RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 SNAI1O95863 264 aaPredicted RBP11.61□□□□□ -0.55
SYNE2-215ENST00000554997 F13A1P00488 732 aa11.61□□□□□ -0.55
SYNE2-215ENST00000554997 MYCLP12524 364 aaPredicted RBP11.61□□□□□ -0.55
SYNE2-215ENST00000554997 TOB1P50616 345 aaPredicted RBP11.61□□□□□ -0.55
SYNE2-215ENST00000554997 UBXN2AP68543 259 aa11.61□□□□□ -0.55
SYNE2-215ENST00000554997 MRPS9P82933 396 aaKnown RBP11.61□□□□□ -0.55
SYNE2-215ENST00000554997 PDE4DQ08499 809 aa11.61□□□□□ -0.55
SYNE2-215ENST00000554997 CCL14Q16627 93 aa11.61□□□□□ -0.55
SYNE2-215ENST00000554997 PPP4R3AQ6IN85 833 aa11.61□□□□□ -0.55
SYNE2-215ENST00000554997 MOXD1Q6UVY6 613 aa11.61□□□□□ -0.55
SYNE2-215ENST00000554997 RAET1EQ8TD07 263 aa11.61□□□□□ -0.55
SYNE2-215ENST00000554997 RTEL1Q9NZ71 1219 aa11.61□□□□□ -0.55
SYNE2-215ENST00000554997 NOL7Q9UMY1 257 aaKnown RBP11.61□□□□□ -0.55
SYNE2-215ENST00000554997 PTPN22Q9Y2R2 807 aa11.61□□□□□ -0.55
SYNE2-215ENST00000554997 UBIAD1Q9Y5Z9 338 aa11.61□□□□□ -0.55
SYNE2-215ENST00000554997 ITGB5P18084 799 aa11.6□□□□□ -0.55
SYNE2-215ENST00000554997 ZNF76P36508 570 aa11.6□□□□□ -0.55
SYNE2-215ENST00000554997 PKN2Q16513 984 aaKnown RBP11.6□□□□□ -0.55
SYNE2-215ENST00000554997 LETM2Q2VYF4 491 aa11.6□□□□□ -0.55
SYNE2-215ENST00000554997 Q4G0T1 1027 aa11.6□□□□□ -0.55
SYNE2-215ENST00000554997 CEP55Q53EZ4 464 aa11.6□□□□□ -0.55
SYNE2-215ENST00000554997 FOXD4L5Q5VV16 416 aaPredicted RBP11.6□□□□□ -0.55
SYNE2-215ENST00000554997 MYSM1Q5VVJ2 828 aa11.6□□□□□ -0.55
SYNE2-215ENST00000554997 ARMCX2Q7L311 632 aa11.6□□□□□ -0.55
SYNE2-215ENST00000554997 NIPA1Q7RTP0 329 aa11.6□□□□□ -0.55
SYNE2-215ENST00000554997 CTU1Q7Z7A3 348 aaKnown RBP11.6□□□□□ -0.55
SYNE2-215ENST00000554997 NLRX1Q86UT6 975 aa11.6□□□□□ -0.55
SYNE2-215ENST00000554997 IL31RAQ8NI17 732 aa11.6□□□□□ -0.55
SYNE2-215ENST00000554997 FOXD4L4Q8WXT5 416 aaPredicted RBP11.6□□□□□ -0.55
SYNE2-215ENST00000554997 MBOAT7Q96N66 472 aa11.6□□□□□ -0.55
SYNE2-215ENST00000554997 MXRA8Q9BRK3 442 aa11.6□□□□□ -0.55
SYNE2-215ENST00000554997 ABHD16BQ9H3Z7 469 aa11.6□□□□□ -0.55
SYNE2-215ENST00000554997 JADE2Q9NQC1 790 aa11.6□□□□□ -0.55
SYNE2-215ENST00000554997 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.6□□□□□ -0.55
SYNE2-215ENST00000554997 NRBP1Q9UHY1 535 aa11.6□□□□□ -0.55
SYNE2-215ENST00000554997 ATP6V1DQ9Y5K8 247 aa11.6□□□□□ -0.55
SYNE2-215ENST00000554997 RBM47A0AV96 593 aaKnown RBP11.59□□□□□ -0.55
SYNE2-215ENST00000554997 SPATA31C2B4DYI2 1134 aa11.59□□□□□ -0.55
SYNE2-215ENST00000554997 FAM86B1E9PN63 330 aa11.59□□□□□ -0.55
SYNE2-215ENST00000554997 CCNT1O60563 726 aaKnown RBP11.59□□□□□ -0.55
SYNE2-215ENST00000554997 RGS20O76081 388 aa11.59□□□□□ -0.55
SYNE2-215ENST00000554997 FAM86B2P0C5J1 330 aa11.59□□□□□ -0.55
SYNE2-215ENST00000554997 TGFB3P10600 412 aa11.59□□□□□ -0.55
SYNE2-215ENST00000554997 GCFC2P16383 781 aaKnown RBP11.59□□□□□ -0.55
SYNE2-215ENST00000554997 ORC2Q13416 577 aaPredicted RBP11.59□□□□□ -0.55
SYNE2-215ENST00000554997 ACVR2BQ13705 512 aa11.59□□□□□ -0.55
SYNE2-215ENST00000554997 MFSD14CQ5VZR4 134 aa11.59□□□□□ -0.55
SYNE2-215ENST00000554997 ATL3Q6DD88 541 aa11.59□□□□□ -0.55
SYNE2-215ENST00000554997 TAPT1Q6NXT6 567 aa11.59□□□□□ -0.55
SYNE2-215ENST00000554997 KCNV1Q6PIU1 500 aa11.59□□□□□ -0.55
SYNE2-215ENST00000554997 CYP2W1Q8TAV3 490 aa11.59□□□□□ -0.55
SYNE2-215ENST00000554997 TRIB2Q92519 343 aa11.59□□□□□ -0.55
SYNE2-215ENST00000554997 ZFP91Q96JP5 570 aaPredicted RBP11.59□□□□□ -0.55
SYNE2-215ENST00000554997 INPP4AQ96PE3 977 aaPredicted RBP11.59□□□□□ -0.55
SYNE2-215ENST00000554997 VTA1Q9NP79 307 aa11.59□□□□□ -0.55
SYNE2-215ENST00000554997 PRDM10Q9NQV6 1147 aa11.59□□□□□ -0.55
SYNE2-215ENST00000554997 CNPY2Q9Y2B0 182 aa11.59□□□□□ -0.55
SYNE2-215ENST00000554997 DDX49Q9Y6V7 483 aaKnown RBP11.59□□□□□ -0.55
SYNE2-215ENST00000554997 IGLV3-22A0A075B6J6 115 aa11.58□□□□□ -0.56
SYNE2-215ENST00000554997 ATP2B1P20020 1258 aa11.58□□□□□ -0.56
SYNE2-215ENST00000554997 GRK4P32298 578 aa11.58□□□□□ -0.56
SYNE2-215ENST00000554997 ICAM3P32942 547 aa11.58□□□□□ -0.56
SYNE2-215ENST00000554997 CYP2C19P33261 490 aa11.58□□□□□ -0.56
SYNE2-215ENST00000554997 ZNF174Q15697 407 aa11.58□□□□□ -0.56
SYNE2-215ENST00000554997 GNPTABQ3T906 1256 aa11.58□□□□□ -0.56
SYNE2-215ENST00000554997 PRR16Q569H4 304 aa11.58□□□□□ -0.56
SYNE2-215ENST00000554997 TTC38Q5R3I4 469 aa11.58□□□□□ -0.56
SYNE2-215ENST00000554997 IQSEC1Q6DN90 963 aa11.58□□□□□ -0.56
SYNE2-215ENST00000554997 FAM173BQ6P4H8 233 aa11.58□□□□□ -0.56
SYNE2-215ENST00000554997 EEPD1Q7L9B9 569 aa11.58□□□□□ -0.56
SYNE2-215ENST00000554997 SLAIN1Q8ND83 568 aa11.58□□□□□ -0.56
SYNE2-215ENST00000554997 GPRASP2Q96D09 838 aa11.58□□□□□ -0.56
SYNE2-215ENST00000554997 CDHR1Q96JP9 859 aa11.58□□□□□ -0.56
SYNE2-215ENST00000554997 ZNF396Q96N95 335 aaPredicted RBP11.58□□□□□ -0.56
SYNE2-215ENST00000554997 WDR11Q9BZH6 1224 aa11.58□□□□□ -0.56
SYNE2-215ENST00000554997 KATNBL1Q9H079 304 aa11.58□□□□□ -0.56
SYNE2-215ENST00000554997 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.58□□□□□ -0.56
SYNE2-215ENST00000554997 DDX25Q9UHL0 483 aaKnown RBP11.58□□□□□ -0.56
SYNE2-215ENST00000554997 PCDHB6Q9Y5E3 794 aa11.58□□□□□ -0.56
SYNE2-215ENST00000554997 MYH6P13533 1939 aa11.58□□□□□ -0.56
SYNE2-215ENST00000554997 WNT7AO00755 349 aa11.57□□□□□ -0.56
SYNE2-215ENST00000554997 TBX3O15119 743 aa11.57□□□□□ -0.56
SYNE2-215ENST00000554997 FIBPO43427 364 aa11.57□□□□□ -0.56
SYNE2-215ENST00000554997 TDP2O95551 362 aa11.57□□□□□ -0.56
SYNE2-215ENST00000554997 HMGCRP04035 888 aa11.57□□□□□ -0.56
SYNE2-215ENST00000554997 ZNF865P0CJ78 1059 aaPredicted RBP11.57□□□□□ -0.56
SYNE2-215ENST00000554997 ARP10275 920 aa11.57□□□□□ -0.56
SYNE2-215ENST00000554997 ELNP15502 786 aa11.57□□□□□ -0.56
SYNE2-215ENST00000554997 CACNB2Q08289 660 aaPredicted RBP11.57□□□□□ -0.56
SYNE2-215ENST00000554997 MTMR1Q13613 665 aa11.57□□□□□ -0.56
SYNE2-215ENST00000554997 PRAMEF19Q5SWL8 479 aa11.57□□□□□ -0.56
SYNE2-215ENST00000554997 SEPT14Q6ZU15 432 aa11.57□□□□□ -0.56
SYNE2-215ENST00000554997 PLA2G4DQ86XP0 818 aa11.57□□□□□ -0.56
SYNE2-215ENST00000554997 C4orf32Q8N8J7 132 aa11.57□□□□□ -0.56
SYNE2-215ENST00000554997 LENG9Q96B70 501 aa11.57□□□□□ -0.56
SYNE2-215ENST00000554997 KCNH7Q9NS40 1196 aa11.57□□□□□ -0.56
SYNE2-215ENST00000554997 CFAP45Q9UL16 551 aa11.57□□□□□ -0.56
SYNE2-215ENST00000554997 PTCH2Q9Y6C5 1203 aa11.57□□□□□ -0.56
SYNE2-215ENST00000554997 ZNF236Q9UL36 1845 aa11.57□□□□□ -0.56
SYNE2-215ENST00000554997 LAD1O00515 517 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms