RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 BFSP2Q13515 415 aa17.26■□□□□ 0.35
CHD8-211ENST00000556833 ARHGEF16Q5VV41 709 aa17.26■□□□□ 0.35
CHD8-211ENST00000556833 CCDC62Q6P9F0 684 aa17.26■□□□□ 0.35
CHD8-211ENST00000556833 FBXO11Q86XK2 927 aa17.26■□□□□ 0.35
CHD8-211ENST00000556833 DGKHQ86XP1 1220 aa17.26■□□□□ 0.35
CHD8-211ENST00000556833 STAG2Q8N3U4 1231 aa17.26■□□□□ 0.35
CHD8-211ENST00000556833 PNMA2Q9UL42 364 aa17.26■□□□□ 0.35
CHD8-211ENST00000556833 DOCK5Q9H7D0 1870 aa17.26■□□□□ 0.35
CHD8-211ENST00000556833 PITPNM1O00562 1244 aa17.25■□□□□ 0.35
CHD8-211ENST00000556833 KPNA6O60684 536 aa17.25■□□□□ 0.35
CHD8-211ENST00000556833 MYCLP12524 364 aaPredicted RBP17.25■□□□□ 0.35
CHD8-211ENST00000556833 HERC6Q8IVU3 1022 aa17.25■□□□□ 0.35
CHD8-211ENST00000556833 NSUN6Q8TEA1 469 aaKnown RBP17.25■□□□□ 0.35
CHD8-211ENST00000556833 DHX38Q92620 1227 aaKnown RBP17.25■□□□□ 0.35
CHD8-211ENST00000556833 KAT2BQ92831 832 aa17.25■□□□□ 0.35
CHD8-211ENST00000556833 CTAGE1Q96RT6 745 aa17.25■□□□□ 0.35
CHD8-211ENST00000556833 SLC9A7Q96T83 725 aa17.25■□□□□ 0.35
CHD8-211ENST00000556833 IL25Q9H293 177 aa17.25■□□□□ 0.35
CHD8-211ENST00000556833 RWDD1Q9H446 243 aaPredicted RBP17.25■□□□□ 0.35
CHD8-211ENST00000556833 JMJD4Q9H9V9 463 aa17.25■□□□□ 0.35
CHD8-211ENST00000556833 ZSWIM5Q9P217 1185 aa17.25■□□□□ 0.35
CHD8-211ENST00000556833 LCHNA4D1U4 455 aa17.24■□□□□ 0.35
CHD8-211ENST00000556833 COL9A1P20849 921 aa17.24■□□□□ 0.35
CHD8-211ENST00000556833 RFC2P35250 354 aa17.24■□□□□ 0.35
CHD8-211ENST00000556833 KCNJ6P48051 423 aa17.24■□□□□ 0.35
CHD8-211ENST00000556833 DEFB103AP81534 67 aa17.24■□□□□ 0.35
CHD8-211ENST00000556833 ZNF200P98182 395 aaPredicted RBP17.24■□□□□ 0.35
CHD8-211ENST00000556833 TAP1Q03518 808 aa17.24■□□□□ 0.35
CHD8-211ENST00000556833 STXBP2Q15833 593 aa17.24■□□□□ 0.35
CHD8-211ENST00000556833 IMMTQ16891 758 aaKnown RBP17.24■□□□□ 0.35
CHD8-211ENST00000556833 TCTN1Q2MV58 587 aa17.24■□□□□ 0.35
CHD8-211ENST00000556833 ASPRV1Q53RT3 343 aa17.24■□□□□ 0.35
CHD8-211ENST00000556833 FAM117BQ6P1L5 589 aa17.24■□□□□ 0.35
CHD8-211ENST00000556833 SMC5Q8IY18 1101 aa17.24■□□□□ 0.35
CHD8-211ENST00000556833 EXOC6Q8TAG9 804 aa17.24■□□□□ 0.35
CHD8-211ENST00000556833 UBAC1Q9BSL1 405 aa17.24■□□□□ 0.35
CHD8-211ENST00000556833 TSPYL2Q9H2G4 693 aaPredicted RBP17.24■□□□□ 0.35
CHD8-211ENST00000556833 HDAC6Q9UBN7 1215 aa17.24■□□□□ 0.35
CHD8-211ENST00000556833 MTUS1Q9ULD2 1270 aa17.24■□□□□ 0.35
CHD8-211ENST00000556833 MTCH2Q9Y6C9 303 aa17.24■□□□□ 0.35
CHD8-211ENST00000556833 MRVI1Q9Y6F6 885 aa17.24■□□□□ 0.35
CHD8-211ENST00000556833 GTPBP6O43824 516 aaPredicted RBP17.23■□□□□ 0.35
CHD8-211ENST00000556833 TLL1O43897 1013 aa17.23■□□□□ 0.35
CHD8-211ENST00000556833 HOXA13P31271 388 aaPredicted RBP17.23■□□□□ 0.35
CHD8-211ENST00000556833 NUCB1Q02818 461 aa17.23■□□□□ 0.35
CHD8-211ENST00000556833 LRRC8DQ7L1W4 858 aa17.23■□□□□ 0.35
CHD8-211ENST00000556833 HOMER1Q86YM7 354 aa17.23■□□□□ 0.35
CHD8-211ENST00000556833 GDPD5Q8WTR4 605 aa17.23■□□□□ 0.35
CHD8-211ENST00000556833 PXMP2Q9NR77 195 aa17.23■□□□□ 0.35
CHD8-211ENST00000556833 MRPL11Q9Y3B7 192 aaKnown RBP17.23■□□□□ 0.35
CHD8-211ENST00000556833 OPLAHO14841 1288 aa17.22■□□□□ 0.35
CHD8-211ENST00000556833 PPP1R11O60927 126 aaPredicted RBP17.22■□□□□ 0.35
CHD8-211ENST00000556833 CASTP20810 708 aaKnown RBP17.22■□□□□ 0.35
CHD8-211ENST00000556833 PSEN2P49810 448 aa17.22■□□□□ 0.35
CHD8-211ENST00000556833 WDR5P61964 334 aaKnown RBP17.22■□□□□ 0.35
CHD8-211ENST00000556833 PTPN11Q06124 597 aaPredicted RBP17.22■□□□□ 0.35
CHD8-211ENST00000556833 GPNMBQ14956 572 aa17.22■□□□□ 0.35
CHD8-211ENST00000556833 DGKDQ16760 1214 aa17.22■□□□□ 0.35
CHD8-211ENST00000556833 IFIT1BQ5T764 474 aaKnown RBP17.22■□□□□ 0.35
CHD8-211ENST00000556833 CYB5R4Q7L1T6 521 aa17.22■□□□□ 0.35
CHD8-211ENST00000556833 MCF2L2Q86YR7 1114 aa17.22■□□□□ 0.35
CHD8-211ENST00000556833 CCDC155Q8N6L0 562 aa17.22■□□□□ 0.35
CHD8-211ENST00000556833 C7orf31Q8N865 590 aa17.22■□□□□ 0.35
CHD8-211ENST00000556833 RGS22Q8NE09 1264 aa17.22■□□□□ 0.35
CHD8-211ENST00000556833 IL31RAQ8NI17 732 aa17.22■□□□□ 0.35
CHD8-211ENST00000556833 PIBF1Q8WXW3 757 aa17.22■□□□□ 0.35
CHD8-211ENST00000556833 WNT8BQ93098 351 aa17.22■□□□□ 0.35
CHD8-211ENST00000556833 ZBED2Q9BTP6 218 aa17.22■□□□□ 0.35
CHD8-211ENST00000556833 DDX41Q9UJV9 622 aaKnown RBP17.22■□□□□ 0.35
CHD8-211ENST00000556833 KIF28PB7ZC32 967 aa17.21■□□□□ 0.35
CHD8-211ENST00000556833 NBNO60934 754 aa17.21■□□□□ 0.35
CHD8-211ENST00000556833 NR3C2P08235 984 aa17.21■□□□□ 0.35
CHD8-211ENST00000556833 SELPP16109 830 aa17.21■□□□□ 0.35
CHD8-211ENST00000556833 MFSD10Q14728 455 aa17.21■□□□□ 0.35
CHD8-211ENST00000556833 KIAA0753Q2KHM9 967 aa17.21■□□□□ 0.35
CHD8-211ENST00000556833 CCDC178Q5BJE1 867 aa17.21■□□□□ 0.35
CHD8-211ENST00000556833 DHX37Q8IY37 1157 aaKnown RBP17.21■□□□□ 0.35
CHD8-211ENST00000556833 AFAP1L1Q8TED9 768 aa17.21■□□□□ 0.35
CHD8-211ENST00000556833 GPKOWQ92917 476 aaPredicted RBP eCLIP17.21■□□□□ 0.35
CHD8-211ENST00000556833 DSCC1Q9BVC3 393 aa17.21■□□□□ 0.35
CHD8-211ENST00000556833 BRWD1Q9NSI6 2320 aa17.21■□□□□ 0.35
CHD8-211ENST00000556833 KLRF2D3W0D1 207 aa17.2■□□□□ 0.34
CHD8-211ENST00000556833 CKBP12277 381 aa17.2■□□□□ 0.34
CHD8-211ENST00000556833 GRB10Q13322 594 aa17.2■□□□□ 0.34
CHD8-211ENST00000556833 CAGE1Q8TC20 777 aa17.2■□□□□ 0.34
CHD8-211ENST00000556833 ANKS1AQ92625 1134 aa17.2■□□□□ 0.34
CHD8-211ENST00000556833 IWS1Q96ST2 819 aa17.2■□□□□ 0.34
CHD8-211ENST00000556833 AMNQ9BXJ7 453 aa17.2■□□□□ 0.34
CHD8-211ENST00000556833 KRT23Q9C075 422 aa17.2■□□□□ 0.34
CHD8-211ENST00000556833 GTF2IRD1Q9UHL9 959 aa17.2■□□□□ 0.34
CHD8-211ENST00000556833 SIP14410 1827 aa17.19■□□□□ 0.34
CHD8-211ENST00000556833 BAIAP3O94812 1187 aa17.19■□□□□ 0.34
CHD8-211ENST00000556833 BMP1P13497 986 aa17.19■□□□□ 0.34
CHD8-211ENST00000556833 HIC1Q14526 733 aa17.19■□□□□ 0.34
CHD8-211ENST00000556833 FCHSD1Q86WN1 690 aa17.19■□□□□ 0.34
CHD8-211ENST00000556833 TICAM2Q86XR7 235 aa17.19■□□□□ 0.34
CHD8-211ENST00000556833 PHOSPHO2Q8TCD6 241 aa17.19■□□□□ 0.34
CHD8-211ENST00000556833 OSBPL3Q9H4L5 887 aa17.19■□□□□ 0.34
CHD8-211ENST00000556833 SENP2Q9HC62 589 aa17.19■□□□□ 0.34
CHD8-211ENST00000556833 MAD2L2Q9UI95 211 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms