RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 CTAGE1Q96RT6 745 aa15.5■□□□□ 0.07
TGFB3-204ENST00000556285 RMDN3Q96TC7 470 aa15.5■□□□□ 0.07
TGFB3-204ENST00000556285 CERS4Q9HA82 394 aa15.5■□□□□ 0.07
TGFB3-204ENST00000556285 SUPT16HQ9Y5B9 1047 aaKnown RBP15.5■□□□□ 0.07
TGFB3-204ENST00000556285 SLC4A7Q9Y6M7 1214 aa15.5■□□□□ 0.07
TGFB3-204ENST00000556285 BAZ2BQ9UIF8 2168 aaKnown RBP15.49■□□□□ 0.07
TGFB3-204ENST00000556285 RAD50Q92878 1312 aa15.49■□□□□ 0.07
TGFB3-204ENST00000556285 B4DLN1 442 aa15.49■□□□□ 0.07
TGFB3-204ENST00000556285 KPNA6O60684 536 aa15.49■□□□□ 0.07
TGFB3-204ENST00000556285 CFBP00751 764 aa15.49■□□□□ 0.07
TGFB3-204ENST00000556285 MMP3P08254 477 aa15.49■□□□□ 0.07
TGFB3-204ENST00000556285 MRPL12P52815 198 aaKnown RBP15.49■□□□□ 0.07
TGFB3-204ENST00000556285 IRX6P78412 446 aaPredicted RBP15.49■□□□□ 0.07
TGFB3-204ENST00000556285 TFF2Q03403 129 aa15.49■□□□□ 0.07
TGFB3-204ENST00000556285 GPNMBQ14956 572 aa15.49■□□□□ 0.07
TGFB3-204ENST00000556285 TCTN1Q2MV58 587 aa15.49■□□□□ 0.07
TGFB3-204ENST00000556285 BRDTQ58F21 947 aaPredicted RBP15.49■□□□□ 0.07
TGFB3-204ENST00000556285 IFIT1BQ5T764 474 aaKnown RBP15.49■□□□□ 0.07
TGFB3-204ENST00000556285 MCF2L2Q86YR7 1114 aa15.49■□□□□ 0.07
TGFB3-204ENST00000556285 KAT2BQ92831 832 aa15.49■□□□□ 0.07
TGFB3-204ENST00000556285 ASB2Q96Q27 587 aa15.49■□□□□ 0.07
TGFB3-204ENST00000556285 MTIF3Q9H2K0 278 aaKnown RBP15.49■□□□□ 0.07
TGFB3-204ENST00000556285 CNNM2Q9H8M5 875 aa15.49■□□□□ 0.07
TGFB3-204ENST00000556285 THEGQ9P2T0 379 aa15.49■□□□□ 0.07
TGFB3-204ENST00000556285 MAD2L2Q9UI95 211 aa15.49■□□□□ 0.07
TGFB3-204ENST00000556285 MRPL11Q9Y3B7 192 aaKnown RBP15.49■□□□□ 0.07
TGFB3-204ENST00000556285 KLRF2D3W0D1 207 aa15.48■□□□□ 0.07
TGFB3-204ENST00000556285 TNFRSF10AO00220 468 aa15.48■□□□□ 0.07
TGFB3-204ENST00000556285 GH1P01241 217 aa15.48■□□□□ 0.07
TGFB3-204ENST00000556285 IQCF3P0C7M6 154 aa15.48■□□□□ 0.07
TGFB3-204ENST00000556285 NT5C2P49902 561 aa15.48■□□□□ 0.07
TGFB3-204ENST00000556285 STXBP2Q15833 593 aa15.48■□□□□ 0.07
TGFB3-204ENST00000556285 ARHGEF16Q5VV41 709 aa15.48■□□□□ 0.07
TGFB3-204ENST00000556285 PPP2R2DQ66LE6 453 aa15.48■□□□□ 0.07
TGFB3-204ENST00000556285 TMCO2Q7Z6W1 182 aaPredicted RBP15.48■□□□□ 0.07
TGFB3-204ENST00000556285 SYMPKQ92797 1274 aaKnown RBP15.48■□□□□ 0.07
TGFB3-204ENST00000556285 MTMR8Q96EF0 704 aa15.48■□□□□ 0.07
TGFB3-204ENST00000556285 ZFP91Q96JP5 570 aaPredicted RBP15.48■□□□□ 0.07
TGFB3-204ENST00000556285 SLC28A3Q9HAS3 691 aa15.48■□□□□ 0.07
TGFB3-204ENST00000556285 PXMP2Q9NR77 195 aa15.48■□□□□ 0.07
TGFB3-204ENST00000556285 ATG2AQ2TAZ0 1938 aa15.47■□□□□ 0.07
TGFB3-204ENST00000556285 PALM3A6NDB9 673 aaPredicted RBP15.47■□□□□ 0.07
TGFB3-204ENST00000556285 SORBS3O60504 671 aa15.47■□□□□ 0.07
TGFB3-204ENST00000556285 CA3P07451 260 aa15.47■□□□□ 0.07
TGFB3-204ENST00000556285 NR3C2P08235 984 aa15.47■□□□□ 0.07
TGFB3-204ENST00000556285 CYP21A2P08686 494 aa15.47■□□□□ 0.07
TGFB3-204ENST00000556285 ATP2A2P16615 1042 aaKnown RBP15.47■□□□□ 0.07
TGFB3-204ENST00000556285 CHMLP26374 656 aa15.47■□□□□ 0.07
TGFB3-204ENST00000556285 HOXA13P31271 388 aaPredicted RBP15.47■□□□□ 0.07
TGFB3-204ENST00000556285 HSD17B4P51659 736 aa15.47■□□□□ 0.07
TGFB3-204ENST00000556285 GDF6Q6KF10 455 aaPredicted RBP15.47■□□□□ 0.07
TGFB3-204ENST00000556285 MICALL1Q8N3F8 863 aa15.47■□□□□ 0.07
TGFB3-204ENST00000556285 IL31RAQ8NI17 732 aa15.47■□□□□ 0.07
TGFB3-204ENST00000556285 ADAMTS19Q8TE59 1207 aa15.47■□□□□ 0.07
TGFB3-204ENST00000556285 IWS1Q96ST2 819 aa15.47■□□□□ 0.07
TGFB3-204ENST00000556285 AMNQ9BXJ7 453 aa15.47■□□□□ 0.07
TGFB3-204ENST00000556285 MAF1Q9H063 256 aa15.47■□□□□ 0.07
TGFB3-204ENST00000556285 DDX41Q9UJV9 622 aaKnown RBP15.47■□□□□ 0.07
TGFB3-204ENST00000556285 SIP14410 1827 aa15.47■□□□□ 0.07
TGFB3-204ENST00000556285 MICAL3Q7RTP6 2002 aa15.46■□□□□ 0.07
TGFB3-204ENST00000556285 RGS20O76081 388 aa15.46■□□□□ 0.07
TGFB3-204ENST00000556285 PTPN11Q06124 597 aaPredicted RBP15.46■□□□□ 0.07
TGFB3-204ENST00000556285 PTGISQ16647 500 aa15.46■□□□□ 0.07
TGFB3-204ENST00000556285 STOX1Q6ZVD7 989 aa15.46■□□□□ 0.07
TGFB3-204ENST00000556285 RETREG2Q8NC44 543 aa15.46■□□□□ 0.07
TGFB3-204ENST00000556285 ATXN2LQ8WWM7 1075 aaKnown RBP15.46■□□□□ 0.07
TGFB3-204ENST00000556285 DHX38Q92620 1227 aaKnown RBP15.46■□□□□ 0.07
TGFB3-204ENST00000556285 PCDHA11Q9Y5I1 949 aa15.46■□□□□ 0.07
TGFB3-204ENST00000556285 PITPNM1O00562 1244 aa15.45■□□□□ 0.06
TGFB3-204ENST00000556285 ZBTB5O15062 677 aa15.45■□□□□ 0.06
TGFB3-204ENST00000556285 CYTH3O43739 400 aa15.45■□□□□ 0.06
TGFB3-204ENST00000556285 EIF3JO75822 258 aaKnown RBP15.45■□□□□ 0.06
TGFB3-204ENST00000556285 PFKMP08237 780 aa15.45■□□□□ 0.06
TGFB3-204ENST00000556285 ZNF286BP0CG31 522 aa15.45■□□□□ 0.06
TGFB3-204ENST00000556285 MYCLP12524 364 aaPredicted RBP15.45■□□□□ 0.06
TGFB3-204ENST00000556285 KCNQ1P51787 676 aa15.45■□□□□ 0.06
TGFB3-204ENST00000556285 GHRHRQ02643 423 aa15.45■□□□□ 0.06
TGFB3-204ENST00000556285 GRM4Q14833 912 aa15.45■□□□□ 0.06
TGFB3-204ENST00000556285 HOMER1Q86YM7 354 aa15.45■□□□□ 0.06
TGFB3-204ENST00000556285 GPKOWQ92917 476 aaPredicted RBP eCLIP15.45■□□□□ 0.06
TGFB3-204ENST00000556285 PIGSQ96S52 555 aa15.45■□□□□ 0.06
TGFB3-204ENST00000556285 PDCD2LQ9BRP1 358 aa15.45■□□□□ 0.06
TGFB3-204ENST00000556285 ALG1Q9BT22 464 aa15.45■□□□□ 0.06
TGFB3-204ENST00000556285 FTOQ9C0B1 505 aaKnown RBP eCLIP15.45■□□□□ 0.06
TGFB3-204ENST00000556285 NOD1Q9Y239 953 aa15.45■□□□□ 0.06
TGFB3-204ENST00000556285 PCDHA1Q9Y5I3 950 aa15.45■□□□□ 0.06
TGFB3-204ENST00000556285 MRVI1Q9Y6F6 885 aa15.45■□□□□ 0.06
TGFB3-204ENST00000556285 LCHNA4D1U4 455 aa15.44■□□□□ 0.06
TGFB3-204ENST00000556285 IFIT3O14879 490 aaKnown RBP15.44■□□□□ 0.06
TGFB3-204ENST00000556285 CASTP20810 708 aaKnown RBP15.44■□□□□ 0.06
TGFB3-204ENST00000556285 COL9A1P20849 921 aa15.44■□□□□ 0.06
TGFB3-204ENST00000556285 ANTXR2P58335 489 aa15.44■□□□□ 0.06
TGFB3-204ENST00000556285 ZNF200P98182 395 aaPredicted RBP15.44■□□□□ 0.06
TGFB3-204ENST00000556285 SP2Q02086 613 aa15.44■□□□□ 0.06
TGFB3-204ENST00000556285 HIC1Q14526 733 aa15.44■□□□□ 0.06
TGFB3-204ENST00000556285 SESTD1Q86VW0 696 aa15.44■□□□□ 0.06
TGFB3-204ENST00000556285 WNT8BQ93098 351 aa15.44■□□□□ 0.06
TGFB3-204ENST00000556285 BCAS3Q9H6U6 928 aa15.44■□□□□ 0.06
TGFB3-204ENST00000556285 HDAC6Q9UBN7 1215 aa15.44■□□□□ 0.06
TGFB3-204ENST00000556285 MTCH2Q9Y6C9 303 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms