RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 CCDC83Q8IWF9 413 aa18.46■□□□□ 0.55
ACTN1-209ENST00000553659 VWCEQ96DN2 955 aa18.46■□□□□ 0.55
ACTN1-209ENST00000553659 SCLYQ96I15 445 aa18.46■□□□□ 0.55
ACTN1-209ENST00000553659 LLPHQ9BRT6 129 aaKnown RBP18.46■□□□□ 0.55
ACTN1-209ENST00000553659 GPHNQ9NQX3 736 aaPredicted RBP18.46■□□□□ 0.55
ACTN1-209ENST00000553659 TRMT13Q9NUP7 481 aaKnown RBP18.46■□□□□ 0.55
ACTN1-209ENST00000553659 KIF3AQ9Y496 699 aa18.46■□□□□ 0.55
ACTN1-209ENST00000553659 MYH6P13533 1939 aa18.45■□□□□ 0.54
ACTN1-209ENST00000553659 TNFRSF10AO00220 468 aa18.45■□□□□ 0.54
ACTN1-209ENST00000553659 NKRFO15226 690 aaKnown RBP eCLIP18.45■□□□□ 0.546e-6■■□□□ 11.7
ACTN1-209ENST00000553659 STX6O43752 255 aa18.45■□□□□ 0.54
ACTN1-209ENST00000553659 PFKMP08237 780 aa18.45■□□□□ 0.54
ACTN1-209ENST00000553659 MYL3P08590 195 aa18.45■□□□□ 0.54
ACTN1-209ENST00000553659 PCP11498 1178 aaKnown RBP18.45■□□□□ 0.54
ACTN1-209ENST00000553659 IGFBP4P22692 258 aa18.45■□□□□ 0.54
ACTN1-209ENST00000553659 RABGGTBP53611 331 aa18.45■□□□□ 0.54
ACTN1-209ENST00000553659 EXOSC10Q01780 885 aaKnown RBP18.45■□□□□ 0.54
ACTN1-209ENST00000553659 SLC30A10Q6XR72 485 aa18.45■□□□□ 0.54
ACTN1-209ENST00000553659 Q6ZUG5 572 aa18.45■□□□□ 0.54
ACTN1-209ENST00000553659 OR6J1Q8NGC5 347 aa18.45■□□□□ 0.54
ACTN1-209ENST00000553659 NCOA7Q8NI08 942 aa18.45■□□□□ 0.54
ACTN1-209ENST00000553659 MPHOSPH6Q99547 160 aaKnown RBP18.45■□□□□ 0.54
ACTN1-209ENST00000553659 MTG1Q9BT17 334 aaPredicted RBP18.45■□□□□ 0.54
ACTN1-209ENST00000553659 TNKSO95271 1327 aa18.45■□□□□ 0.54
ACTN1-209ENST00000553659 CYP2C9P11712 490 aa18.44■□□□□ 0.54
ACTN1-209ENST00000553659 GJB2P29033 226 aa18.44■□□□□ 0.54
ACTN1-209ENST00000553659 RPS6P62753 249 aaKnown RBP18.44■□□□□ 0.54
ACTN1-209ENST00000553659 PDE4DQ08499 809 aa18.44■□□□□ 0.54
ACTN1-209ENST00000553659 ZNF543Q08ER8 600 aa18.44■□□□□ 0.54
ACTN1-209ENST00000553659 TRDNQ13061 729 aa18.44■□□□□ 0.54
ACTN1-209ENST00000553659 CCDC85BQ15834 202 aaPredicted RBP18.44■□□□□ 0.54
ACTN1-209ENST00000553659 CSPP1Q1MSJ5 1256 aa18.44■□□□□ 0.54
ACTN1-209ENST00000553659 KLHL40Q2TBA0 621 aa18.44■□□□□ 0.54
ACTN1-209ENST00000553659 BRDTQ58F21 947 aaPredicted RBP18.44■□□□□ 0.54
ACTN1-209ENST00000553659 MFSD6Q6ZSS7 791 aa18.44■□□□□ 0.54
ACTN1-209ENST00000553659 RALYLQ86SE5 291 aaKnown RBP18.44■□□□□ 0.54
ACTN1-209ENST00000553659 DNERQ8NFT8 737 aa18.44■□□□□ 0.54
ACTN1-209ENST00000553659 ASB2Q96Q27 587 aa18.44■□□□□ 0.54
ACTN1-209ENST00000553659 THEGQ9P2T0 379 aa18.44■□□□□ 0.54
ACTN1-209ENST00000553659 PCDHA11Q9Y5I1 949 aa18.44■□□□□ 0.54
ACTN1-209ENST00000553659 KIAA1217Q5T5P2 1943 aa18.43■□□□□ 0.54
ACTN1-209ENST00000553659 ZBBXA8MT70 800 aa18.43■□□□□ 0.54
ACTN1-209ENST00000553659 B4DLN1 442 aa18.43■□□□□ 0.54
ACTN1-209ENST00000553659 KPNA6O60684 536 aa18.43■□□□□ 0.54
ACTN1-209ENST00000553659 LARGE1O95461 756 aa18.43■□□□□ 0.54
ACTN1-209ENST00000553659 SNHG28P0DPA3 235 aa18.43■□□□□ 0.54
ACTN1-209ENST00000553659 ZSCAN22P10073 491 aaPredicted RBP18.43■□□□□ 0.54
ACTN1-209ENST00000553659 EDNRBP24530 442 aa18.43■□□□□ 0.54
ACTN1-209ENST00000553659 MCM5P33992 734 aa18.43■□□□□ 0.54
ACTN1-209ENST00000553659 MRPL12P52815 198 aaKnown RBP18.43■□□□□ 0.54
ACTN1-209ENST00000553659 HAND2P61296 217 aa18.43■□□□□ 0.54
ACTN1-209ENST00000553659 PKP1Q13835 747 aa18.43■□□□□ 0.54
ACTN1-209ENST00000553659 PPP2R5BQ15173 497 aa18.43■□□□□ 0.54
ACTN1-209ENST00000553659 NBPF20Q3BBV1 942 aa18.43■□□□□ 0.54
ACTN1-209ENST00000553659 MCTP1Q6DN14 999 aa18.43■□□□□ 0.54
ACTN1-209ENST00000553659 STOX1Q6ZVD7 989 aa18.43■□□□□ 0.54
ACTN1-209ENST00000553659 SCFD2Q8WU76 684 aa18.43■□□□□ 0.54
ACTN1-209ENST00000553659 GTF3C6Q969F1 213 aa18.43■□□□□ 0.54
ACTN1-209ENST00000553659 A6NJR5 290 aa18.42■□□□□ 0.54
ACTN1-209ENST00000553659 PFKFB2O60825 505 aa18.42■□□□□ 0.54
ACTN1-209ENST00000553659 MBD3O95983 291 aa18.42■□□□□ 0.54
ACTN1-209ENST00000553659 MYOGP15173 224 aa18.42■□□□□ 0.54
ACTN1-209ENST00000553659 ATP2A2P16615 1042 aaKnown RBP18.42■□□□□ 0.54
ACTN1-209ENST00000553659 SYT1P21579 422 aa18.42■□□□□ 0.54
ACTN1-209ENST00000553659 MRPS5P82675 430 aaKnown RBP18.42■□□□□ 0.54
ACTN1-209ENST00000553659 HMGN5P82970 282 aaKnown RBP18.42■□□□□ 0.54
ACTN1-209ENST00000553659 TTLL4Q14679 1199 aa18.42■□□□□ 0.54
ACTN1-209ENST00000553659 L1TD1Q5T7N2 865 aaKnown RBP18.42■□□□□ 0.54
ACTN1-209ENST00000553659 PPP2R2DQ66LE6 453 aa18.42■□□□□ 0.54
ACTN1-209ENST00000553659 NFRKBQ6P4R8 1299 aa18.42■□□□□ 0.54
ACTN1-209ENST00000553659 RGS22Q8NE09 1264 aa18.42■□□□□ 0.54
ACTN1-209ENST00000553659 ZNF274Q96GC6 653 aaPredicted RBP18.42■□□□□ 0.54
ACTN1-209ENST00000553659 TAF6LQ9Y6J9 622 aa18.42■□□□□ 0.54
ACTN1-209ENST00000553659 TANC1Q9C0D5 1861 aa18.41■□□□□ 0.54
ACTN1-209ENST00000553659 TCF20Q9UGU0 1960 aaKnown RBP18.41■□□□□ 0.54
ACTN1-209ENST00000553659 TTC28Q96AY4 2481 aa18.41■□□□□ 0.54
ACTN1-209ENST00000553659 RFC2P35250 354 aa18.41■□□□□ 0.54
ACTN1-209ENST00000553659 PTPN11Q06124 597 aaPredicted RBP18.41■□□□□ 0.54
ACTN1-209ENST00000553659 FAM47CQ5HY64 1035 aa18.41■□□□□ 0.54
ACTN1-209ENST00000553659 GPATCH4Q5T3I0 446 aaKnown RBP18.41■□□□□ 0.54
ACTN1-209ENST00000553659 DEFB128Q7Z7B8 93 aa18.41■□□□□ 0.54
ACTN1-209ENST00000553659 RNF41Q9H4P4 317 aaPredicted RBP18.41■□□□□ 0.54
ACTN1-209ENST00000553659 TET1Q8NFU7 2136 aa18.41■□□□□ 0.54
ACTN1-209ENST00000553659 SPTBN5Q9NRC6 3674 aaKnown RBP18.4■□□□□ 0.54
ACTN1-209ENST00000553659 TXNP10599 105 aaKnown RBP18.4■□□□□ 0.54
ACTN1-209ENST00000553659 ACTN1P12814 892 aa18.4■□□□□ 0.54
ACTN1-209ENST00000553659 EVCP57679 992 aa18.4■□□□□ 0.54
ACTN1-209ENST00000553659 TMEM67Q5HYA8 995 aa18.4■□□□□ 0.54
ACTN1-209ENST00000553659 DGKHQ86XP1 1220 aa18.4■□□□□ 0.54
ACTN1-209ENST00000553659 TBC1D10CQ8IV04 446 aa18.4■□□□□ 0.54
ACTN1-209ENST00000553659 RETREG2Q8NC44 543 aa18.4■□□□□ 0.54
ACTN1-209ENST00000553659 COPS5Q92905 334 aa18.4■□□□□ 0.54
ACTN1-209ENST00000553659 BRF1Q92994 677 aa18.4■□□□□ 0.54
ACTN1-209ENST00000553659 MTA3Q9BTC8 594 aa18.4■□□□□ 0.54
ACTN1-209ENST00000553659 MAF1Q9H063 256 aa18.4■□□□□ 0.54
ACTN1-209ENST00000553659 CNNM2Q9H8M5 875 aa18.4■□□□□ 0.54
ACTN1-209ENST00000553659 MYH7BA7E2Y1 1941 aa18.4■□□□□ 0.54
ACTN1-209ENST00000553659 CHD9Q3L8U1 2897 aa18.4■□□□□ 0.54
ACTN1-209ENST00000553659 PITPNM1O00562 1244 aa18.39■□□□□ 0.53
ACTN1-209ENST00000553659 DHX16O60231 1041 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms