RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.73■□□□□ 0.59
SPTLC2-203ENST00000554901 FLRT1Q9NZU1 646 aa18.73■□□□□ 0.59
SPTLC2-203ENST00000554901 NOL7Q9UMY1 257 aaKnown RBP18.73■□□□□ 0.59
SPTLC2-203ENST00000554901 CNPY2Q9Y2B0 182 aa18.73■□□□□ 0.59
SPTLC2-203ENST00000554901 SNAI1O95863 264 aaPredicted RBP18.72■□□□□ 0.59
SPTLC2-203ENST00000554901 GCFC2P16383 781 aaKnown RBP18.72■□□□□ 0.59
SPTLC2-203ENST00000554901 GRK4P32298 578 aa18.72■□□□□ 0.59
SPTLC2-203ENST00000554901 INF2Q27J81 1249 aa18.72■□□□□ 0.59
SPTLC2-203ENST00000554901 GNPTABQ3T906 1256 aa18.72■□□□□ 0.59
SPTLC2-203ENST00000554901 FBXO46Q6PJ61 603 aaPredicted RBP18.72■□□□□ 0.59
SPTLC2-203ENST00000554901 NIPA1Q7RTP0 329 aa18.72■□□□□ 0.59
SPTLC2-203ENST00000554901 IL31RAQ8NI17 732 aa18.72■□□□□ 0.59
SPTLC2-203ENST00000554901 INPP4AQ96PE3 977 aaPredicted RBP18.72■□□□□ 0.59
SPTLC2-203ENST00000554901 PTCH2Q9Y6C5 1203 aa18.72■□□□□ 0.59
SPTLC2-203ENST00000554901 CYP3A7-CYP3A51PA0A087WV96 503 aa18.71■□□□□ 0.59
SPTLC2-203ENST00000554901 MAFGO15525 162 aa18.71■□□□□ 0.59
SPTLC2-203ENST00000554901 BRD1O95696 1058 aa18.71■□□□□ 0.59
SPTLC2-203ENST00000554901 MYCLP12524 364 aaPredicted RBP18.71■□□□□ 0.59
SPTLC2-203ENST00000554901 CYP3A7P24462 503 aa18.71■□□□□ 0.59
SPTLC2-203ENST00000554901 UBXN2AP68543 259 aa18.71■□□□□ 0.59
SPTLC2-203ENST00000554901 MRPS9P82933 396 aaKnown RBP18.71■□□□□ 0.59
SPTLC2-203ENST00000554901 RESTQ13127 1097 aa18.71■□□□□ 0.59
SPTLC2-203ENST00000554901 ORC2Q13416 577 aaPredicted RBP18.71■□□□□ 0.59
SPTLC2-203ENST00000554901 CEP55Q53EZ4 464 aa18.71■□□□□ 0.59
SPTLC2-203ENST00000554901 RILPL1Q5EBL4 403 aa18.71■□□□□ 0.59
SPTLC2-203ENST00000554901 EARS2Q5JPH6 523 aaKnown RBP18.71■□□□□ 0.59
SPTLC2-203ENST00000554901 PPP4R3AQ6IN85 833 aa18.71■□□□□ 0.59
SPTLC2-203ENST00000554901 UBIAD1Q9Y5Z9 338 aa18.71■□□□□ 0.59
SPTLC2-203ENST00000554901 ZNF76P36508 570 aa18.7■□□□□ 0.58
SPTLC2-203ENST00000554901 KCNV1Q6PIU1 500 aa18.7■□□□□ 0.58
SPTLC2-203ENST00000554901 NLRX1Q86UT6 975 aa18.7■□□□□ 0.58
SPTLC2-203ENST00000554901 GPRASP2Q96D09 838 aa18.7■□□□□ 0.58
SPTLC2-203ENST00000554901 CDHR1Q96JP9 859 aa18.7■□□□□ 0.58
SPTLC2-203ENST00000554901 MEIS1O00470 390 aa18.69■□□□□ 0.58
SPTLC2-203ENST00000554901 F13A1P00488 732 aa18.69■□□□□ 0.58
SPTLC2-203ENST00000554901 TGFB3P10600 412 aa18.69■□□□□ 0.58
SPTLC2-203ENST00000554901 ELNP15502 786 aa18.69■□□□□ 0.58
SPTLC2-203ENST00000554901 CYP2C19P33261 490 aa18.69■□□□□ 0.58
SPTLC2-203ENST00000554901 SETQ01105 290 aaPredicted RBP18.69■□□□□ 0.58
SPTLC2-203ENST00000554901 ACVR2BQ13705 512 aa18.69■□□□□ 0.58
SPTLC2-203ENST00000554901 MAP3K21Q5TCX8 1036 aa18.69■□□□□ 0.58
SPTLC2-203ENST00000554901 FERMT3Q86UX7 667 aa18.69■□□□□ 0.58
SPTLC2-203ENST00000554901 MBOAT7Q96N66 472 aa18.69■□□□□ 0.58
SPTLC2-203ENST00000554901 MXRA8Q9BRK3 442 aa18.69■□□□□ 0.58
SPTLC2-203ENST00000554901 KATNBL1Q9H079 304 aa18.69■□□□□ 0.58
SPTLC2-203ENST00000554901 RBM47A0AV96 593 aaKnown RBP18.69■□□□□ 0.58
SPTLC2-203ENST00000554901 FAM205CA6NFA0 338 aa18.69■□□□□ 0.58
SPTLC2-203ENST00000554901 ICAM3P32942 547 aa18.69■□□□□ 0.58
SPTLC2-203ENST00000554901 PKP1Q13835 747 aa18.69■□□□□ 0.58
SPTLC2-203ENST00000554901 LETM2Q2VYF4 491 aa18.69■□□□□ 0.58
SPTLC2-203ENST00000554901 MYSM1Q5VVJ2 828 aa18.69■□□□□ 0.58
SPTLC2-203ENST00000554901 SCFD2Q8WU76 684 aa18.69■□□□□ 0.58
SPTLC2-203ENST00000554901 JADE2Q9NQC1 790 aa18.69■□□□□ 0.58
SPTLC2-203ENST00000554901 LRRC37A2A6NM11 1700 aa18.68■□□□□ 0.58
SPTLC2-203ENST00000554901 MYH7BA7E2Y1 1941 aa18.68■□□□□ 0.58
SPTLC2-203ENST00000554901 FIBPO43427 364 aa18.68■□□□□ 0.58
SPTLC2-203ENST00000554901 EDIL3O43854 480 aa18.68■□□□□ 0.58
SPTLC2-203ENST00000554901 CYBAP13498 195 aa18.68■□□□□ 0.58
SPTLC2-203ENST00000554901 ITGB5P18084 799 aa18.68■□□□□ 0.58
SPTLC2-203ENST00000554901 SLC9C1Q4G0N8 1177 aa18.68■□□□□ 0.58
SPTLC2-203ENST00000554901 Q4G0T1 1027 aa18.68■□□□□ 0.58
SPTLC2-203ENST00000554901 ATP6V1DQ9Y5K8 247 aa18.68■□□□□ 0.58
SPTLC2-203ENST00000554901 IGLV3-22A0A075B6J6 115 aa18.67■□□□□ 0.58
SPTLC2-203ENST00000554901 FAM86B1E9PN63 330 aa18.67■□□□□ 0.58
SPTLC2-203ENST00000554901 RGS20O76081 388 aa18.67■□□□□ 0.58
SPTLC2-203ENST00000554901 FAM86B2P0C5J1 330 aa18.67■□□□□ 0.58
SPTLC2-203ENST00000554901 ZNF865P0CJ78 1059 aaPredicted RBP18.67■□□□□ 0.58
SPTLC2-203ENST00000554901 CACNB2Q08289 660 aaPredicted RBP18.67■□□□□ 0.58
SPTLC2-203ENST00000554901 MTMR1Q13613 665 aa18.67■□□□□ 0.58
SPTLC2-203ENST00000554901 TTC38Q5R3I4 469 aa18.67■□□□□ 0.58
SPTLC2-203ENST00000554901 IQSEC1Q6DN90 963 aa18.67■□□□□ 0.58
SPTLC2-203ENST00000554901 TAPT1Q6NXT6 567 aa18.67■□□□□ 0.58
SPTLC2-203ENST00000554901 FBXO16Q8IX29 292 aaPredicted RBP18.67■□□□□ 0.58
SPTLC2-203ENST00000554901 CHMP5Q9NZZ3 219 aa18.67■□□□□ 0.58
SPTLC2-203ENST00000554901 ZDHHC9Q9Y397 364 aa18.67■□□□□ 0.58
SPTLC2-203ENST00000554901 SPATA31C2B4DYI2 1134 aa18.66■□□□□ 0.58
SPTLC2-203ENST00000554901 CCNT1O60563 726 aaKnown RBP18.66■□□□□ 0.58
SPTLC2-203ENST00000554901 INHAP05111 366 aa18.66■□□□□ 0.58
SPTLC2-203ENST00000554901 PRKAR2AP13861 404 aaKnown RBP18.66■□□□□ 0.58
SPTLC2-203ENST00000554901 TTLL4Q14679 1199 aa18.66■□□□□ 0.58
SPTLC2-203ENST00000554901 ATL3Q6DD88 541 aa18.66■□□□□ 0.58
SPTLC2-203ENST00000554901 EEPD1Q7L9B9 569 aa18.66■□□□□ 0.58
SPTLC2-203ENST00000554901 SENP7Q9BQF6 1050 aa18.66■□□□□ 0.58
SPTLC2-203ENST00000554901 RTEL1Q9NZ71 1219 aa18.66■□□□□ 0.58
SPTLC2-203ENST00000554901 DDX25Q9UHL0 483 aaKnown RBP18.66■□□□□ 0.58
SPTLC2-203ENST00000554901 ZHX1Q9UKY1 873 aaPredicted RBP18.66■□□□□ 0.58
SPTLC2-203ENST00000554901 DDX49Q9Y6V7 483 aaKnown RBP18.66■□□□□ 0.58
SPTLC2-203ENST00000554901 MCM3APO60318 1980 aa18.65■□□□□ 0.58
SPTLC2-203ENST00000554901 TBX3O15119 743 aa18.65■□□□□ 0.58
SPTLC2-203ENST00000554901 TDP2O95551 362 aa18.65■□□□□ 0.58
SPTLC2-203ENST00000554901 BMP15O95972 392 aa18.65■□□□□ 0.58
SPTLC2-203ENST00000554901 TOB1P50616 345 aaPredicted RBP18.65■□□□□ 0.58
SPTLC2-203ENST00000554901 PRR16Q569H4 304 aa18.65■□□□□ 0.58
SPTLC2-203ENST00000554901 SEPT14Q6ZU15 432 aa18.65■□□□□ 0.58
SPTLC2-203ENST00000554901 PLA2G4DQ86XP0 818 aa18.65■□□□□ 0.58
SPTLC2-203ENST00000554901 GIMAP8Q8ND71 665 aaPredicted RBP18.65■□□□□ 0.58
SPTLC2-203ENST00000554901 LENG9Q96B70 501 aa18.65■□□□□ 0.58
SPTLC2-203ENST00000554901 WDR11Q9BZH6 1224 aa18.65■□□□□ 0.58
SPTLC2-203ENST00000554901 KCNH7Q9NS40 1196 aa18.65■□□□□ 0.58
SPTLC2-203ENST00000554901 FAM184BQ9ULE4 1060 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms