RNA–Protein interactions for RNA: ENST00000556636.5

GABRB3-211, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-211ENST00000556636 MYCLP12524 364 aaPredicted RBP12.34□□□□□ -0.43
GABRB3-211ENST00000556636 IFNAR1P17181 557 aa12.34□□□□□ -0.43
GABRB3-211ENST00000556636 SP2Q02086 613 aa12.34□□□□□ -0.43
GABRB3-211ENST00000556636 TLE2Q04725 743 aa12.34□□□□□ -0.43
GABRB3-211ENST00000556636 TTLL4Q14679 1199 aa12.34□□□□□ -0.43
GABRB3-211ENST00000556636 UBE2SQ16763 222 aa12.34□□□□□ -0.43
GABRB3-211ENST00000556636 PFKFB3Q16875 520 aaPredicted RBP12.34□□□□□ -0.43
GABRB3-211ENST00000556636 TRIM60Q495X7 471 aa12.34□□□□□ -0.43
GABRB3-211ENST00000556636 CXCL17Q6UXB2 119 aa12.34□□□□□ -0.43
GABRB3-211ENST00000556636 SLC43A3Q8NBI5 491 aa12.34□□□□□ -0.43
GABRB3-211ENST00000556636 PHKBQ93100 1093 aa12.34□□□□□ -0.43
GABRB3-211ENST00000556636 ALPK3Q96L96 1907 aa12.34□□□□□ -0.43
GABRB3-211ENST00000556636 RANBP2P49792 3224 aaKnown RBP12.34□□□□□ -0.43
GABRB3-211ENST00000556636 MYH6P13533 1939 aa12.33□□□□□ -0.44
GABRB3-211ENST00000556636 EIF5BO60841 1220 aaKnown RBP12.33□□□□□ -0.44
GABRB3-211ENST00000556636 SYN1P17600 705 aa12.33□□□□□ -0.44
GABRB3-211ENST00000556636 ARHGAP1Q07960 439 aa12.33□□□□□ -0.44
GABRB3-211ENST00000556636 ANKRD33Q7Z3H0 272 aa12.33□□□□□ -0.44
GABRB3-211ENST00000556636 SH3RF1Q7Z6J0 888 aa12.33□□□□□ -0.44
GABRB3-211ENST00000556636 OR6J1Q8NGC5 347 aa12.33□□□□□ -0.44
GABRB3-211ENST00000556636 SMARCC2Q8TAQ2 1214 aa12.33□□□□□ -0.44
GABRB3-211ENST00000556636 CUL5Q93034 780 aa12.33□□□□□ -0.44
GABRB3-211ENST00000556636 KIF2CQ99661 725 aa12.33□□□□□ -0.44
GABRB3-211ENST00000556636 GDF15Q99988 308 aa12.33□□□□□ -0.44
GABRB3-211ENST00000556636 BCAS3Q9H6U6 928 aa12.33□□□□□ -0.44
GABRB3-211ENST00000556636 RIC8AQ9NPQ8 531 aa12.33□□□□□ -0.44
GABRB3-211ENST00000556636 STARD7Q9NQZ5 370 aa12.33□□□□□ -0.44
GABRB3-211ENST00000556636 TPCN1Q9ULQ1 816 aa12.33□□□□□ -0.44
GABRB3-211ENST00000556636 COLQQ9Y215 455 aaPredicted RBP12.33□□□□□ -0.44
GABRB3-211ENST00000556636 ATP11BQ9Y2G3 1177 aa12.33□□□□□ -0.44
GABRB3-211ENST00000556636 LRRC37A2A6NM11 1700 aa12.33□□□□□ -0.44
GABRB3-211ENST00000556636 SMCO2A6NFE2 343 aa12.32□□□□□ -0.44
GABRB3-211ENST00000556636 SPATA31C2B4DYI2 1134 aa12.32□□□□□ -0.44
GABRB3-211ENST00000556636 hCG_1984214I3L0E3 225 aa12.32□□□□□ -0.44
GABRB3-211ENST00000556636 ARVCFO00192 962 aa12.32□□□□□ -0.44
GABRB3-211ENST00000556636 SCG2P13521 617 aa12.32□□□□□ -0.44
GABRB3-211ENST00000556636 CCND2P30279 289 aa12.32□□□□□ -0.44
GABRB3-211ENST00000556636 ICAM3P32942 547 aa12.32□□□□□ -0.44
GABRB3-211ENST00000556636 CLK2P49760 499 aaKnown RBP12.32□□□□□ -0.44
GABRB3-211ENST00000556636 AK2P54819 239 aa12.32□□□□□ -0.44
GABRB3-211ENST00000556636 NAPAP54920 295 aa12.32□□□□□ -0.44
GABRB3-211ENST00000556636 PURAQ00577 322 aaKnown RBP12.32□□□□□ -0.44
GABRB3-211ENST00000556636 FAAP100Q0VG06 881 aa12.32□□□□□ -0.44
GABRB3-211ENST00000556636 SEMA3FQ13275 785 aa12.32□□□□□ -0.44
GABRB3-211ENST00000556636 PCNX4Q63HM2 1172 aa12.32□□□□□ -0.44
GABRB3-211ENST00000556636 PPP1R18Q6NYC8 613 aa12.32□□□□□ -0.44
GABRB3-211ENST00000556636 ZNF713Q8N859 430 aaPredicted RBP12.32□□□□□ -0.44
GABRB3-211ENST00000556636 AFG1LQ8WV93 481 aa12.32□□□□□ -0.44
GABRB3-211ENST00000556636 GLT1D1Q96MS3 346 aa12.32□□□□□ -0.44
GABRB3-211ENST00000556636 TOX2Q96NM4 488 aa12.32□□□□□ -0.44
GABRB3-211ENST00000556636 INPP4AQ96PE3 977 aaPredicted RBP12.32□□□□□ -0.44
GABRB3-211ENST00000556636 RNF26Q9BY78 433 aaPredicted RBP12.32□□□□□ -0.44
GABRB3-211ENST00000556636 RTEL1Q9NZ71 1219 aa12.32□□□□□ -0.44
GABRB3-211ENST00000556636 PCDHA6Q9UN73 950 aa12.32□□□□□ -0.44
GABRB3-211ENST00000556636 PCDHA8Q9Y5H6 950 aa12.32□□□□□ -0.44
GABRB3-211ENST00000556636 TRIM43BA6NCK2 446 aa12.31□□□□□ -0.44
GABRB3-211ENST00000556636 ZEB2O60315 1214 aa12.31□□□□□ -0.44
GABRB3-211ENST00000556636 PFKFB2O60825 505 aa12.31□□□□□ -0.44
GABRB3-211ENST00000556636 STAM2O75886 525 aa12.31□□□□□ -0.44
GABRB3-211ENST00000556636 CABYRO75952 493 aa12.31□□□□□ -0.44
GABRB3-211ENST00000556636 GH1P01241 217 aa12.31□□□□□ -0.44
GABRB3-211ENST00000556636 TGFB3P10600 412 aa12.31□□□□□ -0.44
GABRB3-211ENST00000556636 ITGB8P26012 769 aa12.31□□□□□ -0.44
GABRB3-211ENST00000556636 CPT1AP50416 773 aa12.31□□□□□ -0.44
GABRB3-211ENST00000556636 SCRN1Q12765 414 aa12.31□□□□□ -0.44
GABRB3-211ENST00000556636 STK3Q13188 491 aa12.31□□□□□ -0.44
GABRB3-211ENST00000556636 MYSM1Q5VVJ2 828 aa12.31□□□□□ -0.44
GABRB3-211ENST00000556636 XRRA1Q6P2D8 792 aa12.31□□□□□ -0.44
GABRB3-211ENST00000556636 TEX2Q8IWB9 1127 aa12.31□□□□□ -0.44
GABRB3-211ENST00000556636 EMID1Q96A84 441 aaPredicted RBP12.31□□□□□ -0.44
GABRB3-211ENST00000556636 VTI1AQ96AJ9 217 aa12.31□□□□□ -0.44
GABRB3-211ENST00000556636 TRIM43Q96BQ3 446 aaPredicted RBP12.31□□□□□ -0.44
GABRB3-211ENST00000556636 SLC26A6Q9BXS9 759 aa12.31□□□□□ -0.44
GABRB3-211ENST00000556636 ZMYND12Q9H0C1 365 aa12.31□□□□□ -0.44
GABRB3-211ENST00000556636 PDLIM7Q9NR12 457 aa12.31□□□□□ -0.44
GABRB3-211ENST00000556636 RBM27Q9P2N5 1060 aaKnown RBP12.31□□□□□ -0.44
GABRB3-211ENST00000556636 MRVI1Q9Y6F6 885 aa12.31□□□□□ -0.44
GABRB3-211ENST00000556636 A0A0U1RQG5 324 aaPredicted RBP12.3□□□□□ -0.44
GABRB3-211ENST00000556636 ESYT2A0FGR8 921 aa12.3□□□□□ -0.44
GABRB3-211ENST00000556636 CTDNEP1O95476 244 aa12.3□□□□□ -0.44
GABRB3-211ENST00000556636 HOXD8P13378 290 aaPredicted RBP12.3□□□□□ -0.44
GABRB3-211ENST00000556636 ITGB5P18084 799 aa12.3□□□□□ -0.44
GABRB3-211ENST00000556636 BMP8BP34820 402 aa12.3□□□□□ -0.44
GABRB3-211ENST00000556636 MAGEA10P43363 369 aaPredicted RBP12.3□□□□□ -0.44
GABRB3-211ENST00000556636 NEK4P51957 841 aa12.3□□□□□ -0.44
GABRB3-211ENST00000556636 PSMC6P62333 389 aa12.3□□□□□ -0.44
GABRB3-211ENST00000556636 ITGA7Q13683 1181 aa12.3□□□□□ -0.44
GABRB3-211ENST00000556636 LAMC2Q13753 1193 aa12.3□□□□□ -0.44
GABRB3-211ENST00000556636 ME3Q16798 604 aa12.3□□□□□ -0.44
GABRB3-211ENST00000556636 CELF3Q5SZQ8 465 aaKnown RBP12.3□□□□□ -0.44
GABRB3-211ENST00000556636 KCNV1Q6PIU1 500 aa12.3□□□□□ -0.44
GABRB3-211ENST00000556636 CHRDL2Q6WN34 429 aa12.3□□□□□ -0.44
GABRB3-211ENST00000556636 FAM126BQ8IXS8 530 aa12.3□□□□□ -0.44
GABRB3-211ENST00000556636 PGBD1Q96JS3 809 aa12.3□□□□□ -0.44
GABRB3-211ENST00000556636 POLR3EQ9NVU0 708 aa12.3□□□□□ -0.44
GABRB3-211ENST00000556636 TMEM260Q9NX78 707 aa12.3□□□□□ -0.44
GABRB3-211ENST00000556636 UBIAD1Q9Y5Z9 338 aa12.3□□□□□ -0.44
GABRB3-211ENST00000556636 KIAA0355O15063 1070 aa12.29□□□□□ -0.44
GABRB3-211ENST00000556636 EDIL3O43854 480 aa12.29□□□□□ -0.44
GABRB3-211ENST00000556636 KPNA6O60684 536 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms