RNA–Protein interactions for RNA: ENST00000556478.2

ATL1-209, Transcript of atlastin GTPase 1, humanhuman

TSL 2

Gene ATL1, Length 644 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-209ENST00000556478 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.55■■□□□ 1.36
ATL1-209ENST00000556478 EIF3JO75822 258 aaKnown RBP23.55■■□□□ 1.36
ATL1-209ENST00000556478 RXRAP19793 462 aa23.55■■□□□ 1.36
ATL1-209ENST00000556478 ARHGAP1Q07960 439 aa23.55■■□□□ 1.36
ATL1-209ENST00000556478 IL31RAQ8NI17 732 aa23.55■■□□□ 1.36
ATL1-209ENST00000556478 CTCFLQ8NI51 663 aaPredicted RBP23.55■■□□□ 1.36
ATL1-209ENST00000556478 CDX2Q99626 313 aaPredicted RBP23.55■■□□□ 1.36
ATL1-209ENST00000556478 SEZ6LQ9BYH1 1024 aa23.55■■□□□ 1.36
ATL1-209ENST00000556478 MRVI1Q9Y6F6 885 aa23.55■■□□□ 1.36
ATL1-209ENST00000556478 GCOM1H8Y6P7 765 aaPredicted RBP23.54■■□□□ 1.36
ATL1-209ENST00000556478 KPNA6O60684 536 aa23.54■■□□□ 1.36
ATL1-209ENST00000556478 MMP3P08254 477 aa23.54■■□□□ 1.36
ATL1-209ENST00000556478 POLR2MP0CAP2 368 aa23.54■■□□□ 1.36
ATL1-209ENST00000556478 MCM5P33992 734 aa23.54■■□□□ 1.36
ATL1-209ENST00000556478 PSRC1Q6PGN9 363 aaPredicted RBP23.54■■□□□ 1.36
ATL1-209ENST00000556478 OTOP2Q7RTS6 562 aa23.54■■□□□ 1.36
ATL1-209ENST00000556478 CMTR1Q8N1G2 835 aaKnown RBP23.54■■□□□ 1.36
ATL1-209ENST00000556478 MYLIPQ8WY64 445 aa23.54■■□□□ 1.36
ATL1-209ENST00000556478 PDCD2LQ9BRP1 358 aa23.54■■□□□ 1.36
ATL1-209ENST00000556478 DDX41Q9UJV9 622 aaKnown RBP23.54■■□□□ 1.36
ATL1-209ENST00000556478 EYSQ5T1H1 3165 aa23.54■■□□□ 1.36
ATL1-209ENST00000556478 CCDC69A6NI79 296 aa23.53■■□□□ 1.36
ATL1-209ENST00000556478 FGBP02675 491 aa23.53■■□□□ 1.36
ATL1-209ENST00000556478 PGM5Q15124 567 aa23.53■■□□□ 1.36
ATL1-209ENST00000556478 CDH23Q9H251 3354 aa23.52■■□□□ 1.36
ATL1-209ENST00000556478 SH2B2O14492 632 aaPredicted RBP23.52■■□□□ 1.36
ATL1-209ENST00000556478 PLEKHA8P1O95397 391 aa23.52■■□□□ 1.36
ATL1-209ENST00000556478 SUPT20HL2P0C7V6 817 aa23.52■■□□□ 1.36
ATL1-209ENST00000556478 DNAJB2P25686 324 aa23.52■■□□□ 1.36
ATL1-209ENST00000556478 PBX2P40425 430 aa23.52■■□□□ 1.36
ATL1-209ENST00000556478 DEFB128Q7Z7B8 93 aa23.52■■□□□ 1.36
ATL1-209ENST00000556478 CXXC1Q9P0U4 656 aaPredicted RBP23.52■■□□□ 1.36
ATL1-209ENST00000556478 GHRHRQ02643 423 aa23.51■■□□□ 1.35
ATL1-209ENST00000556478 TRAF1Q13077 416 aa23.51■■□□□ 1.35
ATL1-209ENST00000556478 NECTIN1Q15223 517 aa23.51■■□□□ 1.35
ATL1-209ENST00000556478 BMP2KLQ5H9B9 411 aa23.51■■□□□ 1.35
ATL1-209ENST00000556478 DHX37Q8IY37 1157 aaKnown RBP23.51■■□□□ 1.35
ATL1-209ENST00000556478 GPKOWQ92917 476 aaPredicted RBP eCLIP23.51■■□□□ 1.35
ATL1-209ENST00000556478 ALG1Q9BT22 464 aa23.51■■□□□ 1.35
ATL1-209ENST00000556478 MAP3K20Q9NYL2 800 aaKnown RBP23.51■■□□□ 1.35
ATL1-209ENST00000556478 NOD1Q9Y239 953 aa23.51■■□□□ 1.35
ATL1-209ENST00000556478 PTPRSQ13332 1948 aa23.51■■□□□ 1.35
ATL1-209ENST00000556478 RGS20O76081 388 aa23.5■■□□□ 1.35
ATL1-209ENST00000556478 DDAH1O94760 285 aa23.5■■□□□ 1.35
ATL1-209ENST00000556478 CASTP20810 708 aaKnown RBP23.5■■□□□ 1.35
ATL1-209ENST00000556478 KIF5BP33176 963 aa23.5■■□□□ 1.35
ATL1-209ENST00000556478 NFRKBQ6P4R8 1299 aa23.5■■□□□ 1.35
ATL1-209ENST00000556478 CCDC82Q8N4S0 544 aa23.5■■□□□ 1.35
ATL1-209ENST00000556478 RRP36Q96EU6 259 aaKnown RBP23.5■■□□□ 1.35
ATL1-209ENST00000556478 TMEM87BQ96K49 555 aa23.5■■□□□ 1.35
ATL1-209ENST00000556478 hCG_1642624A0A1W2PR95 340 aa23.49■■□□□ 1.35
ATL1-209ENST00000556478 ZBBXA8MT70 800 aa23.49■■□□□ 1.35
ATL1-209ENST00000556478 ZNF286BP0CG31 522 aa23.49■■□□□ 1.35
ATL1-209ENST00000556478 CCND2P30279 289 aa23.49■■□□□ 1.35
ATL1-209ENST00000556478 DGKDQ16760 1214 aa23.49■■□□□ 1.35
ATL1-209ENST00000556478 RASIP1Q5U651 963 aa23.49■■□□□ 1.35
ATL1-209ENST00000556478 VSIG10LQ86VR7 867 aa23.49■■□□□ 1.35
ATL1-209ENST00000556478 SRBD1Q8N5C6 995 aaKnown RBP23.49■■□□□ 1.35
ATL1-209ENST00000556478 HERVK_113Q902F9 699 aa23.49■■□□□ 1.35
ATL1-209ENST00000556478 TIFAQ96CG3 184 aa23.49■■□□□ 1.35
ATL1-209ENST00000556478 GGPS1O95749 300 aa23.48■■□□□ 1.35
ATL1-209ENST00000556478 LAMC2Q13753 1193 aa23.48■■□□□ 1.35
ATL1-209ENST00000556478 PTGISQ16647 500 aa23.48■■□□□ 1.35
ATL1-209ENST00000556478 GDF6Q6KF10 455 aaPredicted RBP23.48■■□□□ 1.35
ATL1-209ENST00000556478 RPUSD2Q8IZ73 545 aaKnown RBP23.48■■□□□ 1.35
ATL1-209ENST00000556478 KAT2BQ92831 832 aa23.48■■□□□ 1.35
ATL1-209ENST00000556478 TCEANC2Q96MN5 208 aa23.48■■□□□ 1.35
ATL1-209ENST00000556478 SPZ1Q9BXG8 430 aa23.48■■□□□ 1.35
ATL1-209ENST00000556478 PBX4Q9BYU1 374 aa23.48■■□□□ 1.35
ATL1-209ENST00000556478 SEC63Q9UGP8 760 aaKnown RBP23.48■■□□□ 1.35
ATL1-209ENST00000556478 UNC80Q8N2C7 3258 aa23.47■■□□□ 1.35
ATL1-209ENST00000556478 RBAK-RBAKDNI3L0D1 243 aa23.47■■□□□ 1.35
ATL1-209ENST00000556478 SP2Q02086 613 aa23.47■■□□□ 1.35
ATL1-209ENST00000556478 GRIN2CQ14957 1233 aa23.47■■□□□ 1.35
ATL1-209ENST00000556478 USP17L6PQ6QN14 398 aa23.47■■□□□ 1.35
ATL1-209ENST00000556478 TMTC2Q8N394 836 aa23.47■■□□□ 1.35
ATL1-209ENST00000556478 SAMD3Q8N6K7 520 aa23.47■■□□□ 1.35
ATL1-209ENST00000556478 RETREG2Q8NC44 543 aa23.47■■□□□ 1.35
ATL1-209ENST00000556478 SMARCC2Q8TAQ2 1214 aa23.47■■□□□ 1.35
ATL1-209ENST00000556478 MAP3K14Q99558 947 aa23.47■■□□□ 1.35
ATL1-209ENST00000556478 MTIF3Q9H2K0 278 aaKnown RBP23.47■■□□□ 1.35
ATL1-209ENST00000556478 BCAS3Q9H6U6 928 aa23.47■■□□□ 1.35
ATL1-209ENST00000556478 RTEL1Q9NZ71 1219 aa23.47■■□□□ 1.35
ATL1-209ENST00000556478 A0A0C4DFX4 3053 aa23.46■■□□□ 1.35
ATL1-209ENST00000556478 PRUNE2Q8WUY3 3088 aa23.46■■□□□ 1.35
ATL1-209ENST00000556478 FOSL2P15408 326 aa23.46■■□□□ 1.35
ATL1-209ENST00000556478 PSEN2P49810 448 aa23.46■■□□□ 1.35
ATL1-209ENST00000556478 PTPN11Q06124 597 aaPredicted RBP23.46■■□□□ 1.35
ATL1-209ENST00000556478 VWCEQ96DN2 955 aa23.46■■□□□ 1.35
ATL1-209ENST00000556478 SPATA33Q96N06 139 aa23.46■■□□□ 1.35
ATL1-209ENST00000556478 MTA3Q9BTC8 594 aa23.46■■□□□ 1.35
ATL1-209ENST00000556478 ZNF576Q9H609 170 aa23.46■■□□□ 1.35
ATL1-209ENST00000556478 HDAC6Q9UBN7 1215 aa23.46■■□□□ 1.35
ATL1-209ENST00000556478 SLC12A7Q9Y666 1083 aa23.46■■□□□ 1.35
ATL1-209ENST00000556478 CDC45O75419 566 aa23.45■■□□□ 1.34
ATL1-209ENST00000556478 UBA1P22314 1058 aaKnown RBP23.45■■□□□ 1.34
ATL1-209ENST00000556478 LIFRP42702 1097 aa23.45■■□□□ 1.34
ATL1-209ENST00000556478 GNAQP50148 359 aa23.45■■□□□ 1.34
ATL1-209ENST00000556478 RABGGTBP53611 331 aa23.45■■□□□ 1.34
ATL1-209ENST00000556478 HSDL1Q3SXM5 330 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms