RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 KIZQ2M2Z5 673 aa6.03□□□□□ -1.44
SCFD1-214ENST00000554819 FOXB2Q5VYV0 432 aa6.03□□□□□ -1.44
SCFD1-214ENST00000554819 LILRB2Q8N423 598 aa6.03□□□□□ -1.44
SCFD1-214ENST00000554819 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.03□□□□□ -1.44
SCFD1-214ENST00000554819 SEC14L1Q92503 715 aa6.03□□□□□ -1.44
SCFD1-214ENST00000554819 TSPAN17Q96FV3 270 aa6.03□□□□□ -1.44
SCFD1-214ENST00000554819 EXOC2Q96KP1 924 aa6.03□□□□□ -1.44
SCFD1-214ENST00000554819 MRPS23Q9Y3D9 190 aaKnown RBP6.03□□□□□ -1.44
SCFD1-214ENST00000554819 BLACEA4D250 179 aa6.02□□□□□ -1.45
SCFD1-214ENST00000554819 N4BP3O15049 544 aa6.02□□□□□ -1.45
SCFD1-214ENST00000554819 FPR2P25090 351 aa6.02□□□□□ -1.45
SCFD1-214ENST00000554819 SLC6A11P48066 632 aa6.02□□□□□ -1.45
SCFD1-214ENST00000554819 GABREP78334 506 aa6.02□□□□□ -1.45
SCFD1-214ENST00000554819 TARBP2Q15633 366 aaKnown RBP6.02□□□□□ -1.45
SCFD1-214ENST00000554819 CHRNA2Q15822 529 aa6.02□□□□□ -1.45
SCFD1-214ENST00000554819 KCNT2Q6UVM3 1135 aa6.02□□□□□ -1.45
SCFD1-214ENST00000554819 LBX2Q6XYB7 198 aa6.02□□□□□ -1.45
SCFD1-214ENST00000554819 ATG14Q6ZNE5 492 aa6.02□□□□□ -1.45
SCFD1-214ENST00000554819 LDHDQ86WU2 507 aa6.02□□□□□ -1.45
SCFD1-214ENST00000554819 KRTAP19-1Q8IUB9 90 aa6.02□□□□□ -1.45
SCFD1-214ENST00000554819 KISS1RQ969F8 398 aaPredicted RBP6.02□□□□□ -1.45
SCFD1-214ENST00000554819 CNTD2Q9H8S5 307 aa6.02□□□□□ -1.45
SCFD1-214ENST00000554819 MSCO60682 206 aa6.01□□□□□ -1.45
SCFD1-214ENST00000554819 DGKIO75912 1065 aa6.01□□□□□ -1.45
SCFD1-214ENST00000554819 C1QTNF9P0C862 333 aa6.01□□□□□ -1.45
SCFD1-214ENST00000554819 PFKLP17858 780 aa6.01□□□□□ -1.45
SCFD1-214ENST00000554819 NLRP10Q86W26 655 aa6.01□□□□□ -1.45
SCFD1-214ENST00000554819 ANKLE2Q86XL3 938 aa6.01□□□□□ -1.45
SCFD1-214ENST00000554819 MZB1Q8WU39 189 aa6.01□□□□□ -1.45
SCFD1-214ENST00000554819 ALG1Q9BT22 464 aa6.01□□□□□ -1.45
SCFD1-214ENST00000554819 SGPP1Q9BX95 441 aa6.01□□□□□ -1.45
SCFD1-214ENST00000554819 EPB41L1Q9H4G0 881 aa6.01□□□□□ -1.45
SCFD1-214ENST00000554819 GCM1Q9NP62 436 aa6.01□□□□□ -1.45
SCFD1-214ENST00000554819 PTCH2Q9Y6C5 1203 aa6.01□□□□□ -1.45
SCFD1-214ENST00000554819 IRS2Q9Y4H2 1338 aa6□□□□□ -1.45
SCFD1-214ENST00000554819 MAFKO60675 156 aa6□□□□□ -1.45
SCFD1-214ENST00000554819 EFCAB14O75071 495 aa6□□□□□ -1.45
SCFD1-214ENST00000554819 KRT1P04264 644 aa6□□□□□ -1.45
SCFD1-214ENST00000554819 NCAM1P13591 858 aa6□□□□□ -1.45
SCFD1-214ENST00000554819 YBX3P16989 372 aaKnown RBP eCLIP6□□□□□ -1.45
SCFD1-214ENST00000554819 ZNF200P98182 395 aaPredicted RBP6□□□□□ -1.45
SCFD1-214ENST00000554819 ZNF124Q15973 351 aa6□□□□□ -1.45
SCFD1-214ENST00000554819 ALG3Q92685 438 aa6□□□□□ -1.45
SCFD1-214ENST00000554819 RNF38Q9H0F5 515 aa6□□□□□ -1.45
SCFD1-214ENST00000554819 PIF1Q9H611 641 aa6□□□□□ -1.45
SCFD1-214ENST00000554819 GOLGA2P5Q9HBQ8 144 aa6□□□□□ -1.45
SCFD1-214ENST00000554819 RXFP1Q9HBX9 757 aa6□□□□□ -1.45
SCFD1-214ENST00000554819 FBXL7Q9UJT9 491 aa6□□□□□ -1.45
SCFD1-214ENST00000554819 SMG5Q9UPR3 1016 aaKnown RBP6□□□□□ -1.45
SCFD1-214ENST00000554819 PCDHA5Q9Y5H7 936 aa6□□□□□ -1.45
SCFD1-214ENST00000554819 HCFC2Q9Y5Z7 792 aa6□□□□□ -1.45
SCFD1-214ENST00000554819 FAM47E-STBD1D6RA91 191 aa5.99□□□□□ -1.45
SCFD1-214ENST00000554819 KRIT1O00522 736 aa5.99□□□□□ -1.45
SCFD1-214ENST00000554819 HGSO14964 777 aaPredicted RBP5.99□□□□□ -1.45
SCFD1-214ENST00000554819 C6orf222P0C671 652 aaPredicted RBP5.99□□□□□ -1.45
SCFD1-214ENST00000554819 GRK2P25098 689 aa5.99□□□□□ -1.45
SCFD1-214ENST00000554819 GRK3P35626 688 aa5.99□□□□□ -1.45
SCFD1-214ENST00000554819 CDR1P51861 262 aa5.99□□□□□ -1.45
SCFD1-214ENST00000554819 MILR1Q7Z6M3 343 aa5.99□□□□□ -1.45
SCFD1-214ENST00000554819 MTDHQ86UE4 582 aaKnown RBP5.99□□□□□ -1.45
SCFD1-214ENST00000554819 SH3TC2Q8TF17 1288 aa5.99□□□□□ -1.45
SCFD1-214ENST00000554819 SIGLEC10Q96LC7 697 aa5.99□□□□□ -1.45
SCFD1-214ENST00000554819 CD320Q9NPF0 282 aa5.99□□□□□ -1.45
SCFD1-214ENST00000554819 SIT1Q9Y3P8 196 aa5.99□□□□□ -1.45
SCFD1-214ENST00000554819 TRAF6Q9Y4K3 522 aa5.99□□□□□ -1.45
SCFD1-214ENST00000554819 IRAK3Q9Y616 596 aa5.99□□□□□ -1.45
SCFD1-214ENST00000554819 ASXL2Q76L83 1435 aa5.99□□□□□ -1.45
SCFD1-214ENST00000554819 DBX1A6NMT0 343 aa5.98□□□□□ -1.45
SCFD1-214ENST00000554819 SGSM2O43147 1006 aa5.98□□□□□ -1.45
SCFD1-214ENST00000554819 BUB1BO60566 1050 aaPredicted RBP5.98□□□□□ -1.45
SCFD1-214ENST00000554819 SOD2P04179 222 aa5.98□□□□□ -1.45
SCFD1-214ENST00000554819 SPIRE1Q08AE8 756 aa5.98□□□□□ -1.45
SCFD1-214ENST00000554819 KCNA10Q16322 511 aa5.98□□□□□ -1.45
SCFD1-214ENST00000554819 ZNF385BQ569K4 471 aa5.98□□□□□ -1.45
SCFD1-214ENST00000554819 STEAP3Q658P3 488 aa5.98□□□□□ -1.45
SCFD1-214ENST00000554819 NOP9Q86U38 636 aaKnown RBP5.98□□□□□ -1.45
SCFD1-214ENST00000554819 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.98□□□□□ -1.45
SCFD1-214ENST00000554819 TOX2Q96NM4 488 aa5.98□□□□□ -1.45
SCFD1-214ENST00000554819 JAM3Q9BX67 310 aa5.98□□□□□ -1.45
SCFD1-214ENST00000554819 MRPL4Q9BYD3 311 aaKnown RBP5.98□□□□□ -1.45
SCFD1-214ENST00000554819 CDIP1Q9H305 208 aa5.98□□□□□ -1.45
SCFD1-214ENST00000554819 CNOT6Q9ULM6 557 aaKnown RBP5.98□□□□□ -1.45
SCFD1-214ENST00000554819 ZNF652Q9Y2D9 606 aa5.98□□□□□ -1.45
SCFD1-214ENST00000554819 NUB1Q9Y5A7 615 aa5.98□□□□□ -1.45
SCFD1-214ENST00000554819 RFXAPO00287 272 aa5.97□□□□□ -1.45
SCFD1-214ENST00000554819 TADA3O75528 432 aa5.97□□□□□ -1.45
SCFD1-214ENST00000554819 ASGR2P07307 311 aa5.97□□□□□ -1.45
SCFD1-214ENST00000554819 EPHB3P54753 998 aa5.97□□□□□ -1.45
SCFD1-214ENST00000554819 NCKAP1LP55160 1127 aa5.97□□□□□ -1.45
SCFD1-214ENST00000554819 GUCY1A3Q02108 690 aa5.97□□□□□ -1.45
SCFD1-214ENST00000554819 PAK1Q13153 545 aa5.97□□□□□ -1.45
SCFD1-214ENST00000554819 TRIM61Q5EBN2 209 aa5.97□□□□□ -1.45
SCFD1-214ENST00000554819 EMC4Q5J8M3 183 aa5.97□□□□□ -1.45
SCFD1-214ENST00000554819 CYP4F22Q6NT55 531 aa5.97□□□□□ -1.45
SCFD1-214ENST00000554819 AMIGO3Q86WK7 504 aa5.97□□□□□ -1.45
SCFD1-214ENST00000554819 IGDCC3Q8IVU1 814 aa5.97□□□□□ -1.45
SCFD1-214ENST00000554819 PHOSPHO1Q8TCT1 267 aa5.97□□□□□ -1.45
SCFD1-214ENST00000554819 CPA5Q8WXQ8 436 aa5.97□□□□□ -1.45
SCFD1-214ENST00000554819 SMOC1Q9H4F8 434 aa5.97□□□□□ -1.45
SCFD1-214ENST00000554819 SLC6A20Q9NP91 592 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms