RNA–Protein interactions for RNA: ENST00000553938.5

SPTB-206, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 3,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-206ENST00000553938 RRAGAQ7L523 313 aa13.43□□□□□ -0.26
SPTB-206ENST00000553938 N4BP2L2Q92802 583 aaPredicted RBP13.43□□□□□ -0.26
SPTB-206ENST00000553938 CCDC51Q96ER9 411 aa13.43□□□□□ -0.26
SPTB-206ENST00000553938 PACSIN1Q9BY11 444 aa13.43□□□□□ -0.26
SPTB-206ENST00000553938 BLOC1S4Q9NUP1 217 aa13.43□□□□□ -0.26
SPTB-206ENST00000553938 IRAK4Q9NWZ3 460 aa13.43□□□□□ -0.26
SPTB-206ENST00000553938 PSMA7O14818 248 aa13.43□□□□□ -0.26
SPTB-206ENST00000553938 SKAP2O75563 359 aaPredicted RBP13.43□□□□□ -0.26
SPTB-206ENST00000553938 RASA1P20936 1047 aa13.43□□□□□ -0.26
SPTB-206ENST00000553938 SSR1P43307 286 aaKnown RBP13.43□□□□□ -0.26
SPTB-206ENST00000553938 PIP4K2BP78356 416 aa13.43□□□□□ -0.26
SPTB-206ENST00000553938 RASSF7Q02833 373 aa13.43□□□□□ -0.26
SPTB-206ENST00000553938 SAMM50Q9Y512 469 aa13.43□□□□□ -0.26
SPTB-206ENST00000553938 ROBO1Q9Y6N7 1651 aa13.43□□□□□ -0.26
SPTB-206ENST00000553938 SMCO2A6NFE2 343 aa13.43□□□□□ -0.26
SPTB-206ENST00000553938 ERLIN1O75477 346 aa13.43□□□□□ -0.26
SPTB-206ENST00000553938 MEA1Q16626 185 aa13.43□□□□□ -0.26
SPTB-206ENST00000553938 PAPD7Q5XG87 772 aaKnown RBP13.43□□□□□ -0.26
SPTB-206ENST00000553938 PSD3Q9NYI0 1048 aa13.43□□□□□ -0.26
SPTB-206ENST00000553938 FTCDO95954 541 aa13.42□□□□□ -0.26
SPTB-206ENST00000553938 CALM1P0DP23 149 aa13.42□□□□□ -0.26
SPTB-206ENST00000553938 CALM2P0DP24 149 aa13.42□□□□□ -0.26
SPTB-206ENST00000553938 CALM3P0DP25 149 aa13.42□□□□□ -0.26
SPTB-206ENST00000553938 GRB10Q13322 594 aa13.42□□□□□ -0.26
SPTB-206ENST00000553938 MXD3Q9BW11 206 aa13.42□□□□□ -0.26
SPTB-206ENST00000553938 HAUS4Q9H6D7 363 aa13.42□□□□□ -0.26
SPTB-206ENST00000553938 RBM12Q9NTZ6 932 aaKnown RBP13.42□□□□□ -0.26
SPTB-206ENST00000553938 BARHL2Q9NY43 387 aa13.42□□□□□ -0.26
SPTB-206ENST00000553938 KRT14P02533 472 aa13.42□□□□□ -0.26
SPTB-206ENST00000553938 WDR93Q6P2C0 686 aa13.42□□□□□ -0.26
SPTB-206ENST00000553938 NELFCDQ8IXH7 590 aa13.42□□□□□ -0.26
SPTB-206ENST00000553938 EXOC8Q8IYI6 725 aa13.42□□□□□ -0.26
SPTB-206ENST00000553938 CEP95Q96GE4 821 aa13.42□□□□□ -0.26
SPTB-206ENST00000553938 PNMA5Q96PV4 448 aa13.42□□□□□ -0.26
SPTB-206ENST00000553938 ANKIB1Q9P2G1 1089 aa13.42□□□□□ -0.26
SPTB-206ENST00000553938 MAGEC2Q9UBF1 373 aaPredicted RBP13.42□□□□□ -0.26
SPTB-206ENST00000553938 LAMB2P55268 1798 aa13.42□□□□□ -0.26
SPTB-206ENST00000553938 SLC16A2P36021 539 aa13.41□□□□□ -0.26
SPTB-206ENST00000553938 ATP1A2P50993 1020 aa13.41□□□□□ -0.26
SPTB-206ENST00000553938 STIM1Q13586 685 aa13.41□□□□□ -0.26
SPTB-206ENST00000553938 HSP90B2PQ58FF3 399 aa13.41□□□□□ -0.26
SPTB-206ENST00000553938 IFIH1Q9BYX4 1025 aaKnown RBP13.41□□□□□ -0.26
SPTB-206ENST00000553938 LRRC4CQ9HCJ2 640 aa13.41□□□□□ -0.26
SPTB-206ENST00000553938 F8W031 263 aaPredicted RBP13.41□□□□□ -0.26
SPTB-206ENST00000553938 KIF11P52732 1056 aa13.41□□□□□ -0.26
SPTB-206ENST00000553938 GRM4Q14833 912 aa13.41□□□□□ -0.26
SPTB-206ENST00000553938 FAM98CQ17RN3 349 aaKnown RBP13.41□□□□□ -0.26
SPTB-206ENST00000553938 NBPF5PQ86XG9 351 aaPredicted RBP13.41□□□□□ -0.26
SPTB-206ENST00000553938 CD248Q9HCU0 757 aa13.41□□□□□ -0.26
SPTB-206ENST00000553938 LAMB1P07942 1786 aa13.41□□□□□ -0.26
SPTB-206ENST00000553938 A0A087WUV0 522 aaPredicted RBP13.41□□□□□ -0.26
SPTB-206ENST00000553938 BMP15O95972 392 aa13.41□□□□□ -0.26
SPTB-206ENST00000553938 CALRP27797 417 aaKnown RBP13.41□□□□□ -0.26
SPTB-206ENST00000553938 TM4SF1P30408 202 aa13.41□□□□□ -0.26
SPTB-206ENST00000553938 SPAG1Q07617 926 aa13.41□□□□□ -0.26
SPTB-206ENST00000553938 ARL6IP4Q66PJ3 421 aaKnown RBP13.41□□□□□ -0.26
SPTB-206ENST00000553938 CCNI2Q6ZMN8 369 aaPredicted RBP13.41□□□□□ -0.26
SPTB-206ENST00000553938 MTA3Q9BTC8 594 aa13.41□□□□□ -0.26
SPTB-206ENST00000553938 SIK3Q9Y2K2 1263 aa13.41□□□□□ -0.26
SPTB-206ENST00000553938 TLR2O60603 784 aa13.4□□□□□ -0.26
SPTB-206ENST00000553938 SSBP05455 408 aaKnown RBP eCLIP13.4□□□□□ -0.26
SPTB-206ENST00000553938 OR52Z1P0C646 297 aa13.4□□□□□ -0.26
SPTB-206ENST00000553938 SNAP25P60880 206 aa13.4□□□□□ -0.26
SPTB-206ENST00000553938 SF3A3Q12874 501 aaKnown RBP eCLIP13.4□□□□□ -0.26
SPTB-206ENST00000553938 SF3B3Q15393 1217 aaKnown RBP13.4□□□□□ -0.26
SPTB-206ENST00000553938 TTBK2Q6IQ55 1244 aa13.4□□□□□ -0.26
SPTB-206ENST00000553938 FAM71BQ8TC56 605 aa13.4□□□□□ -0.26
SPTB-206ENST00000553938 THOC1Q96FV9 657 aaKnown RBP13.4□□□□□ -0.26
SPTB-206ENST00000553938 CCDC42Q96M95 316 aa13.4□□□□□ -0.26
SPTB-206ENST00000553938 RMND1Q9NWS8 449 aa13.4□□□□□ -0.26
SPTB-206ENST00000553938 PCDHA13Q9Y5I0 950 aa13.4□□□□□ -0.26
SPTB-206ENST00000553938 GLI1P08151 1106 aa13.4□□□□□ -0.26
SPTB-206ENST00000553938 CCNE1P24864 410 aa13.4□□□□□ -0.26
SPTB-206ENST00000553938 CCT5P48643 541 aa13.4□□□□□ -0.26
SPTB-206ENST00000553938 DNM2P50570 870 aa13.4□□□□□ -0.26
SPTB-206ENST00000553938 PICALMQ13492 652 aa13.4□□□□□ -0.26
SPTB-206ENST00000553938 TTMPQ5BVD1 217 aa13.4□□□□□ -0.26
SPTB-206ENST00000553938 THAP9Q9H5L6 903 aa13.4□□□□□ -0.26
SPTB-206ENST00000553938 GPCPD1Q9NPB8 672 aa13.4□□□□□ -0.26
SPTB-206ENST00000553938 SNED1Q8TER0 1413 aa13.4□□□□□ -0.26
SPTB-206ENST00000553938 FAM196BA6NMK8 535 aa13.4□□□□□ -0.26
SPTB-206ENST00000553938 BACH1O14867 736 aa13.4□□□□□ -0.26
SPTB-206ENST00000553938 EEF1GP26641 437 aaKnown RBP13.4□□□□□ -0.26
SPTB-206ENST00000553938 TRAPPC10P48553 1259 aa13.4□□□□□ -0.26
SPTB-206ENST00000553938 GUCY2FP51841 1108 aa13.4□□□□□ -0.26
SPTB-206ENST00000553938 AFAP1L1Q8TED9 768 aa13.4□□□□□ -0.26
SPTB-206ENST00000553938 ARPP21Q9UBL0 812 aaPredicted RBP13.4□□□□□ -0.26
SPTB-206ENST00000553938 BCS1LQ9Y276 419 aa13.4□□□□□ -0.26
SPTB-206ENST00000553938 EME2A4GXA9 379 aaPredicted RBP13.39□□□□□ -0.27
SPTB-206ENST00000553938 PALM3A6NDB9 673 aaPredicted RBP13.39□□□□□ -0.27
SPTB-206ENST00000553938 KRT86O43790 486 aa13.39□□□□□ -0.27
SPTB-206ENST00000553938 ELF1P32519 619 aa13.39□□□□□ -0.27
SPTB-206ENST00000553938 KIF5BP33176 963 aa13.39□□□□□ -0.27
SPTB-206ENST00000553938 KCNMA1Q12791 1236 aa13.39□□□□□ -0.27
SPTB-206ENST00000553938 PPP2R5BQ15173 497 aa13.39□□□□□ -0.27
SPTB-206ENST00000553938 NBPF9Q3BBW0 867 aa13.39□□□□□ -0.27
SPTB-206ENST00000553938 SPATA4Q8NEY3 305 aa13.39□□□□□ -0.27
SPTB-206ENST00000553938 TANGO6Q9C0B7 1094 aa13.39□□□□□ -0.27
SPTB-206ENST00000553938 ATP8A2Q9NTI2 1148 aa13.39□□□□□ -0.27
SPTB-206ENST00000553938 COL16A1Q07092 1604 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms