RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 SLC30A10Q6XR72 485 aa20.52■□□□□ 0.88
SDR39U1-220ENST00000556548 CPXCR1Q8N123 301 aa20.52■□□□□ 0.88
SDR39U1-220ENST00000556548 ETNPPLQ8TBG4 499 aa20.52■□□□□ 0.88
SDR39U1-220ENST00000556548 LENG9Q96B70 501 aa20.52■□□□□ 0.88
SDR39U1-220ENST00000556548 MBOAT7Q96N66 472 aa20.52■□□□□ 0.88
SDR39U1-220ENST00000556548 SPON1Q9HCB6 807 aa20.52■□□□□ 0.88
SDR39U1-220ENST00000556548 GGA3Q9NZ52 723 aa20.52■□□□□ 0.88
SDR39U1-220ENST00000556548 R3HCC1Q9Y3T6 440 aaKnown RBP20.52■□□□□ 0.88
SDR39U1-220ENST00000556548 PIK3CDO00329 1044 aa20.52■□□□□ 0.87
SDR39U1-220ENST00000556548 TEX33O43247 280 aa20.52■□□□□ 0.87
SDR39U1-220ENST00000556548 SSBP05455 408 aaKnown RBP eCLIP20.52■□□□□ 0.87
SDR39U1-220ENST00000556548 LMNB1P20700 586 aa20.52■□□□□ 0.87
SDR39U1-220ENST00000556548 HIRAP54198 1017 aaPredicted RBP20.52■□□□□ 0.87
SDR39U1-220ENST00000556548 SPP2Q13103 211 aa20.52■□□□□ 0.87
SDR39U1-220ENST00000556548 PRKG1Q13976 671 aa20.52■□□□□ 0.87
SDR39U1-220ENST00000556548 TMEM119Q4V9L6 283 aa20.52■□□□□ 0.87
SDR39U1-220ENST00000556548 GIMAP8Q8ND71 665 aaPredicted RBP20.52■□□□□ 0.87
SDR39U1-220ENST00000556548 WRNIP1Q96S55 665 aa20.52■□□□□ 0.87
SDR39U1-220ENST00000556548 STK17AQ9UEE5 414 aa20.52■□□□□ 0.87
SDR39U1-220ENST00000556548 CCPG1Q9ULG6 757 aa20.52■□□□□ 0.87
SDR39U1-220ENST00000556548 KIAA1024Q9UPX6 916 aa20.52■□□□□ 0.87
SDR39U1-220ENST00000556548 POTEB3A0JP26 581 aa20.51■□□□□ 0.87
SDR39U1-220ENST00000556548 POTECB2RU33 542 aa20.51■□□□□ 0.87
SDR39U1-220ENST00000556548 PLA2G6O60733 806 aa20.51■□□□□ 0.87
SDR39U1-220ENST00000556548 SFPQP23246 707 aaKnown RBP eCLIP20.51■□□□□ 0.87
SDR39U1-220ENST00000556548 MCTP2Q6DN12 878 aa20.51■□□□□ 0.87
SDR39U1-220ENST00000556548 POTEBQ6S5H4 581 aa20.51■□□□□ 0.87
SDR39U1-220ENST00000556548 DLK2Q6UY11 383 aa20.51■□□□□ 0.87
SDR39U1-220ENST00000556548 EEF2KMTQ96G04 330 aa20.51■□□□□ 0.87
SDR39U1-220ENST00000556548 MRPL11Q9Y3B7 192 aaKnown RBP20.51■□□□□ 0.87
SDR39U1-220ENST00000556548 NCAPH2Q6IBW4 605 aa20.5■□□□□ 0.87
SDR39U1-220ENST00000556548 APTXQ7Z2E3 356 aaKnown RBP20.5■□□□□ 0.87
SDR39U1-220ENST00000556548 MAP7D2Q96T17 732 aa20.5■□□□□ 0.87
SDR39U1-220ENST00000556548 SLF1Q9BQI6 1058 aa20.5■□□□□ 0.87
SDR39U1-220ENST00000556548 KIAA1683Q9H0B3 1180 aa20.5■□□□□ 0.87
SDR39U1-220ENST00000556548 SLC39A2Q9NP94 309 aa20.5■□□□□ 0.87
SDR39U1-220ENST00000556548 ATAD5Q96QE3 1844 aa20.5■□□□□ 0.87
SDR39U1-220ENST00000556548 E9PMD0 336 aa20.5■□□□□ 0.87
SDR39U1-220ENST00000556548 MSH4O15457 936 aa20.5■□□□□ 0.87
SDR39U1-220ENST00000556548 IDEP14735 1019 aa20.5■□□□□ 0.87
SDR39U1-220ENST00000556548 NR1I3Q14994 352 aa20.5■□□□□ 0.87
SDR39U1-220ENST00000556548 Q4G0T1 1027 aa20.5■□□□□ 0.87
SDR39U1-220ENST00000556548 MOXD1Q6UVY6 613 aa20.5■□□□□ 0.87
SDR39U1-220ENST00000556548 SLFN12Q8IYM2 578 aa20.5■□□□□ 0.87
SDR39U1-220ENST00000556548 CCDC47Q96A33 483 aaKnown RBP20.5■□□□□ 0.87
SDR39U1-220ENST00000556548 HOOK2Q96ED9 719 aa20.5■□□□□ 0.87
SDR39U1-220ENST00000556548 HOMER2Q9NSB8 354 aa20.5■□□□□ 0.87
SDR39U1-220ENST00000556548 WDR46O15213 610 aaKnown RBP20.49■□□□□ 0.87
SDR39U1-220ENST00000556548 FLOT1O75955 427 aa20.49■□□□□ 0.87
SDR39U1-220ENST00000556548 TRAF1Q13077 416 aa20.49■□□□□ 0.87
SDR39U1-220ENST00000556548 DCAF15Q66K64 600 aa20.49■□□□□ 0.87
SDR39U1-220ENST00000556548 GPC2Q8N158 579 aa20.49■□□□□ 0.87
SDR39U1-220ENST00000556548 PRPF38AQ8NAV1 312 aaKnown RBP20.49■□□□□ 0.87
SDR39U1-220ENST00000556548 CCDC150Q8NCX0 1101 aa20.49■□□□□ 0.87
SDR39U1-220ENST00000556548 EMILIN3Q9NT22 766 aa20.49■□□□□ 0.87
SDR39U1-220ENST00000556548 ZNF536O15090 1300 aa20.49■□□□□ 0.87
SDR39U1-220ENST00000556548 A0A1B0GTH6 734 aa20.49■□□□□ 0.87
SDR39U1-220ENST00000556548 MED24O75448 989 aa20.49■□□□□ 0.87
SDR39U1-220ENST00000556548 DDNO94850 711 aaPredicted RBP20.49■□□□□ 0.87
SDR39U1-220ENST00000556548 VCAM1P19320 739 aa20.49■□□□□ 0.87
SDR39U1-220ENST00000556548 STIM1Q13586 685 aa20.49■□□□□ 0.87
SDR39U1-220ENST00000556548 DDX12PQ92771 950 aa20.49■□□□□ 0.87
SDR39U1-220ENST00000556548 RAVER2Q9HCJ3 691 aaKnown RBP20.49■□□□□ 0.87
SDR39U1-220ENST00000556548 APOBEC3FQ8IUX4 373 aaKnown RBP20.48■□□□□ 0.87
SDR39U1-220ENST00000556548 LPAR1Q92633 364 aa20.48■□□□□ 0.87
SDR39U1-220ENST00000556548 POTEFA5A3E0 1075 aa20.48■□□□□ 0.87
SDR39U1-220ENST00000556548 USP27XA6NNY8 438 aa20.48■□□□□ 0.87
SDR39U1-220ENST00000556548 MEIS1O00470 390 aa20.48■□□□□ 0.87
SDR39U1-220ENST00000556548 NFIBO00712 420 aa20.48■□□□□ 0.87
SDR39U1-220ENST00000556548 ICAM1P05362 532 aa20.48■□□□□ 0.87
SDR39U1-220ENST00000556548 POTEIP0CG38 1075 aa20.48■□□□□ 0.87
SDR39U1-220ENST00000556548 CIITAP33076 1130 aa20.48■□□□□ 0.87
SDR39U1-220ENST00000556548 SPIRE1Q08AE8 756 aa20.48■□□□□ 0.87
SDR39U1-220ENST00000556548 POTEGQ6S5H5 508 aa20.48■□□□□ 0.87
SDR39U1-220ENST00000556548 POTEEQ6S8J3 1075 aa20.48■□□□□ 0.87
SDR39U1-220ENST00000556548 VPS16Q9H269 839 aa20.48■□□□□ 0.87
SDR39U1-220ENST00000556548 RPAP3Q9H6T3 665 aaPredicted RBP20.48■□□□□ 0.87
SDR39U1-220ENST00000556548 TRMT1Q9NXH9 659 aaKnown RBP20.48■□□□□ 0.87
SDR39U1-220ENST00000556548 ABCB11O95342 1321 aa20.47■□□□□ 0.87
SDR39U1-220ENST00000556548 PSMA7O14818 248 aa20.47■□□□□ 0.87
SDR39U1-220ENST00000556548 ALAS1P13196 640 aa20.47■□□□□ 0.87
SDR39U1-220ENST00000556548 TERF1P54274 439 aa20.47■□□□□ 0.87
SDR39U1-220ENST00000556548 RAD51AP2Q09MP3 1159 aa20.47■□□□□ 0.87
SDR39U1-220ENST00000556548 KRT31Q15323 416 aa20.47■□□□□ 0.87
SDR39U1-220ENST00000556548 SPECC1LQ69YQ0 1117 aa20.47■□□□□ 0.87
SDR39U1-220ENST00000556548 SCYL3Q8IZE3 742 aa20.47■□□□□ 0.87
SDR39U1-220ENST00000556548 KIAA0895Q8NCT3 520 aa20.47■□□□□ 0.87
SDR39U1-220ENST00000556548 TRIM47Q96LD4 638 aa20.47■□□□□ 0.87
SDR39U1-220ENST00000556548 WDR18Q9BV38 432 aa20.47■□□□□ 0.87
SDR39U1-220ENST00000556548 PICK1Q9NRD5 415 aa20.47■□□□□ 0.87
SDR39U1-220ENST00000556548 TAB2Q9NYJ8 693 aa20.47■□□□□ 0.87
SDR39U1-220ENST00000556548 ADD3Q9UEY8 706 aaKnown RBP20.47■□□□□ 0.87
SDR39U1-220ENST00000556548 KCNJ18B7U540 433 aa20.47■□□□□ 0.87
SDR39U1-220ENST00000556548 CYP3A4P08684 503 aa20.47■□□□□ 0.87
SDR39U1-220ENST00000556548 KCNJ12Q14500 433 aa20.47■□□□□ 0.87
SDR39U1-220ENST00000556548 ZHX2Q9Y6X8 837 aa20.47■□□□□ 0.87
SDR39U1-220ENST00000556548 IGLV3-22A0A075B6J6 115 aa20.46■□□□□ 0.87
SDR39U1-220ENST00000556548 NPHP3-ACAD11A0A0J9YXS1 232 aa20.46■□□□□ 0.87
SDR39U1-220ENST00000556548 PTPRAP18433 802 aa20.46■□□□□ 0.87
SDR39U1-220ENST00000556548 ADKP55263 362 aaKnown RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms