RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 INPP5FQ9Y2H2 1132 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 PRKAB1Q9Y478 270 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 PTCH2Q9Y6C5 1203 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 PARP14Q460N5 1801 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 AK9Q5TCS8 1911 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 GAKO14976 1311 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 AOX1Q06278 1338 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 FANCIQ9NVI1 1328 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 A0A0G2JLL6 359 aaPredicted RBP3.12□□□□□ -1.91
PRPF39-206ENST00000554429 H0Y3Z8 333 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 GRM8O00222 908 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 APAF1O14727 1248 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 PRPF3O43395 683 aaKnown RBP3.12□□□□□ -1.91
PRPF39-206ENST00000554429 CIAO1O76071 339 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 RHOBTB3O94955 611 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 ITGB2P05107 769 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 CCDC172P0C7W6 258 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 HIBADHP31937 336 aaKnown RBP3.12□□□□□ -1.91
PRPF39-206ENST00000554429 SSTR3P32745 418 aaPredicted RBP3.12□□□□□ -1.91
PRPF39-206ENST00000554429 CRKP46108 304 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 NEK3P51956 506 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 ARID5AQ03989 594 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 KIF22Q14807 665 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 CWF19L2Q2TBE0 894 aaKnown RBP3.12□□□□□ -1.91
PRPF39-206ENST00000554429 APOBEC3HQ6NTF7 200 aaKnown RBP3.12□□□□□ -1.91
PRPF39-206ENST00000554429 UNC5DQ6UXZ4 953 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 G2E3Q7L622 706 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 PRRT2Q7Z6L0 340 aaPredicted RBP3.12□□□□□ -1.91
PRPF39-206ENST00000554429 CATIPQ7Z7H3 387 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 KIAA0825Q8IV33 1275 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 ELOA2Q8IYF1 753 aaPredicted RBP3.12□□□□□ -1.91
PRPF39-206ENST00000554429 SLC43A3Q8NBI5 491 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 LSM14AQ8ND56 463 aaKnown RBP3.12□□□□□ -1.91
PRPF39-206ENST00000554429 APPL2Q8NEU8 664 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 FRS2Q8WU20 508 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 KAZALD1Q96I82 304 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 PAWRQ96IZ0 340 aaKnown RBP3.12□□□□□ -1.91
PRPF39-206ENST00000554429 PHOX2BQ99453 314 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 HTATIP2Q9BUP3 242 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 IDI2Q9BXS1 227 aa3.12□□□□□ -1.91
PRPF39-206ENST00000554429 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.12□□□□□ -1.91
PRPF39-206ENST00000554429 PAK6Q9NQU5 681 aaPredicted RBP3.12□□□□□ -1.91
PRPF39-206ENST00000554429 NOB1Q9ULX3 412 aaKnown RBP3.12□□□□□ -1.91
PRPF39-206ENST00000554429 RLFQ13129 1914 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 PTPRCP08575 1304 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 CCL15-CCL14A0A0B4J2E2 113 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 A6NJY4 79 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 SPDYE16A6NNV3 312 aaPredicted RBP3.11□□□□□ -1.91
PRPF39-206ENST00000554429 BTBD19C9JJ37 291 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 ENPP3O14638 875 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 CTAGE5O15320 804 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 ENTPD3O75355 529 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 TPPPO94811 219 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 IGHA2P01877 340 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 HSD17B7P56937 341 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 DMTNQ08495 405 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 TTF1Q15361 905 aaPredicted RBP3.11□□□□□ -1.91
PRPF39-206ENST00000554429 NFE2Q16621 373 aaPredicted RBP3.11□□□□□ -1.91
PRPF39-206ENST00000554429 CCL15Q16663 113 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 SLC9C1Q4G0N8 1177 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 FAM83BQ5T0W9 1011 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 PRAMEF18Q5VWM3 479 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 PDXDC2PQ6P474 469 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 MAATS1Q7Z4T9 603 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 ANKRD44Q8N8A2 993 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 SKA1Q96BD8 255 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 SRPK1Q96SB4 655 aaKnown RBP3.11□□□□□ -1.91
PRPF39-206ENST00000554429 IWS1Q96ST2 819 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 ABCG4Q9H172 646 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 NUCKS1Q9H1E3 243 aaKnown RBP3.11□□□□□ -1.91
PRPF39-206ENST00000554429 COMMD8Q9NX08 183 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 CHCHD3Q9NX63 227 aaKnown RBP3.11□□□□□ -1.91
PRPF39-206ENST00000554429 NOVA2Q9UNW9 492 aaKnown RBP3.11□□□□□ -1.91
PRPF39-206ENST00000554429 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.11□□□□□ -1.91
PRPF39-206ENST00000554429 RRP15Q9Y3B9 282 aaKnown RBP3.11□□□□□ -1.91
PRPF39-206ENST00000554429 IKBKGQ9Y6K9 419 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 TSPY2A6NKD2 308 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 H0YGN5 161 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 SNX2O60749 519 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 P4HBP07237 508 aaKnown RBP3.11□□□□□ -1.91
PRPF39-206ENST00000554429 TSPY3P0CV98 308 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 TSPY8P0CW00 308 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 CTGFP29279 349 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 KCNJ4P48050 445 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 RFX5P48382 616 aaPredicted RBP3.11□□□□□ -1.91
PRPF39-206ENST00000554429 BPIFB3P59826 476 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 TSPY1Q01534 308 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 TAF1CQ15572 869 aaPredicted RBP3.11□□□□□ -1.91
PRPF39-206ENST00000554429 LRIT3Q3SXY7 679 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 MSS51Q4VC12 460 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 EPHA10Q5JZY3 1008 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 FASTKD5Q7L8L6 764 aaKnown RBP3.11□□□□□ -1.91
PRPF39-206ENST00000554429 SCUBE3Q8IX30 993 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 TRMT44Q8IYL2 757 aaKnown RBP3.11□□□□□ -1.91
PRPF39-206ENST00000554429 WDR66Q8TBY9 1149 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 NEK9Q8TD19 979 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 RNF34Q969K3 372 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 TEKT1Q969V4 418 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 HVCN1Q96D96 273 aa3.11□□□□□ -1.91
PRPF39-206ENST00000554429 ZFP42Q96MM3 310 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms