RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 NR3C2P08235 984 aa11.07□□□□□ -0.64
TMEM260-213ENST00000556929 CYP3A4P08684 503 aa11.07□□□□□ -0.64
TMEM260-213ENST00000556929 HOXC6P09630 235 aa11.07□□□□□ -0.64
TMEM260-213ENST00000556929 MYCLP12524 364 aaPredicted RBP11.07□□□□□ -0.64
TMEM260-213ENST00000556929 CYP2B6P20813 491 aa11.07□□□□□ -0.64
TMEM260-213ENST00000556929 PRMT2P55345 433 aa11.07□□□□□ -0.64
TMEM260-213ENST00000556929 UBXN2AP68543 259 aa11.07□□□□□ -0.64
TMEM260-213ENST00000556929 ARHGAP4P98171 946 aa11.07□□□□□ -0.64
TMEM260-213ENST00000556929 PDE4DQ08499 809 aa11.07□□□□□ -0.64
TMEM260-213ENST00000556929 STXBP2Q15833 593 aa11.07□□□□□ -0.64
TMEM260-213ENST00000556929 LETM2Q2VYF4 491 aa11.07□□□□□ -0.64
TMEM260-213ENST00000556929 EARS2Q5JPH6 523 aaKnown RBP11.07□□□□□ -0.64
TMEM260-213ENST00000556929 PCNX4Q63HM2 1172 aa11.07□□□□□ -0.64
TMEM260-213ENST00000556929 LHX8Q68G74 356 aa11.07□□□□□ -0.64
TMEM260-213ENST00000556929 TRMT44Q8IYL2 757 aaKnown RBP11.07□□□□□ -0.64
TMEM260-213ENST00000556929 MSL3Q8N5Y2 521 aaKnown RBP11.07□□□□□ -0.64
TMEM260-213ENST00000556929 USP6NLQ92738 828 aa11.07□□□□□ -0.64
TMEM260-213ENST00000556929 PURBQ96QR8 312 aaKnown RBP11.07□□□□□ -0.64
TMEM260-213ENST00000556929 ARHGAP39Q9C0H5 1083 aa11.07□□□□□ -0.64
TMEM260-213ENST00000556929 GJD2Q9UKL4 321 aa11.07□□□□□ -0.64
TMEM260-213ENST00000556929 FAM205CA6NFA0 338 aa11.06□□□□□ -0.64
TMEM260-213ENST00000556929 CCNT1O60563 726 aaKnown RBP11.06□□□□□ -0.64
TMEM260-213ENST00000556929 GCFC2P16383 781 aaKnown RBP11.06□□□□□ -0.64
TMEM260-213ENST00000556929 ATP2B1P20020 1258 aa11.06□□□□□ -0.64
TMEM260-213ENST00000556929 FLT3LGP49771 235 aa11.06□□□□□ -0.64
TMEM260-213ENST00000556929 ORC2Q13416 577 aaPredicted RBP11.06□□□□□ -0.64
TMEM260-213ENST00000556929 TTC38Q5R3I4 469 aa11.06□□□□□ -0.64
TMEM260-213ENST00000556929 ATL3Q6DD88 541 aa11.06□□□□□ -0.64
TMEM260-213ENST00000556929 MOXD1Q6UVY6 613 aa11.06□□□□□ -0.64
TMEM260-213ENST00000556929 NLRX1Q86UT6 975 aa11.06□□□□□ -0.64
TMEM260-213ENST00000556929 VSIG10LQ86VR7 867 aa11.06□□□□□ -0.64
TMEM260-213ENST00000556929 NPLOC4Q8TAT6 608 aa11.06□□□□□ -0.64
TMEM260-213ENST00000556929 CRYGNQ8WXF5 182 aa11.06□□□□□ -0.64
TMEM260-213ENST00000556929 FAM212AQ96EL1 285 aa11.06□□□□□ -0.64
TMEM260-213ENST00000556929 MAML3Q96JK9 1138 aa11.06□□□□□ -0.64
TMEM260-213ENST00000556929 APBA2Q99767 749 aa11.06□□□□□ -0.64
TMEM260-213ENST00000556929 SRRDQ9UH36 339 aa11.06□□□□□ -0.64
TMEM260-213ENST00000556929 CFAP45Q9UL16 551 aa11.06□□□□□ -0.64
TMEM260-213ENST00000556929 CEP131Q9UPN4 1083 aa11.06□□□□□ -0.64
TMEM260-213ENST00000556929 MAP3K13O43283 966 aa11.05□□□□□ -0.64
TMEM260-213ENST00000556929 EIF3JO75822 258 aaKnown RBP11.05□□□□□ -0.64
TMEM260-213ENST00000556929 HSPA1AP0DMV8 641 aaKnown RBP11.05□□□□□ -0.64
TMEM260-213ENST00000556929 HSPA1BP0DMV9 641 aaKnown RBP11.05□□□□□ -0.64
TMEM260-213ENST00000556929 XRCC5P13010 732 aaKnown RBP11.05□□□□□ -0.64
TMEM260-213ENST00000556929 EDNRBP24530 442 aa11.05□□□□□ -0.64
TMEM260-213ENST00000556929 CIITAP33076 1130 aa11.05□□□□□ -0.64
TMEM260-213ENST00000556929 CTCFP49711 727 aaPredicted RBP11.05□□□□□ -0.64
TMEM260-213ENST00000556929 PRKCZQ05513 592 aa11.05□□□□□ -0.64
TMEM260-213ENST00000556929 IRF5Q13568 498 aa11.05□□□□□ -0.64
TMEM260-213ENST00000556929 GNPTABQ3T906 1256 aa11.05□□□□□ -0.64
TMEM260-213ENST00000556929 OLFML2BQ68BL8 750 aa11.05□□□□□ -0.64
TMEM260-213ENST00000556929 PPP4R3AQ6IN85 833 aa11.05□□□□□ -0.64
TMEM260-213ENST00000556929 MAMDC4Q6UXC1 1216 aa11.05□□□□□ -0.64
TMEM260-213ENST00000556929 FGD4Q96M96 766 aa11.05□□□□□ -0.64
TMEM260-213ENST00000556929 MXRA8Q9BRK3 442 aa11.05□□□□□ -0.64
TMEM260-213ENST00000556929 TINF2Q9BSI4 451 aa11.05□□□□□ -0.64
TMEM260-213ENST00000556929 GABRQQ9UN88 632 aa11.05□□□□□ -0.64
TMEM260-213ENST00000556929 TRIM17Q9Y577 477 aa11.05□□□□□ -0.64
TMEM260-213ENST00000556929 SYNGAP1Q96PV0 1343 aa11.05□□□□□ -0.64
TMEM260-213ENST00000556929 CYP3A7-CYP3A51PA0A087WV96 503 aa11.04□□□□□ -0.64
TMEM260-213ENST00000556929 FOXN1O15353 648 aa11.04□□□□□ -0.64
TMEM260-213ENST00000556929 MAFGO15525 162 aa11.04□□□□□ -0.64
TMEM260-213ENST00000556929 MARCH6O60337 910 aa11.04□□□□□ -0.64
TMEM260-213ENST00000556929 BMP15O95972 392 aa11.04□□□□□ -0.64
TMEM260-213ENST00000556929 HSPA8P11142 646 aaKnown RBP11.04□□□□□ -0.64
TMEM260-213ENST00000556929 CYP3A7P24462 503 aa11.04□□□□□ -0.64
TMEM260-213ENST00000556929 TOB1P50616 345 aaPredicted RBP11.04□□□□□ -0.64
TMEM260-213ENST00000556929 KRT85P78386 507 aa11.04□□□□□ -0.64
TMEM260-213ENST00000556929 MRPS9P82933 396 aaKnown RBP11.04□□□□□ -0.64
TMEM260-213ENST00000556929 SETQ01105 290 aaPredicted RBP11.04□□□□□ -0.64
TMEM260-213ENST00000556929 ZNF174Q15697 407 aa11.04□□□□□ -0.64
TMEM260-213ENST00000556929 FOXD4L6Q3SYB3 417 aaPredicted RBP11.04□□□□□ -0.64
TMEM260-213ENST00000556929 Q4G0T1 1027 aa11.04□□□□□ -0.64
TMEM260-213ENST00000556929 CEP55Q53EZ4 464 aa11.04□□□□□ -0.64
TMEM260-213ENST00000556929 FAM173BQ6P4H8 233 aa11.04□□□□□ -0.64
TMEM260-213ENST00000556929 FOXD4L3Q6VB84 417 aaPredicted RBP11.04□□□□□ -0.64
TMEM260-213ENST00000556929 ARMCX2Q7L311 632 aa11.04□□□□□ -0.64
TMEM260-213ENST00000556929 NIPA1Q7RTP0 329 aa11.04□□□□□ -0.64
TMEM260-213ENST00000556929 IL31RAQ8NI17 732 aa11.04□□□□□ -0.64
TMEM260-213ENST00000556929 RAET1EQ8TD07 263 aa11.04□□□□□ -0.64
TMEM260-213ENST00000556929 MORC4Q8TE76 937 aa11.04□□□□□ -0.64
TMEM260-213ENST00000556929 CDHR1Q96JP9 859 aa11.04□□□□□ -0.64
TMEM260-213ENST00000556929 ABHD16BQ9H3Z7 469 aa11.04□□□□□ -0.64
TMEM260-213ENST00000556929 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.04□□□□□ -0.64
TMEM260-213ENST00000556929 RTEL1Q9NZ71 1219 aa11.04□□□□□ -0.64
TMEM260-213ENST00000556929 DDX25Q9UHL0 483 aaKnown RBP11.04□□□□□ -0.64
TMEM260-213ENST00000556929 UBIAD1Q9Y5Z9 338 aa11.04□□□□□ -0.64
TMEM260-213ENST00000556929 ASTN1O14525 1302 aa11.04□□□□□ -0.64
TMEM260-213ENST00000556929 LAD1O00515 517 aa11.03□□□□□ -0.64
TMEM260-213ENST00000556929 BAG4O95429 457 aaKnown RBP11.03□□□□□ -0.64
TMEM260-213ENST00000556929 TDP2O95551 362 aa11.03□□□□□ -0.64
TMEM260-213ENST00000556929 NCLP19338 710 aaKnown RBP11.03□□□□□ -0.64
TMEM260-213ENST00000556929 MCM7P33993 719 aa11.03□□□□□ -0.64
TMEM260-213ENST00000556929 DNM1Q05193 864 aaKnown RBP11.03□□□□□ -0.64
TMEM260-213ENST00000556929 SF3A1Q15459 793 aaKnown RBP11.03□□□□□ -0.64
TMEM260-213ENST00000556929 MFSD14CQ5VZR4 134 aa11.03□□□□□ -0.64
TMEM260-213ENST00000556929 ANO1Q5XXA6 986 aa11.03□□□□□ -0.64
TMEM260-213ENST00000556929 KCNV1Q6PIU1 500 aa11.03□□□□□ -0.64
TMEM260-213ENST00000556929 OTOP1Q7RTM1 612 aa11.03□□□□□ -0.64
TMEM260-213ENST00000556929 PLA2G4DQ86XP0 818 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms