RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 A6NJR5 290 aa12.68□□□□□ -0.38
TDP1-212ENST00000555565 HIP1O00291 1037 aa12.68□□□□□ -0.38
TDP1-212ENST00000555565 NFIBO00712 420 aa12.68□□□□□ -0.38
TDP1-212ENST00000555565 GJB5O95377 273 aa12.68□□□□□ -0.38
TDP1-212ENST00000555565 CPT1AP50416 773 aa12.68□□□□□ -0.38
TDP1-212ENST00000555565 PTPN11Q06124 597 aaPredicted RBP12.68□□□□□ -0.38
TDP1-212ENST00000555565 PTCRAQ6ISU1 281 aaPredicted RBP12.68□□□□□ -0.38
TDP1-212ENST00000555565 ZKSCAN3Q9BRR0 538 aa12.68□□□□□ -0.38
TDP1-212ENST00000555565 MTUS1Q9ULD2 1270 aa12.68□□□□□ -0.38
TDP1-212ENST00000555565 C19orf67A6NJJ6 358 aa12.67□□□□□ -0.38
TDP1-212ENST00000555565 NBNO60934 754 aa12.67□□□□□ -0.38
TDP1-212ENST00000555565 KDM4AO75164 1064 aa12.67□□□□□ -0.38
TDP1-212ENST00000555565 CXCL10P02778 98 aa12.67□□□□□ -0.38
TDP1-212ENST00000555565 PDE4AP27815 886 aa12.67□□□□□ -0.38
TDP1-212ENST00000555565 ALDH5A1P51649 535 aaPredicted RBP12.67□□□□□ -0.38
TDP1-212ENST00000555565 BFSP2Q13515 415 aa12.67□□□□□ -0.38
TDP1-212ENST00000555565 BAATQ14032 418 aaPredicted RBP12.67□□□□□ -0.38
TDP1-212ENST00000555565 FAM47CQ5HY64 1035 aa12.67□□□□□ -0.38
TDP1-212ENST00000555565 DGKHQ86XP1 1220 aa12.67□□□□□ -0.38
TDP1-212ENST00000555565 CLEC4DQ8WXI8 215 aa12.67□□□□□ -0.38
TDP1-212ENST00000555565 DHX38Q92620 1227 aaKnown RBP12.67□□□□□ -0.38
TDP1-212ENST00000555565 UIMC1Q96RL1 719 aa12.67□□□□□ -0.38
TDP1-212ENST00000555565 TGS1Q96RS0 853 aaKnown RBP12.67□□□□□ -0.38
TDP1-212ENST00000555565 RAD9AQ99638 391 aa12.67□□□□□ -0.38
TDP1-212ENST00000555565 DSCC1Q9BVC3 393 aa12.67□□□□□ -0.38
TDP1-212ENST00000555565 IL25Q9H293 177 aa12.67□□□□□ -0.38
TDP1-212ENST00000555565 TANC1Q9C0D5 1861 aa12.67□□□□□ -0.38
TDP1-212ENST00000555565 ZNF318Q5VUA4 2279 aa12.66□□□□□ -0.38
TDP1-212ENST00000555565 DCXO43602 365 aa12.66□□□□□ -0.38
TDP1-212ENST00000555565 GOLGA8HP0CJ92 632 aa12.66□□□□□ -0.38
TDP1-212ENST00000555565 SSTR3P32745 418 aaPredicted RBP12.66□□□□□ -0.38
TDP1-212ENST00000555565 KCNJ6P48051 423 aa12.66□□□□□ -0.38
TDP1-212ENST00000555565 NT5C2P49902 561 aa12.66□□□□□ -0.38
TDP1-212ENST00000555565 COL19A1Q14993 1142 aa12.66□□□□□ -0.38
TDP1-212ENST00000555565 SLC30A10Q6XR72 485 aa12.66□□□□□ -0.38
TDP1-212ENST00000555565 OR6J1Q8NGC5 347 aa12.66□□□□□ -0.38
TDP1-212ENST00000555565 AFAP1L1Q8TED9 768 aa12.66□□□□□ -0.38
TDP1-212ENST00000555565 COPS5Q92905 334 aa12.66□□□□□ -0.38
TDP1-212ENST00000555565 PHOX2BQ99453 314 aa12.66□□□□□ -0.38
TDP1-212ENST00000555565 TRIOO75962 3097 aa12.66□□□□□ -0.38
TDP1-212ENST00000555565 WDR19Q8NEZ3 1342 aa12.65□□□□□ -0.38
TDP1-212ENST00000555565 LOC102724159A0A0B4J2E5 919 aa12.65□□□□□ -0.38
TDP1-212ENST00000555565 PTPDC1A2A3K4 754 aa12.65□□□□□ -0.38
TDP1-212ENST00000555565 B4E1Z4 1266 aa12.65□□□□□ -0.38
TDP1-212ENST00000555565 KPNA6O60684 536 aa12.65□□□□□ -0.38
TDP1-212ENST00000555565 GSPT1P15170 499 aaKnown RBP12.65□□□□□ -0.38
TDP1-212ENST00000555565 ZP2Q05996 745 aa12.65□□□□□ -0.38
TDP1-212ENST00000555565 RBL2Q08999 1139 aa12.65□□□□□ -0.38
TDP1-212ENST00000555565 MKRN4PQ13434 485 aaPredicted RBP12.65□□□□□ -0.38
TDP1-212ENST00000555565 PWP2Q15269 919 aaKnown RBP12.65□□□□□ -0.38
TDP1-212ENST00000555565 PTGISQ16647 500 aa12.65□□□□□ -0.38
TDP1-212ENST00000555565 IMMTQ16891 758 aaKnown RBP12.65□□□□□ -0.38
TDP1-212ENST00000555565 CCDC178Q5BJE1 867 aa12.65□□□□□ -0.38
TDP1-212ENST00000555565 GPATCH4Q5T3I0 446 aaKnown RBP12.65□□□□□ -0.38
TDP1-212ENST00000555565 GDF6Q6KF10 455 aaPredicted RBP12.65□□□□□ -0.38
TDP1-212ENST00000555565 TRAF7Q6Q0C0 670 aa12.65□□□□□ -0.38
TDP1-212ENST00000555565 HFE2Q6ZVN8 426 aa12.65□□□□□ -0.38
TDP1-212ENST00000555565 SESTD1Q86VW0 696 aa12.65□□□□□ -0.38
TDP1-212ENST00000555565 IQCA1Q86XH1 822 aa12.65□□□□□ -0.38
TDP1-212ENST00000555565 ENAHQ8N8S7 591 aaPredicted RBP12.65□□□□□ -0.38
TDP1-212ENST00000555565 PNMA1Q8ND90 353 aa12.65□□□□□ -0.38
TDP1-212ENST00000555565 C17orf80Q9BSJ5 609 aa12.65□□□□□ -0.38
TDP1-212ENST00000555565 ZBED2Q9BTP6 218 aa12.65□□□□□ -0.38
TDP1-212ENST00000555565 UBA5Q9GZZ9 404 aa12.65□□□□□ -0.38
TDP1-212ENST00000555565 CPVLQ9H3G5 476 aa12.65□□□□□ -0.38
TDP1-212ENST00000555565 GPHNQ9NQX3 736 aaPredicted RBP12.65□□□□□ -0.38
TDP1-212ENST00000555565 ZSWIM5Q9P217 1185 aa12.65□□□□□ -0.38
TDP1-212ENST00000555565 ADD3Q9UEY8 706 aaKnown RBP12.65□□□□□ -0.38
TDP1-212ENST00000555565 TRIP12Q14669 1992 aaPredicted RBP12.64□□□□□ -0.39
TDP1-212ENST00000555565 H3BQ06 376 aaPredicted RBP12.64□□□□□ -0.39
TDP1-212ENST00000555565 ARIH2O95376 493 aa12.64□□□□□ -0.39
TDP1-212ENST00000555565 SELPP16109 830 aa12.64□□□□□ -0.39
TDP1-212ENST00000555565 EDNRBP24530 442 aa12.64□□□□□ -0.39
TDP1-212ENST00000555565 CALML3P27482 149 aa12.64□□□□□ -0.39
TDP1-212ENST00000555565 RPS6P62753 249 aaKnown RBP12.64□□□□□ -0.39
TDP1-212ENST00000555565 CSPP1Q1MSJ5 1256 aa12.64□□□□□ -0.39
TDP1-212ENST00000555565 PUS10Q3MIT2 529 aaKnown RBP12.64□□□□□ -0.39
TDP1-212ENST00000555565 TTC22Q5TAA0 569 aa12.64□□□□□ -0.39
TDP1-212ENST00000555565 CNKSR3Q6P9H4 555 aa12.64□□□□□ -0.39
TDP1-212ENST00000555565 RNF207Q6ZRF8 634 aa12.64□□□□□ -0.39
TDP1-212ENST00000555565 CAGE1Q8TC20 777 aa12.64□□□□□ -0.39
TDP1-212ENST00000555565 KAT2BQ92831 832 aa12.64□□□□□ -0.39
TDP1-212ENST00000555565 ZSCAN10Q96SZ4 725 aaPredicted RBP12.64□□□□□ -0.39
TDP1-212ENST00000555565 KAT14Q9H8E8 782 aa12.64□□□□□ -0.39
TDP1-212ENST00000555565 CTNNA3Q9UI47 895 aa12.64□□□□□ -0.39
TDP1-212ENST00000555565 PNMA2Q9UL42 364 aa12.64□□□□□ -0.39
TDP1-212ENST00000555565 C5orf42Q9H799 3197 aa12.64□□□□□ -0.39
TDP1-212ENST00000555565 MYH6P13533 1939 aa12.63□□□□□ -0.39
TDP1-212ENST00000555565 ABHD14A-ACY1A0A1B0GW23 586 aa12.63□□□□□ -0.39
TDP1-212ENST00000555565 NKRFO15226 690 aaKnown RBP eCLIP12.63□□□□□ -0.39
TDP1-212ENST00000555565 IRX6P78412 446 aaPredicted RBP12.63□□□□□ -0.39
TDP1-212ENST00000555565 MBTPS1Q14703 1052 aa12.63□□□□□ -0.39
TDP1-212ENST00000555565 USH1GQ495M9 461 aa12.63□□□□□ -0.39
TDP1-212ENST00000555565 LRRC8DQ7L1W4 858 aa12.63□□□□□ -0.39
TDP1-212ENST00000555565 MRPL38Q96DV4 380 aaKnown RBP12.63□□□□□ -0.39
TDP1-212ENST00000555565 CKBP12277 381 aa12.62□□□□□ -0.39
TDP1-212ENST00000555565 IRS1P35568 1242 aa12.62□□□□□ -0.39
TDP1-212ENST00000555565 LTBRP36941 435 aa12.62□□□□□ -0.39
TDP1-212ENST00000555565 HTRA4P83105 476 aaPredicted RBP12.62□□□□□ -0.39
TDP1-212ENST00000555565 CDC37Q16543 378 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms