RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 IFIT1BQ5T764 474 aaKnown RBP18.28■□□□□ 0.52
ARHGEF40-205ENST00000555052 CYB5R4Q7L1T6 521 aa18.28■□□□□ 0.52
ARHGEF40-205ENST00000555052 SYMPKQ92797 1274 aaKnown RBP18.28■□□□□ 0.52
ARHGEF40-205ENST00000555052 EMID1Q96A84 441 aaPredicted RBP18.28■□□□□ 0.52
ARHGEF40-205ENST00000555052 VAT1LQ9HCJ6 419 aa18.28■□□□□ 0.52
ARHGEF40-205ENST00000555052 PXMP2Q9NR77 195 aa18.28■□□□□ 0.52
ARHGEF40-205ENST00000555052 MAD2L2Q9UI95 211 aa18.28■□□□□ 0.52
ARHGEF40-205ENST00000555052 EIF2AK2P19525 551 aaKnown RBP18.27■□□□□ 0.52
ARHGEF40-205ENST00000555052 BFSP2Q13515 415 aa18.27■□□□□ 0.52
ARHGEF40-205ENST00000555052 SLC35G1Q2M3R5 365 aa18.27■□□□□ 0.52
ARHGEF40-205ENST00000555052 TTC22Q5TAA0 569 aa18.27■□□□□ 0.52
ARHGEF40-205ENST00000555052 PPP2R2DQ66LE6 453 aa18.27■□□□□ 0.52
ARHGEF40-205ENST00000555052 AMNQ9BXJ7 453 aa18.27■□□□□ 0.52
ARHGEF40-205ENST00000555052 DDX41Q9UJV9 622 aaKnown RBP18.27■□□□□ 0.52
ARHGEF40-205ENST00000555052 KLRF2D3W0D1 207 aa18.26■□□□□ 0.51
ARHGEF40-205ENST00000555052 EIF3JO75822 258 aaKnown RBP18.26■□□□□ 0.51
ARHGEF40-205ENST00000555052 CFBP00751 764 aa18.26■□□□□ 0.51
ARHGEF40-205ENST00000555052 NR3C2P08235 984 aa18.26■□□□□ 0.51
ARHGEF40-205ENST00000555052 ACTN1P12814 892 aa18.26■□□□□ 0.51
ARHGEF40-205ENST00000555052 ARHGEF16Q5VV41 709 aa18.26■□□□□ 0.51
ARHGEF40-205ENST00000555052 GDF6Q6KF10 455 aaPredicted RBP18.26■□□□□ 0.51
ARHGEF40-205ENST00000555052 RETREG2Q8NC44 543 aa18.26■□□□□ 0.51
ARHGEF40-205ENST00000555052 PPM1EQ8WY54 764 aa18.26■□□□□ 0.51
ARHGEF40-205ENST00000555052 PALM3A6NDB9 673 aaPredicted RBP18.25■□□□□ 0.51
ARHGEF40-205ENST00000555052 ZBTB5O15062 677 aa18.25■□□□□ 0.51
ARHGEF40-205ENST00000555052 RGS20O76081 388 aa18.25■□□□□ 0.51
ARHGEF40-205ENST00000555052 HOXD8P13378 290 aaPredicted RBP18.25■□□□□ 0.51
ARHGEF40-205ENST00000555052 IGFBP4P22692 258 aa18.25■□□□□ 0.51
ARHGEF40-205ENST00000555052 RBL2Q08999 1139 aa18.25■□□□□ 0.51
ARHGEF40-205ENST00000555052 PTGISQ16647 500 aa18.25■□□□□ 0.51
ARHGEF40-205ENST00000555052 CHST3Q7LGC8 479 aa18.25■□□□□ 0.51
ARHGEF40-205ENST00000555052 CAGE1Q8TC20 777 aa18.25■□□□□ 0.51
ARHGEF40-205ENST00000555052 DHX38Q92620 1227 aaKnown RBP18.25■□□□□ 0.51
ARHGEF40-205ENST00000555052 SLC9A7Q96T83 725 aa18.25■□□□□ 0.51
ARHGEF40-205ENST00000555052 THEGQ9P2T0 379 aa18.25■□□□□ 0.51
ARHGEF40-205ENST00000555052 NOD1Q9Y239 953 aa18.25■□□□□ 0.51
ARHGEF40-205ENST00000555052 MYH7BA7E2Y1 1941 aa18.25■□□□□ 0.51
ARHGEF40-205ENST00000555052 PTPRSQ13332 1948 aa18.24■□□□□ 0.51
ARHGEF40-205ENST00000555052 CYP21A2P08686 494 aa18.24■□□□□ 0.51
ARHGEF40-205ENST00000555052 CASTP20810 708 aaKnown RBP18.24■□□□□ 0.51
ARHGEF40-205ENST00000555052 GPNMBQ14956 572 aa18.24■□□□□ 0.51
ARHGEF40-205ENST00000555052 DGKDQ16760 1214 aa18.24■□□□□ 0.51
ARHGEF40-205ENST00000555052 TMEM67Q5HYA8 995 aa18.24■□□□□ 0.51
ARHGEF40-205ENST00000555052 STOX1Q6ZVD7 989 aa18.24■□□□□ 0.51
ARHGEF40-205ENST00000555052 PPTC7Q8NI37 304 aa18.24■□□□□ 0.51
ARHGEF40-205ENST00000555052 PHOSPHO2Q8TCD6 241 aa18.24■□□□□ 0.51
ARHGEF40-205ENST00000555052 AFAP1L1Q8TED9 768 aa18.24■□□□□ 0.51
ARHGEF40-205ENST00000555052 ATXN2LQ8WWM7 1075 aaKnown RBP18.24■□□□□ 0.51
ARHGEF40-205ENST00000555052 PDCD2LQ9BRP1 358 aa18.24■□□□□ 0.51
ARHGEF40-205ENST00000555052 MAP3K20Q9NYL2 800 aaKnown RBP18.24■□□□□ 0.51
ARHGEF40-205ENST00000555052 GTF2IRD1Q9UHL9 959 aa18.24■□□□□ 0.51
ARHGEF40-205ENST00000555052 PCDHA1Q9Y5I3 950 aa18.24■□□□□ 0.51
ARHGEF40-205ENST00000555052 MRVI1Q9Y6F6 885 aa18.24■□□□□ 0.51
ARHGEF40-205ENST00000555052 HAS3O00219 553 aa18.23■□□□□ 0.51
ARHGEF40-205ENST00000555052 F2P00734 622 aa18.23■□□□□ 0.51
ARHGEF40-205ENST00000555052 CA3P07451 260 aa18.23■□□□□ 0.51
ARHGEF40-205ENST00000555052 CHMP4BP1P59074 171 aa18.23■□□□□ 0.51
ARHGEF40-205ENST00000555052 PTH1RQ03431 593 aa18.23■□□□□ 0.51
ARHGEF40-205ENST00000555052 LAMC2Q13753 1193 aa18.23■□□□□ 0.51
ARHGEF40-205ENST00000555052 GRM4Q14833 912 aa18.23■□□□□ 0.51
ARHGEF40-205ENST00000555052 CCDC85BQ15834 202 aaPredicted RBP18.23■□□□□ 0.51
ARHGEF40-205ENST00000555052 SAMD3Q8N6K7 520 aa18.23■□□□□ 0.51
ARHGEF40-205ENST00000555052 CCDC155Q8N6L0 562 aa18.23■□□□□ 0.51
ARHGEF40-205ENST00000555052 RIOX1Q9H6W3 641 aa18.23■□□□□ 0.51
ARHGEF40-205ENST00000555052 SENP2Q9HC62 589 aa18.23■□□□□ 0.51
ARHGEF40-205ENST00000555052 TAF6LQ9Y6J9 622 aa18.23■□□□□ 0.51
ARHGEF40-205ENST00000555052 BAIAP3O94812 1187 aa18.22■□□□□ 0.51
ARHGEF40-205ENST00000555052 ARHGEF15O94989 841 aa18.22■□□□□ 0.51
ARHGEF40-205ENST00000555052 CHMLP26374 656 aa18.22■□□□□ 0.51
ARHGEF40-205ENST00000555052 PSEN2P49810 448 aa18.22■□□□□ 0.51
ARHGEF40-205ENST00000555052 TRDNQ13061 729 aa18.22■□□□□ 0.51
ARHGEF40-205ENST00000555052 VSIG10LQ86VR7 867 aa18.22■□□□□ 0.51
ARHGEF40-205ENST00000555052 HERC6Q8IVU3 1022 aa18.22■□□□□ 0.51
ARHGEF40-205ENST00000555052 IL31RAQ8NI17 732 aa18.22■□□□□ 0.51
ARHGEF40-205ENST00000555052 FTOQ9C0B1 505 aaKnown RBP eCLIP18.22■□□□□ 0.51
ARHGEF40-205ENST00000555052 HDAC6Q9UBN7 1215 aa18.22■□□□□ 0.51
ARHGEF40-205ENST00000555052 U3KPZ7 1027 aaPredicted RBP18.22■□□□□ 0.51
ARHGEF40-205ENST00000555052 CYTH3O43739 400 aa18.21■□□□□ 0.51
ARHGEF40-205ENST00000555052 ZNF286BP0CG31 522 aa18.21■□□□□ 0.51
ARHGEF40-205ENST00000555052 SELPP16109 830 aa18.21■□□□□ 0.51
ARHGEF40-205ENST00000555052 POU3F3P20264 500 aaPredicted RBP18.21■□□□□ 0.51
ARHGEF40-205ENST00000555052 HOXA13P31271 388 aaPredicted RBP18.21■□□□□ 0.51
ARHGEF40-205ENST00000555052 TROAPQ12815 778 aa18.21■□□□□ 0.51
ARHGEF40-205ENST00000555052 PGM5Q15124 567 aa18.21■□□□□ 0.51
ARHGEF40-205ENST00000555052 MYSM1Q5VVJ2 828 aa18.21■□□□□ 0.51
ARHGEF40-205ENST00000555052 ASB2Q96Q27 587 aa18.21■□□□□ 0.51
ARHGEF40-205ENST00000555052 PIGSQ96S52 555 aa18.21■□□□□ 0.51
ARHGEF40-205ENST00000555052 KATNAL1Q9BW62 490 aa18.21■□□□□ 0.51
ARHGEF40-205ENST00000555052 EPOPA6NHQ4 379 aa18.2■□□□□ 0.5
ARHGEF40-205ENST00000555052 IFIT3O14879 490 aaKnown RBP18.2■□□□□ 0.5
ARHGEF40-205ENST00000555052 CXCL10P02778 98 aa18.2■□□□□ 0.5
ARHGEF40-205ENST00000555052 CKBP12277 381 aa18.2■□□□□ 0.5
ARHGEF40-205ENST00000555052 TAP1Q03518 808 aa18.2■□□□□ 0.5
ARHGEF40-205ENST00000555052 MFSD10Q14728 455 aa18.2■□□□□ 0.5
ARHGEF40-205ENST00000555052 KIAA0753Q2KHM9 967 aa18.2■□□□□ 0.5
ARHGEF40-205ENST00000555052 TRIM71Q2Q1W2 868 aaKnown RBP18.2■□□□□ 0.5
ARHGEF40-205ENST00000555052 CELF3Q5SZQ8 465 aaKnown RBP18.2■□□□□ 0.5
ARHGEF40-205ENST00000555052 KCNV1Q6PIU1 500 aa18.2■□□□□ 0.5
ARHGEF40-205ENST00000555052 TRAF7Q6Q0C0 670 aa18.2■□□□□ 0.5
ARHGEF40-205ENST00000555052 LRRC8DQ7L1W4 858 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms