RNA–Protein interactions for RNA: ENST00000555907.5

RAD51B-222, Transcript of RAD51 paralog B, human

TSL 5

Gene RAD51B, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51B-222	ENST00000555907	COL6A1	P12109	1028 aa		12.93	□□□□□ -0.34
RAD51B-222	ENST00000555907	USH1G	Q495M9	461 aa		12.93	□□□□□ -0.34
RAD51B-222	ENST00000555907	MFSD14C	Q5VZR4	134 aa		12.93	□□□□□ -0.34
RAD51B-222	ENST00000555907	SNRNP48	Q6IEG0	339 aa	Known RBP	12.93	□□□□□ -0.34
RAD51B-222	ENST00000555907	DPP9	Q86TI2	863 aa		12.93	□□□□□ -0.34
RAD51B-222	ENST00000555907	NCAPG2	Q86XI2	1143 aa		12.93	□□□□□ -0.34
RAD51B-222	ENST00000555907	NOSTRIN	Q8IVI9	506 aa		12.93	□□□□□ -0.34
RAD51B-222	ENST00000555907	NPLOC4	Q8TAT6	608 aa		12.93	□□□□□ -0.34
RAD51B-222	ENST00000555907	MROH8	Q9H579	483 aa		12.93	□□□□□ -0.34
RAD51B-222	ENST00000555907	FLRT1	Q9NZU1	646 aa		12.93	□□□□□ -0.34
RAD51B-222	ENST00000555907	FBXO40	Q9UH90	709 aa		12.93	□□□□□ -0.34
RAD51B-222	ENST00000555907	PCDHA6	Q9UN73	950 aa		12.93	□□□□□ -0.34
RAD51B-222	ENST00000555907	RIPK3	Q9Y572	518 aa		12.93	□□□□□ -0.34
RAD51B-222	ENST00000555907	PCDHA8	Q9Y5H6	950 aa		12.93	□□□□□ -0.34
RAD51B-222	ENST00000555907	KIF28P	B7ZC32	967 aa		12.92	□□□□□ -0.34
RAD51B-222	ENST00000555907	GCOM1	H8Y6P7	765 aa	Predicted RBP	12.92	□□□□□ -0.34
RAD51B-222	ENST00000555907	ADAMTS3	O15072	1205 aa		12.92	□□□□□ -0.34
RAD51B-222	ENST00000555907	POLR2M	P0CAP2	368 aa		12.92	□□□□□ -0.34
RAD51B-222	ENST00000555907	ALAS1	P13196	640 aa		12.92	□□□□□ -0.34
RAD51B-222	ENST00000555907	ADORA2A	P29274	412 aa		12.92	□□□□□ -0.34
RAD51B-222	ENST00000555907	TRAPPC10	P48553	1259 aa		12.92	□□□□□ -0.34
RAD51B-222	ENST00000555907	HSD17B4	P51659	736 aa		12.92	□□□□□ -0.34
RAD51B-222	ENST00000555907	FOSB	P53539	338 aa		12.92	□□□□□ -0.34
RAD51B-222	ENST00000555907	NR5A1	Q13285	461 aa		12.92	□□□□□ -0.34
RAD51B-222	ENST00000555907	AP3B2	Q13367	1082 aa		12.92	□□□□□ -0.34
RAD51B-222	ENST00000555907	LHX8	Q68G74	356 aa		12.92	□□□□□ -0.34
RAD51B-222	ENST00000555907	MCTP1	Q6DN14	999 aa		12.92	□□□□□ -0.34
RAD51B-222	ENST00000555907	KRT25	Q7Z3Z0	450 aa		12.92	□□□□□ -0.34
RAD51B-222	ENST00000555907	REXO1	Q8N1G1	1221 aa	Known RBP	12.92	□□□□□ -0.34
RAD51B-222	ENST00000555907	OXER1	Q8TDS5	423 aa		12.92	□□□□□ -0.34
RAD51B-222	ENST00000555907	PRDM5	Q9NQX1	630 aa	Predicted RBP	12.92	□□□□□ -0.34
RAD51B-222	ENST00000555907	ATP11B	Q9Y2G3	1177 aa		12.92	□□□□□ -0.34
RAD51B-222	ENST00000555907	SMCHD1	A6NHR9	2005 aa		12.91	□□□□□ -0.34
RAD51B-222	ENST00000555907	POTEB2	H3BUK9	544 aa		12.91	□□□□□ -0.34
RAD51B-222	ENST00000555907	ANO1	Q5XXA6	986 aa		12.91	□□□□□ -0.34
RAD51B-222	ENST00000555907	FERMT3	Q86UX7	667 aa		12.91	□□□□□ -0.34
RAD51B-222	ENST00000555907	MYLIP	Q8WY64	445 aa		12.91	□□□□□ -0.34
RAD51B-222	ENST00000555907	TNPO1	Q92973	898 aa	Known RBP	12.91	□□□□□ -0.34
RAD51B-222	ENST00000555907	ACAD9	Q9H845	621 aa		12.91	□□□□□ -0.34
RAD51B-222	ENST00000555907	RNF146	Q9NTX7	359 aa		12.91	□□□□□ -0.34
RAD51B-222	ENST00000555907	PRKAG2	Q9UGJ0	569 aa		12.91	□□□□□ -0.34
RAD51B-222	ENST00000555907	LTBP2	Q14767	1821 aa		12.9	□□□□□ -0.34
RAD51B-222	ENST00000555907	CCDC194	A0A1B0GVG4	234 aa		12.9	□□□□□ -0.34
RAD51B-222	ENST00000555907	COBL	O75128	1261 aa		12.9	□□□□□ -0.34
RAD51B-222	ENST00000555907	FCER1A	P12319	257 aa		12.9	□□□□□ -0.34
RAD51B-222	ENST00000555907	CYP2C19	P33261	490 aa		12.9	□□□□□ -0.34
RAD51B-222	ENST00000555907	RTP1	P59025	263 aa		12.9	□□□□□ -0.34
RAD51B-222	ENST00000555907	GNL2	Q13823	731 aa	Known RBP	12.9	□□□□□ -0.34
RAD51B-222	ENST00000555907	RILPL1	Q5EBL4	403 aa		12.9	□□□□□ -0.34
RAD51B-222	ENST00000555907	MUM1L1	Q5H9M0	696 aa		12.9	□□□□□ -0.34
RAD51B-222	ENST00000555907	MYSM1	Q5VVJ2	828 aa		12.9	□□□□□ -0.34
RAD51B-222	ENST00000555907	USP17L6P	Q6QN14	398 aa		12.9	□□□□□ -0.34
RAD51B-222	ENST00000555907	MAFA	Q8NHW3	353 aa	Predicted RBP	12.9	□□□□□ -0.34
RAD51B-222	ENST00000555907	TBC1D5	Q92609	795 aa		12.9	□□□□□ -0.34
RAD51B-222	ENST00000555907	CDX2	Q99626	313 aa	Predicted RBP	12.9	□□□□□ -0.34
RAD51B-222	ENST00000555907	SLC5A4	Q9NY91	659 aa		12.9	□□□□□ -0.34
RAD51B-222	ENST00000555907	UNC80	Q8N2C7	3258 aa		12.89	□□□□□ -0.35
RAD51B-222	ENST00000555907	DNAH12	Q6ZR08	3092 aa		12.89	□□□□□ -0.35
RAD51B-222	ENST00000555907	NFIB	O00712	420 aa		12.89	□□□□□ -0.35
RAD51B-222	ENST00000555907	CFB	P00751	764 aa		12.89	□□□□□ -0.35
RAD51B-222	ENST00000555907	USP11	P51784	963 aa		12.89	□□□□□ -0.35
RAD51B-222	ENST00000555907	NONO	Q15233	471 aa	Known RBP eCLIP	12.89	□□□□□ -0.35
RAD51B-222	ENST00000555907	SHH	Q15465	462 aa		12.89	□□□□□ -0.35
RAD51B-222	ENST00000555907	EARS2	Q5JPH6	523 aa	Known RBP	12.89	□□□□□ -0.35
RAD51B-222	ENST00000555907	C9orf50	Q5SZB4	431 aa		12.89	□□□□□ -0.35
RAD51B-222	ENST00000555907	GJC2	Q5T442	439 aa	Predicted RBP	12.89	□□□□□ -0.35
RAD51B-222	ENST00000555907	JAKMIP3	Q5VZ66	844 aa		12.89	□□□□□ -0.35
RAD51B-222	ENST00000555907	OLFML2B	Q68BL8	750 aa		12.89	□□□□□ -0.35
RAD51B-222	ENST00000555907	RNF207	Q6ZRF8	634 aa		12.89	□□□□□ -0.35
RAD51B-222	ENST00000555907	ABRA	Q8N0Z2	381 aa		12.89	□□□□□ -0.35
RAD51B-222	ENST00000555907	SYTL5	Q8TDW5	730 aa	Predicted RBP	12.89	□□□□□ -0.35
RAD51B-222	ENST00000555907	CRYGN	Q8WXF5	182 aa		12.89	□□□□□ -0.35
RAD51B-222	ENST00000555907	ZNF396	Q96N95	335 aa	Predicted RBP	12.89	□□□□□ -0.35
RAD51B-222	ENST00000555907	MMP19	Q99542	508 aa		12.89	□□□□□ -0.35
RAD51B-222	ENST00000555907	CYP39A1	Q9NYL5	469 aa		12.89	□□□□□ -0.35
RAD51B-222	ENST00000555907	CFAP45	Q9UL16	551 aa		12.89	□□□□□ -0.35
RAD51B-222	ENST00000555907	MORC2	Q9Y6X9	1032 aa	Predicted RBP	12.89	□□□□□ -0.35
RAD51B-222	ENST00000555907	SPDYE3	A6NKU9	549 aa		12.88	□□□□□ -0.35
RAD51B-222	ENST00000555907	IGHA2	P01877	340 aa		12.88	□□□□□ -0.35
RAD51B-222	ENST00000555907	CYP3A4	P08684	503 aa		12.88	□□□□□ -0.35
RAD51B-222	ENST00000555907	TAL1	P17542	331 aa	Predicted RBP	12.88	□□□□□ -0.35
RAD51B-222	ENST00000555907	TOB1	P50616	345 aa	Predicted RBP	12.88	□□□□□ -0.35
RAD51B-222	ENST00000555907	RPS6	P62753	249 aa	Known RBP	12.88	□□□□□ -0.35
RAD51B-222	ENST00000555907	ORC2	Q13416	577 aa	Predicted RBP	12.88	□□□□□ -0.35
RAD51B-222	ENST00000555907	BAAT	Q14032	418 aa	Predicted RBP	12.88	□□□□□ -0.35
RAD51B-222	ENST00000555907	UBE2S	Q16763	222 aa		12.88	□□□□□ -0.35
RAD51B-222	ENST00000555907	FOXD4L5	Q5VV16	416 aa	Predicted RBP	12.88	□□□□□ -0.35
RAD51B-222	ENST00000555907	FAM109B	Q6ICB4	259 aa	Predicted RBP	12.88	□□□□□ -0.35
RAD51B-222	ENST00000555907	PIK3AP1	Q6ZUJ8	805 aa		12.88	□□□□□ -0.35
RAD51B-222	ENST00000555907	TRPV1	Q8NER1	839 aa		12.88	□□□□□ -0.35
RAD51B-222	ENST00000555907	RASGRP4	Q8TDF6	673 aa		12.88	□□□□□ -0.35
RAD51B-222	ENST00000555907	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	12.88	□□□□□ -0.35
RAD51B-222	ENST00000555907	TMEM260	Q9NX78	707 aa		12.88	□□□□□ -0.35
RAD51B-222	ENST00000555907	RTEL1	Q9NZ71	1219 aa		12.88	□□□□□ -0.35
RAD51B-222	ENST00000555907	DDX20	Q9UHI6	824 aa	Known RBP	12.88	□□□□□ -0.35
RAD51B-222	ENST00000555907	NOL7	Q9UMY1	257 aa	Known RBP	12.88	□□□□□ -0.35
RAD51B-222	ENST00000555907	FRMPD4	Q14CM0	1322 aa		12.88	□□□□□ -0.35
RAD51B-222	ENST00000555907	DNAJC25-GNG10	A0A024R161	153 aa		12.87	□□□□□ -0.35
RAD51B-222	ENST00000555907	CYP3A7-CYP3A51P	A0A087WV96	503 aa		12.87	□□□□□ -0.35
RAD51B-222	ENST00000555907	LOC102724159	A0A0B4J2E5	919 aa		12.87	□□□□□ -0.35

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