RNA–Protein interactions for RNA: ENST00000555632.5

GABRB3-209, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-209ENST00000555632 POTECB2RU33 542 aa20.63■□□□□ 0.89
GABRB3-209ENST00000555632 SFPQP23246 707 aaKnown RBP eCLIP20.63■□□□□ 0.89
GABRB3-209ENST00000555632 CCT6AP40227 531 aaKnown RBP20.63■□□□□ 0.89
GABRB3-209ENST00000555632 POTEBQ6S5H4 581 aa20.63■□□□□ 0.89
GABRB3-209ENST00000555632 EXOC1Q9NV70 894 aa20.63■□□□□ 0.89
GABRB3-209ENST00000555632 GPRC5DQ9NZD1 345 aa20.63■□□□□ 0.89
GABRB3-209ENST00000555632 ADD3Q9UEY8 706 aaKnown RBP20.63■□□□□ 0.89
GABRB3-209ENST00000555632 E9PMD0 336 aa20.63■□□□□ 0.89
GABRB3-209ENST00000555632 MSH4O15457 936 aa20.63■□□□□ 0.89
GABRB3-209ENST00000555632 AMPD3Q01432 767 aa20.63■□□□□ 0.89
GABRB3-209ENST00000555632 IRF2BP1Q8IU81 584 aa20.63■□□□□ 0.89
GABRB3-209ENST00000555632 KIAA0895Q8NCT3 520 aa20.63■□□□□ 0.89
GABRB3-209ENST00000555632 KIAA1683Q9H0B3 1180 aa20.63■□□□□ 0.89
GABRB3-209ENST00000555632 KIAA1024Q9UPX6 916 aa20.63■□□□□ 0.89
GABRB3-209ENST00000555632 IGLV3-22A0A075B6J6 115 aa20.62■□□□□ 0.89
GABRB3-209ENST00000555632 GCOM1H8Y6P7 765 aaPredicted RBP20.62■□□□□ 0.89
GABRB3-209ENST00000555632 MED24O75448 989 aa20.62■□□□□ 0.89
GABRB3-209ENST00000555632 POLR2MP0CAP2 368 aa20.62■□□□□ 0.89
GABRB3-209ENST00000555632 CIITAP33076 1130 aa20.62■□□□□ 0.89
GABRB3-209ENST00000555632 TBX2Q13207 712 aaPredicted RBP20.62■□□□□ 0.89
GABRB3-209ENST00000555632 MCTP2Q6DN12 878 aa20.62■□□□□ 0.89
GABRB3-209ENST00000555632 DLK2Q6UY11 383 aa20.62■□□□□ 0.89
GABRB3-209ENST00000555632 CREBRFQ8IUR6 639 aa20.62■□□□□ 0.89
GABRB3-209ENST00000555632 CCDC150Q8NCX0 1101 aa20.62■□□□□ 0.89
GABRB3-209ENST00000555632 DDX12PQ92771 950 aa20.62■□□□□ 0.89
GABRB3-209ENST00000555632 FHDC1Q9C0D6 1143 aaPredicted RBP20.62■□□□□ 0.89
GABRB3-209ENST00000555632 EMILIN3Q9NT22 766 aa20.62■□□□□ 0.89
GABRB3-209ENST00000555632 GGA3Q9NZ52 723 aa20.62■□□□□ 0.89
GABRB3-209ENST00000555632 SPP2Q13103 211 aa20.62■□□□□ 0.89
GABRB3-209ENST00000555632 KRT31Q15323 416 aa20.62■□□□□ 0.89
GABRB3-209ENST00000555632 SPECC1LQ69YQ0 1117 aa20.62■□□□□ 0.89
GABRB3-209ENST00000555632 SLFN12Q8IYM2 578 aa20.62■□□□□ 0.89
GABRB3-209ENST00000555632 WDR18Q9BV38 432 aa20.62■□□□□ 0.89
GABRB3-209ENST00000555632 SLC39A2Q9NP94 309 aa20.62■□□□□ 0.89
GABRB3-209ENST00000555632 CYP3A4P08684 503 aa20.61■□□□□ 0.89
GABRB3-209ENST00000555632 VCAM1P19320 739 aa20.61■□□□□ 0.89
GABRB3-209ENST00000555632 HYIQ5T013 277 aa20.61■□□□□ 0.89
GABRB3-209ENST00000555632 CPXCR1Q8N123 301 aa20.61■□□□□ 0.89
GABRB3-209ENST00000555632 WDR46O15213 610 aaKnown RBP20.6■□□□□ 0.89
GABRB3-209ENST00000555632 LMNB1P20700 586 aa20.6■□□□□ 0.89
GABRB3-209ENST00000555632 ZNF76P36508 570 aa20.6■□□□□ 0.89
GABRB3-209ENST00000555632 NCAPH2Q6IBW4 605 aa20.6■□□□□ 0.89
GABRB3-209ENST00000555632 TTI2Q6NXR4 508 aa20.6■□□□□ 0.89
GABRB3-209ENST00000555632 PRPF38AQ8NAV1 312 aaKnown RBP20.6■□□□□ 0.89
GABRB3-209ENST00000555632 GLIS3Q8NEA6 775 aa20.6■□□□□ 0.89
GABRB3-209ENST00000555632 WRNIP1Q96S55 665 aa20.6■□□□□ 0.89
GABRB3-209ENST00000555632 SLF1Q9BQI6 1058 aa20.6■□□□□ 0.89
GABRB3-209ENST00000555632 TANGO6Q9C0B7 1094 aa20.6■□□□□ 0.89
GABRB3-209ENST00000555632 CCPG1Q9ULG6 757 aa20.6■□□□□ 0.89
GABRB3-209ENST00000555632 MRPL11Q9Y3B7 192 aaKnown RBP20.6■□□□□ 0.89
GABRB3-209ENST00000555632 POTEFA5A3E0 1075 aa20.6■□□□□ 0.89
GABRB3-209ENST00000555632 NFIBO00712 420 aa20.6■□□□□ 0.89
GABRB3-209ENST00000555632 ICAM1P05362 532 aa20.6■□□□□ 0.89
GABRB3-209ENST00000555632 POTEIP0CG38 1075 aa20.6■□□□□ 0.89
GABRB3-209ENST00000555632 TCP11X2Q5H9J9 407 aa20.6■□□□□ 0.89
GABRB3-209ENST00000555632 POTEGQ6S5H5 508 aa20.6■□□□□ 0.89
GABRB3-209ENST00000555632 POTEEQ6S8J3 1075 aa20.6■□□□□ 0.89
GABRB3-209ENST00000555632 CATSPER3Q86XQ3 398 aa20.6■□□□□ 0.89
GABRB3-209ENST00000555632 GPC2Q8N158 579 aa20.6■□□□□ 0.89
GABRB3-209ENST00000555632 LPAR1Q92633 364 aa20.6■□□□□ 0.89
GABRB3-209ENST00000555632 C16orf45Q96MC5 204 aaPredicted RBP20.6■□□□□ 0.89
GABRB3-209ENST00000555632 VPS16Q9H269 839 aa20.6■□□□□ 0.89
GABRB3-209ENST00000555632 TRMT1Q9NXH9 659 aaKnown RBP20.6■□□□□ 0.89
GABRB3-209ENST00000555632 KCNJ18B7U540 433 aa20.59■□□□□ 0.89
GABRB3-209ENST00000555632 PSMA7O14818 248 aa20.59■□□□□ 0.89
GABRB3-209ENST00000555632 SSBP05455 408 aaKnown RBP eCLIP20.59■□□□□ 0.89
GABRB3-209ENST00000555632 IDEP14735 1019 aa20.59■□□□□ 0.89
GABRB3-209ENST00000555632 ADKP55263 362 aaKnown RBP20.59■□□□□ 0.89
GABRB3-209ENST00000555632 KCNJ12Q14500 433 aa20.59■□□□□ 0.89
GABRB3-209ENST00000555632 DNAJC19Q96DA6 116 aa20.59■□□□□ 0.89
GABRB3-209ENST00000555632 HOOK2Q96ED9 719 aa20.59■□□□□ 0.89
GABRB3-209ENST00000555632 WNK4Q96J92 1243 aa20.59■□□□□ 0.89
GABRB3-209ENST00000555632 DUSP9Q99956 384 aaKnown RBP20.59■□□□□ 0.89
GABRB3-209ENST00000555632 RAVER2Q9HCJ3 691 aaKnown RBP20.59■□□□□ 0.89
GABRB3-209ENST00000555632 TAB2Q9NYJ8 693 aa20.59■□□□□ 0.89
GABRB3-209ENST00000555632 COL20A1Q9P218 1284 aa20.59■□□□□ 0.89
GABRB3-209ENST00000555632 VAV3Q9UKW4 847 aa20.59■□□□□ 0.89
GABRB3-209ENST00000555632 POLR2AP24928 1970 aaKnown RBP20.59■□□□□ 0.89
GABRB3-209ENST00000555632 LRRC10BA6NIK2 292 aa20.59■□□□□ 0.89
GABRB3-209ENST00000555632 TBX3O15119 743 aa20.59■□□□□ 0.89
GABRB3-209ENST00000555632 FLOT1O75955 427 aa20.59■□□□□ 0.89
GABRB3-209ENST00000555632 DDNO94850 711 aaPredicted RBP20.59■□□□□ 0.89
GABRB3-209ENST00000555632 SPATA31C1P0DKV0 1188 aa20.59■□□□□ 0.89
GABRB3-209ENST00000555632 PBX1P40424 430 aa20.59■□□□□ 0.89
GABRB3-209ENST00000555632 PSMC6P62333 389 aa20.59■□□□□ 0.89
GABRB3-209ENST00000555632 TRAF1Q13077 416 aa20.59■□□□□ 0.89
GABRB3-209ENST00000555632 CEP135Q66GS9 1140 aa20.59■□□□□ 0.89
GABRB3-209ENST00000555632 ANKRD40Q6AI12 368 aa20.59■□□□□ 0.89
GABRB3-209ENST00000555632 UNC13DQ70J99 1090 aa20.59■□□□□ 0.89
GABRB3-209ENST00000555632 SRRTQ9BXP5 876 aaKnown RBP20.59■□□□□ 0.89
GABRB3-209ENST00000555632 SPON1Q9HCB6 807 aa20.59■□□□□ 0.89
GABRB3-209ENST00000555632 LIMA1Q9UHB6 759 aaKnown RBP20.59■□□□□ 0.89
GABRB3-209ENST00000555632 ZNF112Q9UJU3 913 aa20.59■□□□□ 0.89
GABRB3-209ENST00000555632 NPHP3-ACAD11A0A0J9YXS1 232 aa20.58■□□□□ 0.89
GABRB3-209ENST00000555632 MEIS1O00470 390 aa20.58■□□□□ 0.89
GABRB3-209ENST00000555632 CACNB1Q02641 598 aaPredicted RBP20.58■□□□□ 0.89
GABRB3-209ENST00000555632 STIM1Q13586 685 aa20.58■□□□□ 0.89
GABRB3-209ENST00000555632 E4F1Q66K89 784 aaPredicted RBP20.58■□□□□ 0.89
GABRB3-209ENST00000555632 SCYL3Q8IZE3 742 aa20.58■□□□□ 0.89
GABRB3-209ENST00000555632 TC2NQ8N9U0 490 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms