RNA–Protein interactions for RNA: ENST00000555953.1

SCFD1-217, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 497 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-217ENST00000555953 NLRP10Q86W26 655 aa6.82□□□□□ -1.32
SCFD1-217ENST00000555953 SEC14L1Q92503 715 aa6.82□□□□□ -1.32
SCFD1-217ENST00000555953 TMEFF2Q9UIK5 374 aaPredicted RBP6.82□□□□□ -1.32
SCFD1-217ENST00000555953 PALD1Q9ULE6 856 aa6.82□□□□□ -1.32
SCFD1-217ENST00000555953 B2RBV5 119 aa6.81□□□□□ -1.32
SCFD1-217ENST00000555953 SLC6A11P48066 632 aa6.81□□□□□ -1.32
SCFD1-217ENST00000555953 RPL11P62913 178 aaKnown RBP6.81□□□□□ -1.32
SCFD1-217ENST00000555953 CD300LDQ6UXZ3 194 aa6.81□□□□□ -1.32
SCFD1-217ENST00000555953 STK32CQ86UX6 486 aa6.81□□□□□ -1.32
SCFD1-217ENST00000555953 Q8N1Y9 231 aa6.81□□□□□ -1.32
SCFD1-217ENST00000555953 TIMM13Q9Y5L4 95 aaPredicted RBP6.81□□□□□ -1.32
SCFD1-217ENST00000555953 MRVI1Q9Y6F6 885 aa6.81□□□□□ -1.32
SCFD1-217ENST00000555953 ITGAVP06756 1048 aa6.8□□□□□ -1.32
SCFD1-217ENST00000555953 RPL13P26373 211 aaKnown RBP6.8□□□□□ -1.32
SCFD1-217ENST00000555953 IQCEQ6IPM2 695 aa6.8□□□□□ -1.32
SCFD1-217ENST00000555953 ZNF227Q86WZ6 799 aa6.8□□□□□ -1.32
SCFD1-217ENST00000555953 RIOX2Q8IUF8 465 aa6.8□□□□□ -1.32
SCFD1-217ENST00000555953 FAM178BQ8IXR5 827 aa6.8□□□□□ -1.32
SCFD1-217ENST00000555953 KYQ8NBH2 561 aa6.8□□□□□ -1.32
SCFD1-217ENST00000555953 BORCS6Q96GS4 357 aa6.8□□□□□ -1.32
SCFD1-217ENST00000555953 PCDH18Q9HCL0 1135 aa6.8□□□□□ -1.32
SCFD1-217ENST00000555953 FBXL7Q9UJT9 491 aa6.8□□□□□ -1.32
SCFD1-217ENST00000555953 ITGB3P05106 788 aa6.79□□□□□ -1.32
SCFD1-217ENST00000555953 BCL6P41182 706 aa6.79□□□□□ -1.32
SCFD1-217ENST00000555953 ECI1P42126 302 aa6.79□□□□□ -1.32
SCFD1-217ENST00000555953 STAT5AP42229 794 aa6.79□□□□□ -1.32
SCFD1-217ENST00000555953 ITGA1P56199 1179 aa6.79□□□□□ -1.32
SCFD1-217ENST00000555953 SF1Q15637 639 aaKnown RBP6.79□□□□□ -1.32
SCFD1-217ENST00000555953 ZNF827Q17R98 1081 aa6.79□□□□□ -1.32
SCFD1-217ENST00000555953 RGL3Q3MIN7 710 aa6.79□□□□□ -1.32
SCFD1-217ENST00000555953 MROH9Q5TGP6 573 aa6.79□□□□□ -1.32
SCFD1-217ENST00000555953 LARP1BQ659C4 914 aaKnown RBP6.79□□□□□ -1.32
SCFD1-217ENST00000555953 E4F1Q66K89 784 aaPredicted RBP6.79□□□□□ -1.32
SCFD1-217ENST00000555953 CEP68Q76N32 757 aa6.79□□□□□ -1.32
SCFD1-217ENST00000555953 MILR1Q7Z6M3 343 aa6.79□□□□□ -1.32
SCFD1-217ENST00000555953 FAM126BQ8IXS8 530 aa6.79□□□□□ -1.32
SCFD1-217ENST00000555953 KREMEN2Q8NCW0 462 aa6.79□□□□□ -1.32
SCFD1-217ENST00000555953 DIO2Q92813 273 aa6.79□□□□□ -1.32
SCFD1-217ENST00000555953 RBM15Q96T37 977 aaKnown RBP eCLIP6.79□□□□□ -1.32
SCFD1-217ENST00000555953 ACTR10Q9NZ32 417 aa6.79□□□□□ -1.32
SCFD1-217ENST00000555953 X6R8D5 127 aa6.79□□□□□ -1.32
SCFD1-217ENST00000555953 SUSD5O60279 629 aa6.78□□□□□ -1.32
SCFD1-217ENST00000555953 SCG5P05408 212 aa6.78□□□□□ -1.32
SCFD1-217ENST00000555953 SNRPB2P08579 225 aaKnown RBP6.78□□□□□ -1.32
SCFD1-217ENST00000555953 HOXC12P31275 282 aa6.78□□□□□ -1.32
SCFD1-217ENST00000555953 KCNAB2Q13303 367 aa6.78□□□□□ -1.32
SCFD1-217ENST00000555953 PRSS53Q2L4Q9 553 aa6.78□□□□□ -1.32
SCFD1-217ENST00000555953 ZXDCQ2QGD7 858 aaPredicted RBP6.78□□□□□ -1.32
SCFD1-217ENST00000555953 SV2CQ496J9 727 aa6.78□□□□□ -1.32
SCFD1-217ENST00000555953 PRR31Q5SQ13 230 aa6.78□□□□□ -1.32
SCFD1-217ENST00000555953 ZC3H18Q86VM9 953 aaKnown RBP6.78□□□□□ -1.32
SCFD1-217ENST00000555953 TTLL6Q8N841 843 aa6.78□□□□□ -1.32
SCFD1-217ENST00000555953 TRMT2BQ96GJ1 504 aaKnown RBP6.78□□□□□ -1.32
SCFD1-217ENST00000555953 MEFVO15553 781 aaPredicted RBP6.77□□□□□ -1.33
SCFD1-217ENST00000555953 INSRRP14616 1297 aa6.77□□□□□ -1.33
SCFD1-217ENST00000555953 MAGEA10P43363 369 aaPredicted RBP6.77□□□□□ -1.33
SCFD1-217ENST00000555953 CR1LQ2VPA4 569 aa6.77□□□□□ -1.33
SCFD1-217ENST00000555953 FAM26FQ5R3K3 315 aa6.77□□□□□ -1.33
SCFD1-217ENST00000555953 MRM1Q6IN84 353 aaKnown RBP6.77□□□□□ -1.33
SCFD1-217ENST00000555953 RCBTB1Q8NDN9 531 aa6.77□□□□□ -1.33
SCFD1-217ENST00000555953 MICAL1Q8TDZ2 1067 aa6.77□□□□□ -1.33
SCFD1-217ENST00000555953 CAPN10Q9HC96 672 aa6.77□□□□□ -1.33
SCFD1-217ENST00000555953 LRP2BPQ9P2M1 347 aa6.77□□□□□ -1.33
SCFD1-217ENST00000555953 MYO1BO43795 1136 aa6.76□□□□□ -1.33
SCFD1-217ENST00000555953 LCP1P13796 627 aa6.76□□□□□ -1.33
SCFD1-217ENST00000555953 GTF2A2P52657 109 aa6.76□□□□□ -1.33
SCFD1-217ENST00000555953 TESK1Q15569 626 aa6.76□□□□□ -1.33
SCFD1-217ENST00000555953 TBC1D10BQ4KMP7 808 aaPredicted RBP6.76□□□□□ -1.33
SCFD1-217ENST00000555953 TNNI3KQ59H18 835 aa6.76□□□□□ -1.33
SCFD1-217ENST00000555953 ACBD5Q5T8D3 534 aaPredicted RBP6.76□□□□□ -1.33
SCFD1-217ENST00000555953 DENND5AQ6IQ26 1287 aa6.76□□□□□ -1.33
SCFD1-217ENST00000555953 TMEM169Q96HH4 297 aa6.76□□□□□ -1.33
SCFD1-217ENST00000555953 DDX3XO00571 662 aaKnown RBP eCLIP6.75□□□□□ -1.33
SCFD1-217ENST00000555953 DDAH1O94760 285 aa6.75□□□□□ -1.33
SCFD1-217ENST00000555953 PLATP00750 562 aa6.75□□□□□ -1.33
SCFD1-217ENST00000555953 SSBP05455 408 aaKnown RBP eCLIP6.75□□□□□ -1.33
SCFD1-217ENST00000555953 GFRA1P56159 465 aa6.75□□□□□ -1.33
SCFD1-217ENST00000555953 ADAM9Q13443 819 aa6.75□□□□□ -1.33
SCFD1-217ENST00000555953 PUM1Q14671 1186 aaKnown RBP eCLIP6.75□□□□□ -1.33
SCFD1-217ENST00000555953 MCTP2Q6DN12 878 aa6.75□□□□□ -1.33
SCFD1-217ENST00000555953 PPIL6Q8IXY8 311 aa6.75□□□□□ -1.33
SCFD1-217ENST00000555953 TXNDC5Q8NBS9 432 aaKnown RBP6.75□□□□□ -1.33
SCFD1-217ENST00000555953 GPR20Q99678 358 aa6.75□□□□□ -1.33
SCFD1-217ENST00000555953 SMPD4Q9NXE4 827 aa6.75□□□□□ -1.33
SCFD1-217ENST00000555953 PRKAG3Q9UGI9 489 aa6.75□□□□□ -1.33
SCFD1-217ENST00000555953 INVSQ9Y283 1065 aa6.75□□□□□ -1.33
SCFD1-217ENST00000555953 ZNF652Q9Y2D9 606 aa6.75□□□□□ -1.33
SCFD1-217ENST00000555953 MROH6A6NGR9 719 aa6.74□□□□□ -1.33
SCFD1-217ENST00000555953 CPP00450 1065 aa6.74□□□□□ -1.33
SCFD1-217ENST00000555953 LTBRP36941 435 aa6.74□□□□□ -1.33
SCFD1-217ENST00000555953 ETFBP38117 255 aa6.74□□□□□ -1.33
SCFD1-217ENST00000555953 KCNJ6P48051 423 aa6.74□□□□□ -1.33
SCFD1-217ENST00000555953 ADAM17P78536 824 aa6.74□□□□□ -1.33
SCFD1-217ENST00000555953 TMEM145Q8NBT3 493 aa6.74□□□□□ -1.33
SCFD1-217ENST00000555953 C1orf159Q96HA4 380 aa6.74□□□□□ -1.33
SCFD1-217ENST00000555953 CCDC140Q96MF4 163 aa6.74□□□□□ -1.33
SCFD1-217ENST00000555953 YIPF4Q9BSR8 244 aa6.74□□□□□ -1.33
SCFD1-217ENST00000555953 KRTAP3-1Q9BYR8 98 aa6.74□□□□□ -1.33
SCFD1-217ENST00000555953 MYRFQ9Y2G1 1151 aa6.74□□□□□ -1.33
SCFD1-217ENST00000555953 COA3Q9Y2R0 106 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms