RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 GRK2P25098 689 aa7.23□□□□□ -1.25
PSEN1-211ENST00000554995 GRK3P35626 688 aa7.23□□□□□ -1.25
PSEN1-211ENST00000554995 LAPTM5Q13571 262 aa7.23□□□□□ -1.25
PSEN1-211ENST00000554995 GAB4Q2WGN9 574 aa7.23□□□□□ -1.25
PSEN1-211ENST00000554995 ARTNQ5T4W7 220 aa7.23□□□□□ -1.25
PSEN1-211ENST00000554995 DUSP27Q5VZP5 1158 aa7.23□□□□□ -1.25
PSEN1-211ENST00000554995 RNF111Q6ZNA4 994 aa7.23□□□□□ -1.25
PSEN1-211ENST00000554995 PASD1Q8IV76 773 aa7.23□□□□□ -1.25
PSEN1-211ENST00000554995 SPACA3Q8IXA5 215 aa7.23□□□□□ -1.25
PSEN1-211ENST00000554995 HSPA12BQ96MM6 686 aa7.23□□□□□ -1.25
PSEN1-211ENST00000554995 RTFDC1Q9BY42 306 aaPredicted RBP7.23□□□□□ -1.25
PSEN1-211ENST00000554995 CDH19Q9H159 772 aa7.23□□□□□ -1.25
PSEN1-211ENST00000554995 SPTLC3Q9NUV7 552 aa7.23□□□□□ -1.25
PSEN1-211ENST00000554995 FBXL7Q9UJT9 491 aa7.23□□□□□ -1.25
PSEN1-211ENST00000554995 SPEF1Q9Y4P9 236 aa7.23□□□□□ -1.25
PSEN1-211ENST00000554995 TNKSO95271 1327 aa7.23□□□□□ -1.25
PSEN1-211ENST00000554995 E2F8A0AVK6 867 aa7.22□□□□□ -1.25
PSEN1-211ENST00000554995 PTPDC1A2A3K4 754 aa7.22□□□□□ -1.25
PSEN1-211ENST00000554995 K7ESF4 209 aa7.22□□□□□ -1.25
PSEN1-211ENST00000554995 KIF3BO15066 747 aa7.22□□□□□ -1.25
PSEN1-211ENST00000554995 MYO1BO43795 1136 aa7.22□□□□□ -1.25
PSEN1-211ENST00000554995 FBXO21O94952 628 aa7.22□□□□□ -1.25
PSEN1-211ENST00000554995 ST5P78524 1137 aa7.22□□□□□ -1.25
PSEN1-211ENST00000554995 OCRLQ01968 901 aa7.22□□□□□ -1.25
PSEN1-211ENST00000554995 C16orf59Q7L2K0 433 aa7.22□□□□□ -1.25
PSEN1-211ENST00000554995 THAP5Q7Z6K1 395 aa7.22□□□□□ -1.25
PSEN1-211ENST00000554995 C11orf74Q86VG3 221 aa7.22□□□□□ -1.25
PSEN1-211ENST00000554995 MYO1HQ8N1T3 1032 aa7.22□□□□□ -1.25
PSEN1-211ENST00000554995 CISD2Q8N5K1 135 aaKnown RBP7.22□□□□□ -1.25
PSEN1-211ENST00000554995 UBE2FQ969M7 185 aa7.22□□□□□ -1.25
PSEN1-211ENST00000554995 MENTQ9BUN1 341 aa7.22□□□□□ -1.25
PSEN1-211ENST00000554995 MKNK2Q9HBH9 465 aa7.22□□□□□ -1.25
PSEN1-211ENST00000554995 ZFP64Q9NPA5 681 aa7.22□□□□□ -1.25
PSEN1-211ENST00000554995 DUSP13Q9UII6 198 aa7.22□□□□□ -1.25
PSEN1-211ENST00000554995 CBLCQ9ULV8 474 aa7.22□□□□□ -1.25
PSEN1-211ENST00000554995 GSTA4O15217 222 aa7.21□□□□□ -1.26
PSEN1-211ENST00000554995 ULK1O75385 1050 aa7.21□□□□□ -1.26
PSEN1-211ENST00000554995 CEACAM5P06731 702 aa7.21□□□□□ -1.26
PSEN1-211ENST00000554995 LTKP29376 864 aa7.21□□□□□ -1.26
PSEN1-211ENST00000554995 CLCN7P51798 805 aa7.21□□□□□ -1.26
PSEN1-211ENST00000554995 KPNA1P52294 538 aaPredicted RBP7.21□□□□□ -1.26
PSEN1-211ENST00000554995 LSAMPQ13449 338 aa7.21□□□□□ -1.26
PSEN1-211ENST00000554995 ABCB5Q2M3G0 1257 aa7.21□□□□□ -1.26
PSEN1-211ENST00000554995 CREB3L3Q68CJ9 461 aa7.21□□□□□ -1.26
PSEN1-211ENST00000554995 RNF43Q68DV7 783 aa7.21□□□□□ -1.26
PSEN1-211ENST00000554995 ZPBP2Q6X784 338 aa7.21□□□□□ -1.26
PSEN1-211ENST00000554995 HDGFL2Q7Z4V5 671 aaPredicted RBP7.21□□□□□ -1.26
PSEN1-211ENST00000554995 CCAR1Q8IX12 1150 aaKnown RBP7.21□□□□□ -1.26
PSEN1-211ENST00000554995 CBARPQ8N350 705 aaPredicted RBP7.21□□□□□ -1.26
PSEN1-211ENST00000554995 NAT16Q8N8M0 369 aa7.21□□□□□ -1.26
PSEN1-211ENST00000554995 C2orf69Q8N8R5 385 aa7.21□□□□□ -1.26
PSEN1-211ENST00000554995 TP53INP1Q96A56 240 aa7.21□□□□□ -1.26
PSEN1-211ENST00000554995 CHAMP1Q96JM3 812 aa7.21□□□□□ -1.26
PSEN1-211ENST00000554995 KRTAP4-9Q9BYQ8 210 aa7.21□□□□□ -1.26
PSEN1-211ENST00000554995 CDIP1Q9H305 208 aa7.21□□□□□ -1.26
PSEN1-211ENST00000554995 VTA1Q9NP79 307 aa7.21□□□□□ -1.26
PSEN1-211ENST00000554995 H2AFY2Q9P0M6 372 aaPredicted RBP7.21□□□□□ -1.26
PSEN1-211ENST00000554995 PLAGL2Q9UPG8 496 aa7.21□□□□□ -1.26
PSEN1-211ENST00000554995 PCDHA11Q9Y5I1 949 aa7.21□□□□□ -1.26
PSEN1-211ENST00000554995 TIMM13Q9Y5L4 95 aaPredicted RBP7.21□□□□□ -1.26
PSEN1-211ENST00000554995 TMEM82A0PJX8 343 aa7.2□□□□□ -1.26
PSEN1-211ENST00000554995 C7orf72A4D263 438 aa7.2□□□□□ -1.26
PSEN1-211ENST00000554995 PEX14O75381 377 aa7.2□□□□□ -1.26
PSEN1-211ENST00000554995 TBC1D8O95759 1140 aa7.2□□□□□ -1.26
PSEN1-211ENST00000554995 YBX3P16989 372 aaKnown RBP eCLIP7.2□□□□□ -1.26
PSEN1-211ENST00000554995 ATF3P18847 181 aa7.2□□□□□ -1.26
PSEN1-211ENST00000554995 ENDOUP21128 410 aaKnown RBP7.2□□□□□ -1.26
PSEN1-211ENST00000554995 GNALP38405 381 aa7.2□□□□□ -1.26
PSEN1-211ENST00000554995 BCL6P41182 706 aa7.2□□□□□ -1.26
PSEN1-211ENST00000554995 ERVK-21P61565 698 aa7.2□□□□□ -1.26
PSEN1-211ENST00000554995 RPL11P62913 178 aaKnown RBP7.2□□□□□ -1.26
PSEN1-211ENST00000554995 CYP2R1Q6VVX0 501 aa7.2□□□□□ -1.26
PSEN1-211ENST00000554995 PRR23CQ6ZRP0 262 aa7.2□□□□□ -1.26
PSEN1-211ENST00000554995 C14orf80Q86SX3 495 aa7.2□□□□□ -1.26
PSEN1-211ENST00000554995 SEMA3GQ9NS98 782 aa7.2□□□□□ -1.26
PSEN1-211ENST00000554995 CATSPERZQ9NTU4 200 aa7.2□□□□□ -1.26
PSEN1-211ENST00000554995 ZNF180Q9UJW8 692 aa7.2□□□□□ -1.26
PSEN1-211ENST00000554995 IARSP41252 1262 aaKnown RBP7.19□□□□□ -1.26
PSEN1-211ENST00000554995 GTF2A2P52657 109 aa7.19□□□□□ -1.26
PSEN1-211ENST00000554995 TEKQ02763 1124 aa7.19□□□□□ -1.26
PSEN1-211ENST00000554995 FAPQ12884 760 aa7.19□□□□□ -1.26
PSEN1-211ENST00000554995 CRY1Q16526 586 aa7.19□□□□□ -1.26
PSEN1-211ENST00000554995 PTPN21Q16825 1174 aa7.19□□□□□ -1.26
PSEN1-211ENST00000554995 OTOP1Q7RTM1 612 aa7.19□□□□□ -1.26
PSEN1-211ENST00000554995 NLRP10Q86W26 655 aa7.19□□□□□ -1.26
PSEN1-211ENST00000554995 CREG2Q8IUH2 290 aa7.19□□□□□ -1.26
PSEN1-211ENST00000554995 CLRN3Q8NCR9 226 aa7.19□□□□□ -1.26
PSEN1-211ENST00000554995 PANK1Q8TE04 598 aa7.19□□□□□ -1.26
PSEN1-211ENST00000554995 CAMKK2Q96RR4 588 aa7.19□□□□□ -1.26
PSEN1-211ENST00000554995 KCNJ15Q99712 375 aa7.19□□□□□ -1.26
PSEN1-211ENST00000554995 OXSMQ9NWU1 459 aa7.19□□□□□ -1.26
PSEN1-211ENST00000554995 ERVK13-1Q9NX77 482 aa7.19□□□□□ -1.26
PSEN1-211ENST00000554995 CLDND1Q9NY35 253 aa7.19□□□□□ -1.26
PSEN1-211ENST00000554995 NOB1Q9ULX3 412 aaKnown RBP7.19□□□□□ -1.26
PSEN1-211ENST00000554995 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.18□□□□□ -1.26
PSEN1-211ENST00000554995 NPHS1O60500 1241 aa7.18□□□□□ -1.26
PSEN1-211ENST00000554995 ABLIM3O94929 683 aa7.18□□□□□ -1.26
PSEN1-211ENST00000554995 MYBL2P10244 700 aa7.18□□□□□ -1.26
PSEN1-211ENST00000554995 LACTBP83111 547 aaPredicted RBP7.18□□□□□ -1.26
PSEN1-211ENST00000554995 DOC2BQ14184 412 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms