RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 NRDCO43847 1150 aa7.54□□□□□ -1.2
CKS1BP1-201ENST00000555221 WNT11O96014 354 aa7.54□□□□□ -1.2
CKS1BP1-201ENST00000555221 PCBP1Q15365 356 aaKnown RBP eCLIP7.54□□□□□ -1.2
CKS1BP1-201ENST00000555221 NR0B2Q15466 257 aa7.54□□□□□ -1.2
CKS1BP1-201ENST00000555221 ABHD17CQ6PCB6 329 aa7.54□□□□□ -1.2
CKS1BP1-201ENST00000555221 C16orf59Q7L2K0 433 aa7.54□□□□□ -1.2
CKS1BP1-201ENST00000555221 NLRP10Q86W26 655 aa7.54□□□□□ -1.2
CKS1BP1-201ENST00000555221 OR2W6PQ8NHA6 318 aa7.54□□□□□ -1.2
CKS1BP1-201ENST00000555221 CDIP1Q9H305 208 aa7.54□□□□□ -1.2
CKS1BP1-201ENST00000555221 MARCH2Q9P0N8 246 aa7.54□□□□□ -1.2
CKS1BP1-201ENST00000555221 FBXL7Q9UJT9 491 aa7.54□□□□□ -1.2
CKS1BP1-201ENST00000555221 COA3Q9Y2R0 106 aaPredicted RBP7.54□□□□□ -1.2
CKS1BP1-201ENST00000555221 COQ6Q9Y2Z9 468 aa7.54□□□□□ -1.2
CKS1BP1-201ENST00000555221 CCDC66A2RUB6 948 aa7.53□□□□□ -1.2
CKS1BP1-201ENST00000555221 CKMP06732 381 aa7.53□□□□□ -1.2
CKS1BP1-201ENST00000555221 RAC2P15153 192 aa7.53□□□□□ -1.2
CKS1BP1-201ENST00000555221 GDNFP39905 211 aa7.53□□□□□ -1.2
CKS1BP1-201ENST00000555221 SCNN1BP51168 640 aa7.53□□□□□ -1.2
CKS1BP1-201ENST00000555221 PLCL1Q15111 1095 aa7.53□□□□□ -1.2
CKS1BP1-201ENST00000555221 RPUSD2Q8IZ73 545 aaKnown RBP7.53□□□□□ -1.2
CKS1BP1-201ENST00000555221 LZTR1Q8N653 840 aa7.53□□□□□ -1.2
CKS1BP1-201ENST00000555221 ATL2Q8NHH9 583 aa7.53□□□□□ -1.2
CKS1BP1-201ENST00000555221 USP33Q8TEY7 942 aa7.53□□□□□ -1.2
CKS1BP1-201ENST00000555221 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.53□□□□□ -1.2
CKS1BP1-201ENST00000555221 PRDM7Q9NQW5 492 aa7.53□□□□□ -1.2
CKS1BP1-201ENST00000555221 TYW1Q9NV66 732 aaKnown RBP7.53□□□□□ -1.2
CKS1BP1-201ENST00000555221 PCMTD2Q9NV79 361 aa7.53□□□□□ -1.2
CKS1BP1-201ENST00000555221 IMPACTQ9P2X3 320 aa7.53□□□□□ -1.2
CKS1BP1-201ENST00000555221 PPARGC1AQ9UBK2 798 aaKnown RBP7.53□□□□□ -1.2
CKS1BP1-201ENST00000555221 C22orf46C9J442 243 aa7.52□□□□□ -1.21
CKS1BP1-201ENST00000555221 CBX4O00257 560 aa7.52□□□□□ -1.21
CKS1BP1-201ENST00000555221 GLRX3O76003 335 aaKnown RBP7.52□□□□□ -1.21
CKS1BP1-201ENST00000555221 FUCA1P04066 466 aa7.52□□□□□ -1.21
CKS1BP1-201ENST00000555221 POU3F3P20264 500 aaPredicted RBP7.52□□□□□ -1.21
CKS1BP1-201ENST00000555221 CDK11BP21127 795 aaKnown RBP7.52□□□□□ -1.21
CKS1BP1-201ENST00000555221 DNM2P50570 870 aa7.52□□□□□ -1.21
CKS1BP1-201ENST00000555221 SPIRE1Q08AE8 756 aa7.52□□□□□ -1.21
CKS1BP1-201ENST00000555221 SART3Q15020 963 aaKnown RBP7.52□□□□□ -1.21
CKS1BP1-201ENST00000555221 CRY1Q16526 586 aa7.52□□□□□ -1.21
CKS1BP1-201ENST00000555221 TMEM177Q53S58 311 aa7.52□□□□□ -1.21
CKS1BP1-201ENST00000555221 MROH9Q5TGP6 573 aa7.52□□□□□ -1.21
CKS1BP1-201ENST00000555221 NFXL1Q6ZNB6 911 aa7.52□□□□□ -1.21
CKS1BP1-201ENST00000555221 DDX42Q86XP3 938 aaKnown RBP eCLIP7.52□□□□□ -1.21
CKS1BP1-201ENST00000555221 RIOX2Q8IUF8 465 aa7.52□□□□□ -1.21
CKS1BP1-201ENST00000555221 TEX2Q8IWB9 1127 aa7.52□□□□□ -1.21
CKS1BP1-201ENST00000555221 TP53INP2Q8IXH6 220 aa7.52□□□□□ -1.21
CKS1BP1-201ENST00000555221 LILRA2Q8N149 483 aa7.52□□□□□ -1.21
CKS1BP1-201ENST00000555221 NUP43Q8NFH3 380 aa7.52□□□□□ -1.21
CKS1BP1-201ENST00000555221 USP7Q93009 1102 aa7.52□□□□□ -1.21
CKS1BP1-201ENST00000555221 KCNJ15Q99712 375 aa7.52□□□□□ -1.21
CKS1BP1-201ENST00000555221 MTA3Q9BTC8 594 aa7.52□□□□□ -1.21
CKS1BP1-201ENST00000555221 EPB41L1Q9H4G0 881 aa7.52□□□□□ -1.21
CKS1BP1-201ENST00000555221 PDLIM7Q9NR12 457 aa7.52□□□□□ -1.21
CKS1BP1-201ENST00000555221 CATSPERZQ9NTU4 200 aa7.52□□□□□ -1.21
CKS1BP1-201ENST00000555221 ACSL6Q9UKU0 697 aa7.52□□□□□ -1.21
CKS1BP1-201ENST00000555221 RWDD3Q9Y3V2 267 aa7.52□□□□□ -1.21
CKS1BP1-201ENST00000555221 X6R8D5 127 aa7.52□□□□□ -1.21
CKS1BP1-201ENST00000555221 A0A1W2PQJ5 194 aa7.51□□□□□ -1.21
CKS1BP1-201ENST00000555221 M0R2C6 588 aa7.51□□□□□ -1.21
CKS1BP1-201ENST00000555221 BRINP1O60477 761 aa7.51□□□□□ -1.21
CKS1BP1-201ENST00000555221 DGKIO75912 1065 aa7.51□□□□□ -1.21
CKS1BP1-201ENST00000555221 HPXP02790 462 aa7.51□□□□□ -1.21
CKS1BP1-201ENST00000555221 GNAT1P11488 350 aa7.51□□□□□ -1.21
CKS1BP1-201ENST00000555221 FPR2P25090 351 aa7.51□□□□□ -1.21
CKS1BP1-201ENST00000555221 STRN3Q13033 797 aa7.51□□□□□ -1.21
CKS1BP1-201ENST00000555221 SEPT7Q16181 437 aaKnown RBP7.51□□□□□ -1.21
CKS1BP1-201ENST00000555221 CABP7Q86V35 215 aa7.51□□□□□ -1.21
CKS1BP1-201ENST00000555221 PRPF38AQ8NAV1 312 aaKnown RBP7.51□□□□□ -1.21
CKS1BP1-201ENST00000555221 CHST14Q8NCH0 376 aa7.51□□□□□ -1.21
CKS1BP1-201ENST00000555221 PLEKHO2Q8TD55 490 aa7.51□□□□□ -1.21
CKS1BP1-201ENST00000555221 ZKSCAN5Q9Y2L8 839 aa7.51□□□□□ -1.21
CKS1BP1-201ENST00000555221 ALG1L2C9J202 215 aa7.5□□□□□ -1.21
CKS1BP1-201ENST00000555221 GAS7O60861 476 aa7.5□□□□□ -1.21
CKS1BP1-201ENST00000555221 PPP1R11O60927 126 aaPredicted RBP7.5□□□□□ -1.21
CKS1BP1-201ENST00000555221 F2P00734 622 aa7.5□□□□□ -1.21
CKS1BP1-201ENST00000555221 PYGMP11217 842 aa7.5□□□□□ -1.21
CKS1BP1-201ENST00000555221 PRKCAP17252 672 aa7.5□□□□□ -1.21
CKS1BP1-201ENST00000555221 PMLP29590 882 aa7.5□□□□□ -1.21
CKS1BP1-201ENST00000555221 MVKQ03426 396 aa7.5□□□□□ -1.21
CKS1BP1-201ENST00000555221 SNX17Q15036 470 aa7.5□□□□□ -1.21
CKS1BP1-201ENST00000555221 ARHGAP44Q17R89 818 aa7.5□□□□□ -1.21
CKS1BP1-201ENST00000555221 OVCH1Q7RTY7 1134 aa7.5□□□□□ -1.21
CKS1BP1-201ENST00000555221 STRA8Q7Z7C7 330 aa7.5□□□□□ -1.21
CKS1BP1-201ENST00000555221 TTC1Q99614 292 aa7.5□□□□□ -1.21
CKS1BP1-201ENST00000555221 JAM3Q9BX67 310 aa7.5□□□□□ -1.21
CKS1BP1-201ENST00000555221 FAM126AQ9BYI3 521 aaPredicted RBP7.5□□□□□ -1.21
CKS1BP1-201ENST00000555221 HOMER2Q9NSB8 354 aa7.5□□□□□ -1.21
CKS1BP1-201ENST00000555221 DDX56Q9NY93 547 aaKnown RBP7.5□□□□□ -1.21
CKS1BP1-201ENST00000555221 ZEB2O60315 1214 aa7.49□□□□□ -1.21
CKS1BP1-201ENST00000555221 EYA4O95677 639 aa7.49□□□□□ -1.21
CKS1BP1-201ENST00000555221 LACTBP83111 547 aaPredicted RBP7.49□□□□□ -1.21
CKS1BP1-201ENST00000555221 CHRNA2Q15822 529 aa7.49□□□□□ -1.21
CKS1BP1-201ENST00000555221 CISD2Q8N5K1 135 aaKnown RBP7.49□□□□□ -1.21
CKS1BP1-201ENST00000555221 C2orf69Q8N8R5 385 aa7.49□□□□□ -1.21
CKS1BP1-201ENST00000555221 PLCD4Q9BRC7 762 aa7.49□□□□□ -1.21
CKS1BP1-201ENST00000555221 IFT22Q9H7X7 185 aa7.49□□□□□ -1.21
CKS1BP1-201ENST00000555221 MBNL3Q9NUK0 354 aaKnown RBP7.49□□□□□ -1.21
CKS1BP1-201ENST00000555221 B4GALT6Q9UBX8 382 aa7.49□□□□□ -1.21
CKS1BP1-201ENST00000555221 ADAMTS6Q9UKP5 1117 aa7.49□□□□□ -1.21
CKS1BP1-201ENST00000555221 NUB1Q9Y5A7 615 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms