 aa26.11■■□□□ 1.77
TMEM260-214ENST00000556975 GGPS1O95749 300 aa26.11■■□□□ 1.77
TMEM260-214ENST00000556975 F2P00734 622 aa26.11■■□□□ 1.77
TMEM260-214ENST00000556975 UBA1P22314 1058 aaKnown RBP26.11■■□□□ 1.77
TMEM260-214ENST00000556975 HSDL1Q3SXM5 330 aa26.11■■□□□ 1.77
TMEM260-214ENST00000556975 SCLYQ96I15 445 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms