RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 DDX41Q9UJV9 622 aaKnown RBP16.81■□□□□ 0.28
CHMP4BP1-201ENST00000556017 RAD50Q92878 1312 aa16.8■□□□□ 0.28
CHMP4BP1-201ENST00000556017 LCHNA4D1U4 455 aa16.8■□□□□ 0.28
CHMP4BP1-201ENST00000556017 HAS3O00219 553 aa16.8■□□□□ 0.28
CHMP4BP1-201ENST00000556017 ZNF213O14771 459 aa16.8■□□□□ 0.28
CHMP4BP1-201ENST00000556017 PTGISQ16647 500 aa16.8■□□□□ 0.28
CHMP4BP1-201ENST00000556017 B4GALNT3Q6L9W6 998 aa16.8■□□□□ 0.28
CHMP4BP1-201ENST00000556017 SEPT14Q6ZU15 432 aa16.8■□□□□ 0.28
CHMP4BP1-201ENST00000556017 TMCO2Q7Z6W1 182 aaPredicted RBP16.8■□□□□ 0.28
CHMP4BP1-201ENST00000556017 EMID1Q96A84 441 aaPredicted RBP16.8■□□□□ 0.28
CHMP4BP1-201ENST00000556017 MTMR8Q96EF0 704 aa16.8■□□□□ 0.28
CHMP4BP1-201ENST00000556017 ZSCAN10Q96SZ4 725 aaPredicted RBP16.8■□□□□ 0.28
CHMP4BP1-201ENST00000556017 ZBTB47Q9UFB7 747 aaPredicted RBP16.8■□□□□ 0.28
CHMP4BP1-201ENST00000556017 NBNO60934 754 aa16.79■□□□□ 0.28
CHMP4BP1-201ENST00000556017 GH1P01241 217 aa16.79■□□□□ 0.28
CHMP4BP1-201ENST00000556017 CXCL10P02778 98 aa16.79■□□□□ 0.28
CHMP4BP1-201ENST00000556017 HOXD8P13378 290 aaPredicted RBP16.79■□□□□ 0.28
CHMP4BP1-201ENST00000556017 COL9A1P20849 921 aa16.79■□□□□ 0.28
CHMP4BP1-201ENST00000556017 KCNQ1P51787 676 aa16.79■□□□□ 0.28
CHMP4BP1-201ENST00000556017 NUCB1Q02818 461 aa16.79■□□□□ 0.28
CHMP4BP1-201ENST00000556017 TRIM71Q2Q1W2 868 aaKnown RBP16.79■□□□□ 0.28
CHMP4BP1-201ENST00000556017 ASPRV1Q53RT3 343 aa16.79■□□□□ 0.28
CHMP4BP1-201ENST00000556017 BRDTQ58F21 947 aaPredicted RBP16.79■□□□□ 0.28
CHMP4BP1-201ENST00000556017 CWC27Q6UX04 472 aaKnown RBP16.79■□□□□ 0.28
CHMP4BP1-201ENST00000556017 CHD1LQ86WJ1 897 aa16.79■□□□□ 0.28
CHMP4BP1-201ENST00000556017 NSUN6Q8TEA1 469 aaKnown RBP16.79■□□□□ 0.28
CHMP4BP1-201ENST00000556017 RMDN3Q96TC7 470 aa16.79■□□□□ 0.28
CHMP4BP1-201ENST00000556017 GTF2IRD1Q9UHL9 959 aa16.79■□□□□ 0.28
CHMP4BP1-201ENST00000556017 DOCK5Q9H7D0 1870 aa16.79■□□□□ 0.28
CHMP4BP1-201ENST00000556017 SIP14410 1827 aa16.79■□□□□ 0.28
CHMP4BP1-201ENST00000556017 MICAL3Q7RTP6 2002 aa16.79■□□□□ 0.28
CHMP4BP1-201ENST00000556017 ACTN1P12814 892 aa16.78■□□□□ 0.28
CHMP4BP1-201ENST00000556017 EIF2AK2P19525 551 aaKnown RBP16.78■□□□□ 0.28
CHMP4BP1-201ENST00000556017 HSD17B4P51659 736 aa16.78■□□□□ 0.28
CHMP4BP1-201ENST00000556017 WDR5P61964 334 aaKnown RBP16.78■□□□□ 0.28
CHMP4BP1-201ENST00000556017 DEFB103AP81534 67 aa16.78■□□□□ 0.28
CHMP4BP1-201ENST00000556017 BFSP2Q13515 415 aa16.78■□□□□ 0.28
CHMP4BP1-201ENST00000556017 MBTPS1Q14703 1052 aa16.78■□□□□ 0.28
CHMP4BP1-201ENST00000556017 SEC23AQ15436 765 aa16.78■□□□□ 0.28
CHMP4BP1-201ENST00000556017 STXBP2Q15833 593 aa16.78■□□□□ 0.28
CHMP4BP1-201ENST00000556017 CHST3Q7LGC8 479 aa16.78■□□□□ 0.28
CHMP4BP1-201ENST00000556017 MICALL1Q8N3F8 863 aa16.78■□□□□ 0.28
CHMP4BP1-201ENST00000556017 CAGE1Q8TC20 777 aa16.78■□□□□ 0.28
CHMP4BP1-201ENST00000556017 AFAP1L1Q8TED9 768 aa16.78■□□□□ 0.28
CHMP4BP1-201ENST00000556017 IWS1Q96ST2 819 aa16.78■□□□□ 0.28
CHMP4BP1-201ENST00000556017 MPHOSPH6Q99547 160 aaKnown RBP16.78■□□□□ 0.28
CHMP4BP1-201ENST00000556017 DSCC1Q9BVC3 393 aa16.78■□□□□ 0.28
CHMP4BP1-201ENST00000556017 PXMP2Q9NR77 195 aa16.78■□□□□ 0.28
CHMP4BP1-201ENST00000556017 HDAC6Q9UBN7 1215 aa16.78■□□□□ 0.28
CHMP4BP1-201ENST00000556017 B4DLN1 442 aa16.77■□□□□ 0.28
CHMP4BP1-201ENST00000556017 BAIAP3O94812 1187 aa16.77■□□□□ 0.28
CHMP4BP1-201ENST00000556017 F2P00734 622 aa16.77■□□□□ 0.28
CHMP4BP1-201ENST00000556017 NR3C2P08235 984 aa16.77■□□□□ 0.28
CHMP4BP1-201ENST00000556017 CKBP12277 381 aa16.77■□□□□ 0.28
CHMP4BP1-201ENST00000556017 NT5C2P49902 561 aa16.77■□□□□ 0.28
CHMP4BP1-201ENST00000556017 MRPL12P52815 198 aaKnown RBP16.77■□□□□ 0.28
CHMP4BP1-201ENST00000556017 ZNF200P98182 395 aaPredicted RBP16.77■□□□□ 0.28
CHMP4BP1-201ENST00000556017 GRB10Q13322 594 aa16.77■□□□□ 0.28
CHMP4BP1-201ENST00000556017 MKRN4PQ13434 485 aaPredicted RBP16.77■□□□□ 0.28
CHMP4BP1-201ENST00000556017 IQCA1Q86XH1 822 aa16.77■□□□□ 0.28
CHMP4BP1-201ENST00000556017 FBXO11Q86XK2 927 aa16.77■□□□□ 0.28
CHMP4BP1-201ENST00000556017 RETREG2Q8NC44 543 aa16.77■□□□□ 0.28
CHMP4BP1-201ENST00000556017 IL31RAQ8NI17 732 aa16.77■□□□□ 0.28
CHMP4BP1-201ENST00000556017 FTOQ9C0B1 505 aaKnown RBP eCLIP16.77■□□□□ 0.28
CHMP4BP1-201ENST00000556017 KAT14Q9H8E8 782 aa16.77■□□□□ 0.28
CHMP4BP1-201ENST00000556017 ZNF286BP0CG31 522 aa16.76■□□□□ 0.27
CHMP4BP1-201ENST00000556017 SELPP16109 830 aa16.76■□□□□ 0.27
CHMP4BP1-201ENST00000556017 PSEN2P49810 448 aa16.76■□□□□ 0.27
CHMP4BP1-201ENST00000556017 MFAP1P55081 439 aaKnown RBP16.76■□□□□ 0.27
CHMP4BP1-201ENST00000556017 CHMP4BP1P59074 171 aa16.76■□□□□ 0.27
CHMP4BP1-201ENST00000556017 SP2Q02086 613 aa16.76■□□□□ 0.27
CHMP4BP1-201ENST00000556017 STOX1Q6ZVD7 989 aa16.76■□□□□ 0.27
CHMP4BP1-201ENST00000556017 CYB5R4Q7L1T6 521 aa16.76■□□□□ 0.27
CHMP4BP1-201ENST00000556017 ARNTL2Q8WYA1 636 aa16.76■□□□□ 0.27
CHMP4BP1-201ENST00000556017 BCAS3Q9H6U6 928 aa16.76■□□□□ 0.27
CHMP4BP1-201ENST00000556017 VAT1LQ9HCJ6 419 aa16.76■□□□□ 0.27
CHMP4BP1-201ENST00000556017 MAD2L2Q9UI95 211 aa16.76■□□□□ 0.27
CHMP4BP1-201ENST00000556017 MRPL11Q9Y3B7 192 aaKnown RBP16.76■□□□□ 0.27
CHMP4BP1-201ENST00000556017 PALM3A6NDB9 673 aaPredicted RBP16.75■□□□□ 0.27
CHMP4BP1-201ENST00000556017 TLL1O43897 1013 aa16.75■□□□□ 0.27
CHMP4BP1-201ENST00000556017 EIF3JO75822 258 aaKnown RBP16.75■□□□□ 0.27
CHMP4BP1-201ENST00000556017 PARP1P09874 1014 aaKnown RBP16.75■□□□□ 0.27
CHMP4BP1-201ENST00000556017 CASTP20810 708 aaKnown RBP16.75■□□□□ 0.27
CHMP4BP1-201ENST00000556017 DGKDQ16760 1214 aa16.75■□□□□ 0.27
CHMP4BP1-201ENST00000556017 HSDL1Q3SXM5 330 aa16.75■□□□□ 0.27
CHMP4BP1-201ENST00000556017 CCDC178Q5BJE1 867 aa16.75■□□□□ 0.27
CHMP4BP1-201ENST00000556017 MYSM1Q5VVJ2 828 aa16.75■□□□□ 0.27
CHMP4BP1-201ENST00000556017 LRRC8DQ7L1W4 858 aa16.75■□□□□ 0.27
CHMP4BP1-201ENST00000556017 MCF2L2Q86YR7 1114 aa16.75■□□□□ 0.27
CHMP4BP1-201ENST00000556017 PPTC7Q8NI37 304 aa16.75■□□□□ 0.27
CHMP4BP1-201ENST00000556017 GPKOWQ92917 476 aaPredicted RBP eCLIP16.75■□□□□ 0.27
CHMP4BP1-201ENST00000556017 PDCD2LQ9BRP1 358 aa16.75■□□□□ 0.27
CHMP4BP1-201ENST00000556017 TAF6LQ9Y6J9 622 aa16.75■□□□□ 0.27
CHMP4BP1-201ENST00000556017 CFBP00751 764 aa16.74■□□□□ 0.27
CHMP4BP1-201ENST00000556017 HOXC8P31273 242 aa16.74■□□□□ 0.27
CHMP4BP1-201ENST00000556017 ZNF618Q5T7W0 954 aa16.74■□□□□ 0.27
CHMP4BP1-201ENST00000556017 ARHGEF16Q5VV41 709 aa16.74■□□□□ 0.27
CHMP4BP1-201ENST00000556017 CNKSR3Q6P9H4 555 aa16.74■□□□□ 0.27
CHMP4BP1-201ENST00000556017 C16orf70Q9BSU1 422 aa16.74■□□□□ 0.27
CHMP4BP1-201ENST00000556017 OSBPL7Q9BZF2 842 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms