RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 CRELD2Q6UXH1 353 aaPredicted RBP8.58□□□□□ -1.04
CHD8-209ENST00000555935 KRT28Q7Z3Y7 464 aa8.58□□□□□ -1.04
CHD8-209ENST00000555935 MAB21L3Q8N8X9 362 aa8.58□□□□□ -1.04
CHD8-209ENST00000555935 TATDN2Q93075 761 aa8.58□□□□□ -1.04
CHD8-209ENST00000555935 FAM212AQ96EL1 285 aa8.58□□□□□ -1.04
CHD8-209ENST00000555935 RSRC1Q96IZ7 334 aaKnown RBP8.58□□□□□ -1.04
CHD8-209ENST00000555935 INPP4AQ96PE3 977 aaPredicted RBP8.58□□□□□ -1.04
CHD8-209ENST00000555935 ORAI2Q96SN7 254 aa8.58□□□□□ -1.04
CHD8-209ENST00000555935 NDST4Q9H3R1 872 aa8.58□□□□□ -1.04
CHD8-209ENST00000555935 POLD4Q9HCU8 107 aa8.58□□□□□ -1.04
CHD8-209ENST00000555935 SALL4Q9UJQ4 1053 aa8.58□□□□□ -1.04
CHD8-209ENST00000555935 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.58□□□□□ -1.04
CHD8-209ENST00000555935 UBR2Q8IWV8 1755 aa8.58□□□□□ -1.04
CHD8-209ENST00000555935 ZSCAN5CA6NGD5 496 aaPredicted RBP8.57□□□□□ -1.04
CHD8-209ENST00000555935 LRRC53A6NM62 1247 aa8.57□□□□□ -1.04
CHD8-209ENST00000555935 H0YGN5 161 aa8.57□□□□□ -1.04
CHD8-209ENST00000555935 GSTA1P08263 222 aa8.57□□□□□ -1.04
CHD8-209ENST00000555935 HOXA7P31268 230 aaPredicted RBP8.57□□□□□ -1.04
CHD8-209ENST00000555935 GBP2P32456 591 aaPredicted RBP8.57□□□□□ -1.04
CHD8-209ENST00000555935 PRPHP41219 470 aa8.57□□□□□ -1.04
CHD8-209ENST00000555935 RASSF7Q02833 373 aa8.57□□□□□ -1.04
CHD8-209ENST00000555935 PDE4DQ08499 809 aa8.57□□□□□ -1.04
CHD8-209ENST00000555935 RASGRF1Q13972 1273 aa8.57□□□□□ -1.04
CHD8-209ENST00000555935 SLMAPQ14BN4 828 aa8.57□□□□□ -1.04
CHD8-209ENST00000555935 PPP2R5AQ15172 486 aa8.57□□□□□ -1.04
CHD8-209ENST00000555935 ZKSCAN8Q15776 578 aaPredicted RBP8.57□□□□□ -1.04
CHD8-209ENST00000555935 MAN2A1Q16706 1144 aa8.57□□□□□ -1.04
CHD8-209ENST00000555935 CNNM4Q6P4Q7 775 aa8.57□□□□□ -1.04
CHD8-209ENST00000555935 PDXDC1Q6P996 788 aa8.57□□□□□ -1.04
CHD8-209ENST00000555935 RRAGAQ7L523 313 aa8.57□□□□□ -1.04
CHD8-209ENST00000555935 CCT6BQ92526 530 aa8.57□□□□□ -1.04
CHD8-209ENST00000555935 SYN2Q92777 582 aaPredicted RBP8.57□□□□□ -1.04
CHD8-209ENST00000555935 CNOT10Q9H9A5 744 aaKnown RBP8.57□□□□□ -1.04
CHD8-209ENST00000555935 TMEM59LQ9UK28 342 aa8.57□□□□□ -1.04
CHD8-209ENST00000555935 PCDHGC5Q9Y5F6 944 aa8.57□□□□□ -1.04
CHD8-209ENST00000555935 NFS1Q9Y697 457 aa8.57□□□□□ -1.04
CHD8-209ENST00000555935 DOCK2Q92608 1830 aa8.57□□□□□ -1.04
CHD8-209ENST00000555935 RAD51CO43502 376 aa8.57□□□□□ -1.04
CHD8-209ENST00000555935 ORC4O43929 436 aa8.57□□□□□ -1.04
CHD8-209ENST00000555935 NEBLO76041 1014 aa8.57□□□□□ -1.04
CHD8-209ENST00000555935 SLC1A4P43007 532 aa8.57□□□□□ -1.04
CHD8-209ENST00000555935 ZNF844Q08AG5 666 aa8.57□□□□□ -1.04
CHD8-209ENST00000555935 NAB2Q15742 525 aa8.57□□□□□ -1.04
CHD8-209ENST00000555935 MEI1Q5TIA1 1274 aa8.57□□□□□ -1.04
CHD8-209ENST00000555935 MSL1Q68DK7 614 aa8.57□□□□□ -1.04
CHD8-209ENST00000555935 USP38Q8NB14 1042 aa8.57□□□□□ -1.04
CHD8-209ENST00000555935 CCHCR1Q8TD31 782 aa8.57□□□□□ -1.04
CHD8-209ENST00000555935 BAP1Q92560 729 aa8.57□□□□□ -1.04
CHD8-209ENST00000555935 HVCN1Q96D96 273 aa8.57□□□□□ -1.04
CHD8-209ENST00000555935 C7orf25Q9BPX7 421 aa8.57□□□□□ -1.04
CHD8-209ENST00000555935 SH3GLB2Q9NR46 395 aa8.57□□□□□ -1.04
CHD8-209ENST00000555935 FAM207AQ9NSI2 230 aaPredicted RBP8.57□□□□□ -1.04
CHD8-209ENST00000555935 BUB1O43683 1085 aa8.56□□□□□ -1.04
CHD8-209ENST00000555935 CTNNA1P35221 906 aaKnown RBP8.56□□□□□ -1.04
CHD8-209ENST00000555935 AMPD3Q01432 767 aa8.56□□□□□ -1.04
CHD8-209ENST00000555935 RIPK1Q13546 671 aa8.56□□□□□ -1.04
CHD8-209ENST00000555935 HLTFQ14527 1009 aaKnown RBP eCLIP8.56□□□□□ -1.04
CHD8-209ENST00000555935 QPCTQ16769 361 aa8.56□□□□□ -1.04
CHD8-209ENST00000555935 SLC9C1Q4G0N8 1177 aa8.56□□□□□ -1.04
CHD8-209ENST00000555935 CENPPQ6IPU0 288 aa8.56□□□□□ -1.04
CHD8-209ENST00000555935 TMED8Q6PL24 325 aaPredicted RBP8.56□□□□□ -1.04
CHD8-209ENST00000555935 BLIDQ8IZY5 108 aa8.56□□□□□ -1.04
CHD8-209ENST00000555935 SRBD1Q8N5C6 995 aaKnown RBP8.56□□□□□ -1.04
CHD8-209ENST00000555935 CENPTQ96BT3 561 aa8.56□□□□□ -1.04
CHD8-209ENST00000555935 RBM33Q96EV2 1170 aaKnown RBP8.56□□□□□ -1.04
CHD8-209ENST00000555935 AK8Q96MA6 479 aa8.56□□□□□ -1.04
CHD8-209ENST00000555935 TRIM9Q9C026 710 aa8.56□□□□□ -1.04
CHD8-209ENST00000555935 MMRN2Q9H8L6 949 aa8.56□□□□□ -1.04
CHD8-209ENST00000555935 ARAP2Q8WZ64 1704 aa8.56□□□□□ -1.04
CHD8-209ENST00000555935 BCORQ6W2J9 1755 aa8.56□□□□□ -1.04
CHD8-209ENST00000555935 TNS2Q63HR2 1409 aa8.56□□□□□ -1.04
CHD8-209ENST00000555935 MYH2Q9UKX2 1941 aa8.56□□□□□ -1.04
CHD8-209ENST00000555935 ALS2Q96Q42 1657 aa8.56□□□□□ -1.04
CHD8-209ENST00000555935 MINDY4BA8MYZ0 360 aa8.56□□□□□ -1.04
CHD8-209ENST00000555935 BHMG1C9JSJ3 638 aaPredicted RBP8.56□□□□□ -1.04
CHD8-209ENST00000555935 EPHB6O15197 1021 aa8.56□□□□□ -1.04
CHD8-209ENST00000555935 PALMO75781 387 aa8.56□□□□□ -1.04
CHD8-209ENST00000555935 ATP6V1G2O95670 118 aa8.56□□□□□ -1.04
CHD8-209ENST00000555935 SSBP05455 408 aaKnown RBP eCLIP8.56□□□□□ -1.04
CHD8-209ENST00000555935 FGRP09769 529 aa8.56□□□□□ -1.04
CHD8-209ENST00000555935 PAX7P23759 505 aa8.56□□□□□ -1.04
CHD8-209ENST00000555935 ELF3P78545 371 aaPredicted RBP8.56□□□□□ -1.04
CHD8-209ENST00000555935 GFPT1Q06210 699 aaPredicted RBP8.56□□□□□ -1.04
CHD8-209ENST00000555935 BYSLQ13895 437 aaKnown RBP8.56□□□□□ -1.04
CHD8-209ENST00000555935 SPRED3Q2MJR0 410 aa8.56□□□□□ -1.04
CHD8-209ENST00000555935 CCDC178Q5BJE1 867 aa8.56□□□□□ -1.04
CHD8-209ENST00000555935 ODF2Q5BJF6 829 aa8.56□□□□□ -1.04
CHD8-209ENST00000555935 CACNA2D4Q7Z3S7 1137 aa8.56□□□□□ -1.04
CHD8-209ENST00000555935 CPLX4Q7Z7G2 160 aa8.56□□□□□ -1.04
CHD8-209ENST00000555935 ANKRD13CQ8N6S4 541 aa8.56□□□□□ -1.04
CHD8-209ENST00000555935 RAPGEF5Q92565 580 aa8.56□□□□□ -1.04
CHD8-209ENST00000555935 TAF4BQ92750 862 aa8.56□□□□□ -1.04
CHD8-209ENST00000555935 CUL5Q93034 780 aa8.56□□□□□ -1.04
CHD8-209ENST00000555935 CALR3Q96L12 384 aaKnown RBP8.56□□□□□ -1.04
CHD8-209ENST00000555935 NOD2Q9HC29 1040 aa8.56□□□□□ -1.04
CHD8-209ENST00000555935 LRP5O75197 1615 aa8.56□□□□□ -1.04
CHD8-209ENST00000555935 PLCH1Q4KWH8 1693 aa8.56□□□□□ -1.04
CHD8-209ENST00000555935 A0A0G2JS52 829 aa8.55□□□□□ -1.04
CHD8-209ENST00000555935 CFAP73A6NFT4 308 aa8.55□□□□□ -1.04
CHD8-209ENST00000555935 PPIP5K2O43314 1243 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms