RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 ZHX1Q9UKY1 873 aaPredicted RBP16.28■□□□□ 0.2
CHD8-208ENST00000555301 RBBP6Q7Z6E9 1792 aaKnown RBP16.28■□□□□ 0.2
CHD8-208ENST00000555301 SMCHD1A6NHR9 2005 aa16.28■□□□□ 0.2
CHD8-208ENST00000555301 CASP8AP2Q9UKL3 1982 aa16.27■□□□□ 0.2
CHD8-208ENST00000555301 CYBAP13498 195 aa16.27■□□□□ 0.2
CHD8-208ENST00000555301 ZNF76P36508 570 aa16.27■□□□□ 0.2
CHD8-208ENST00000555301 MRPS9P82933 396 aaKnown RBP16.27■□□□□ 0.2
CHD8-208ENST00000555301 TRIM32Q13049 653 aa16.27■□□□□ 0.2
CHD8-208ENST00000555301 EEPD1Q7L9B9 569 aa16.27■□□□□ 0.2
CHD8-208ENST00000555301 NEK8Q86SG6 692 aa16.27■□□□□ 0.2
CHD8-208ENST00000555301 NLRX1Q86UT6 975 aa16.27■□□□□ 0.2
CHD8-208ENST00000555301 FBXO16Q8IX29 292 aaPredicted RBP16.27■□□□□ 0.2
CHD8-208ENST00000555301 ARMC5Q96C12 935 aa16.27■□□□□ 0.2
CHD8-208ENST00000555301 NAP1L4Q99733 375 aaKnown RBP16.27■□□□□ 0.2
CHD8-208ENST00000555301 KATNBL1Q9H079 304 aa16.27■□□□□ 0.2
CHD8-208ENST00000555301 DDX49Q9Y6V7 483 aaKnown RBP16.27■□□□□ 0.2
CHD8-208ENST00000555301 ZNF865P0CJ78 1059 aaPredicted RBP16.26■□□□□ 0.19
CHD8-208ENST00000555301 CIITAP33076 1130 aa16.26■□□□□ 0.19
CHD8-208ENST00000555301 INF2Q27J81 1249 aa16.26■□□□□ 0.19
CHD8-208ENST00000555301 CEP55Q53EZ4 464 aa16.26■□□□□ 0.19
CHD8-208ENST00000555301 EARS2Q5JPH6 523 aaKnown RBP16.26■□□□□ 0.19
CHD8-208ENST00000555301 PRAMEF19Q5SWL8 479 aa16.26■□□□□ 0.19
CHD8-208ENST00000555301 KCNV1Q6PIU1 500 aa16.26■□□□□ 0.19
CHD8-208ENST00000555301 MOXD1Q6UVY6 613 aa16.26■□□□□ 0.19
CHD8-208ENST00000555301 SCFD2Q8WU76 684 aa16.26■□□□□ 0.19
CHD8-208ENST00000555301 CDHR1Q96JP9 859 aa16.26■□□□□ 0.19
CHD8-208ENST00000555301 INPP4AQ96PE3 977 aaPredicted RBP16.26■□□□□ 0.19
CHD8-208ENST00000555301 HMX1Q9NP08 348 aaPredicted RBP16.26■□□□□ 0.19
CHD8-208ENST00000555301 RTEL1Q9NZ71 1219 aa16.26■□□□□ 0.19
CHD8-208ENST00000555301 FAM184BQ9ULE4 1060 aa16.26■□□□□ 0.19
CHD8-208ENST00000555301 MTMR6Q9Y217 621 aa16.26■□□□□ 0.19
CHD8-208ENST00000555301 UBIAD1Q9Y5Z9 338 aa16.26■□□□□ 0.19
CHD8-208ENST00000555301 RBM47A0AV96 593 aaKnown RBP16.25■□□□□ 0.19
CHD8-208ENST00000555301 KIF28PB7ZC32 967 aa16.25■□□□□ 0.19
CHD8-208ENST00000555301 MAFGO15525 162 aa16.25■□□□□ 0.19
CHD8-208ENST00000555301 SEPT4O43236 478 aa16.25■□□□□ 0.19
CHD8-208ENST00000555301 AKR1A1P14550 325 aa16.25■□□□□ 0.19
CHD8-208ENST00000555301 TRAPPC10P48553 1259 aa16.25■□□□□ 0.19
CHD8-208ENST00000555301 TTLL4Q14679 1199 aa16.25■□□□□ 0.19
CHD8-208ENST00000555301 LETM2Q2VYF4 491 aa16.25■□□□□ 0.19
CHD8-208ENST00000555301 IQSEC1Q6DN90 963 aa16.25■□□□□ 0.19
CHD8-208ENST00000555301 TAPT1Q6NXT6 567 aa16.25■□□□□ 0.19
CHD8-208ENST00000555301 NIPA1Q7RTP0 329 aa16.25■□□□□ 0.19
CHD8-208ENST00000555301 BRAPQ7Z569 592 aa16.25■□□□□ 0.19
CHD8-208ENST00000555301 GPRASP2Q96D09 838 aa16.25■□□□□ 0.19
CHD8-208ENST00000555301 MXRA8Q9BRK3 442 aa16.25■□□□□ 0.19
CHD8-208ENST00000555301 JADE2Q9NQC1 790 aa16.25■□□□□ 0.19
CHD8-208ENST00000555301 NOL7Q9UMY1 257 aaKnown RBP16.25■□□□□ 0.19
CHD8-208ENST00000555301 CYP3A7-CYP3A51PA0A087WV96 503 aa16.24■□□□□ 0.19
CHD8-208ENST00000555301 FIBPO43427 364 aa16.24■□□□□ 0.19
CHD8-208ENST00000555301 MSCO60682 206 aa16.24■□□□□ 0.19
CHD8-208ENST00000555301 RGS20O76081 388 aa16.24■□□□□ 0.19
CHD8-208ENST00000555301 TGFB3P10600 412 aa16.24■□□□□ 0.19
CHD8-208ENST00000555301 GCFC2P16383 781 aaKnown RBP16.24■□□□□ 0.19
CHD8-208ENST00000555301 ITGB5P18084 799 aa16.24■□□□□ 0.19
CHD8-208ENST00000555301 CYP3A7P24462 503 aa16.24■□□□□ 0.19
CHD8-208ENST00000555301 CNGA1P29973 690 aa16.24■□□□□ 0.19
CHD8-208ENST00000555301 ICAM3P32942 547 aa16.24■□□□□ 0.19
CHD8-208ENST00000555301 SETQ01105 290 aaPredicted RBP16.24■□□□□ 0.19
CHD8-208ENST00000555301 MTMR1Q13613 665 aa16.24■□□□□ 0.19
CHD8-208ENST00000555301 CCDC144BQ3MJ40 725 aa16.24■□□□□ 0.19
CHD8-208ENST00000555301 PPP4R3AQ6IN85 833 aa16.24■□□□□ 0.19
CHD8-208ENST00000555301 SEPT14Q6ZU15 432 aa16.24■□□□□ 0.19
CHD8-208ENST00000555301 TRPV1Q8NER1 839 aa16.24■□□□□ 0.19
CHD8-208ENST00000555301 ZNF333Q96JL9 665 aa16.24■□□□□ 0.19
CHD8-208ENST00000555301 ZFP91Q96JP5 570 aaPredicted RBP16.24■□□□□ 0.19
CHD8-208ENST00000555301 ZSCAN16Q9H4T2 348 aaPredicted RBP16.24■□□□□ 0.19
CHD8-208ENST00000555301 MRVI1Q9Y6F6 885 aa16.24■□□□□ 0.19
CHD8-208ENST00000555301 FAM205CA6NFA0 338 aa16.23■□□□□ 0.19
CHD8-208ENST00000555301 FAM86B1E9PN63 330 aa16.23■□□□□ 0.19
CHD8-208ENST00000555301 MEIS1O00470 390 aa16.23■□□□□ 0.19
CHD8-208ENST00000555301 NKRFO15226 690 aaKnown RBP eCLIP16.23■□□□□ 0.19
CHD8-208ENST00000555301 FAM86B2P0C5J1 330 aa16.23■□□□□ 0.19
CHD8-208ENST00000555301 CCND3P30281 292 aaPredicted RBP16.23■□□□□ 0.19
CHD8-208ENST00000555301 ADCYAP1R1P41586 468 aa16.23■□□□□ 0.19
CHD8-208ENST00000555301 RILPL1Q5EBL4 403 aa16.23■□□□□ 0.19
CHD8-208ENST00000555301 WDR11Q9BZH6 1224 aa16.23■□□□□ 0.19
CHD8-208ENST00000555301 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.23■□□□□ 0.19
CHD8-208ENST00000555301 PDGFCQ9NRA1 345 aa16.23■□□□□ 0.19
CHD8-208ENST00000555301 LCTP09848 1927 aa16.22■□□□□ 0.19
CHD8-208ENST00000555301 IGLV3-22A0A075B6J6 115 aa16.22■□□□□ 0.19
CHD8-208ENST00000555301 SPATA31C2B4DYI2 1134 aa16.22■□□□□ 0.19
CHD8-208ENST00000555301 EDIL3O43854 480 aa16.22■□□□□ 0.19
CHD8-208ENST00000555301 CCNT1O60563 726 aaKnown RBP16.22■□□□□ 0.19
CHD8-208ENST00000555301 ZSCAN22P10073 491 aaPredicted RBP16.22■□□□□ 0.19
CHD8-208ENST00000555301 TXNP10599 105 aaKnown RBP16.22■□□□□ 0.19
CHD8-208ENST00000555301 CCL5P13501 91 aa16.22■□□□□ 0.19
CHD8-208ENST00000555301 TNFAIP2Q03169 654 aa16.22■□□□□ 0.19
CHD8-208ENST00000555301 ORC2Q13416 577 aaPredicted RBP16.22■□□□□ 0.19
CHD8-208ENST00000555301 Q4G0T1 1027 aa16.22■□□□□ 0.19
CHD8-208ENST00000555301 DUSP28Q4G0W2 176 aa16.22■□□□□ 0.19
CHD8-208ENST00000555301 PRR16Q569H4 304 aa16.22■□□□□ 0.19
CHD8-208ENST00000555301 COL13A1Q5TAT6 717 aaPredicted RBP16.22■□□□□ 0.19
CHD8-208ENST00000555301 FERMT3Q86UX7 667 aa16.22■□□□□ 0.19
CHD8-208ENST00000555301 PLA2G4DQ86XP0 818 aa16.22■□□□□ 0.19
CHD8-208ENST00000555301 CYP2W1Q8TAV3 490 aa16.22■□□□□ 0.19
CHD8-208ENST00000555301 MBOAT7Q96N66 472 aa16.22■□□□□ 0.19
CHD8-208ENST00000555301 RNF208Q9H0X6 261 aa16.22■□□□□ 0.19
CHD8-208ENST00000555301 KCNH7Q9NS40 1196 aa16.22■□□□□ 0.19
CHD8-208ENST00000555301 DDX20Q9UHI6 824 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms