RNA–Protein interactions for RNA: ENST00000553651.1

CHD8-205, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-205ENST00000553651 M0R2C6 588 aa11.4□□□□□ -0.58
CHD8-205ENST00000553651 NMT2O60551 498 aa11.4□□□□□ -0.58
CHD8-205ENST00000553651 RAB11FIP3O75154 756 aa11.4□□□□□ -0.58
CHD8-205ENST00000553651 LGR5O75473 907 aa11.4□□□□□ -0.58
CHD8-205ENST00000553651 LINC00271P0C7V0 271 aa11.4□□□□□ -0.58
CHD8-205ENST00000553651 TXNP10599 105 aaKnown RBP11.4□□□□□ -0.58
CHD8-205ENST00000553651 DLX2Q07687 328 aaPredicted RBP11.4□□□□□ -0.58
CHD8-205ENST00000553651 ARHGAP1Q07960 439 aa11.4□□□□□ -0.58
CHD8-205ENST00000553651 HIC1Q14526 733 aa11.4□□□□□ -0.58
CHD8-205ENST00000553651 SMAD2Q15796 467 aaKnown RBP11.4□□□□□ -0.58
CHD8-205ENST00000553651 ZNF618Q5T7W0 954 aa11.4□□□□□ -0.58
CHD8-205ENST00000553651 RNF135Q8IUD6 432 aa11.4□□□□□ -0.58
CHD8-205ENST00000553651 APPBP2Q92624 585 aa11.4□□□□□ -0.58
CHD8-205ENST00000553651 ZNF287Q9HBT7 754 aa11.4□□□□□ -0.58
CHD8-205ENST00000553651 HDAC6Q9UBN7 1215 aa11.4□□□□□ -0.58
CHD8-205ENST00000553651 CTNNA3Q9UI47 895 aa11.4□□□□□ -0.58
CHD8-205ENST00000553651 ISY1Q9ULR0 285 aaKnown RBP11.4□□□□□ -0.58
CHD8-205ENST00000553651 PTPDC1A2A3K4 754 aa11.39□□□□□ -0.59
CHD8-205ENST00000553651 HAS3O00219 553 aa11.39□□□□□ -0.59
CHD8-205ENST00000553651 FOXP2O15409 715 aa11.39□□□□□ -0.59
CHD8-205ENST00000553651 MBTPS2O43462 519 aa11.39□□□□□ -0.59
CHD8-205ENST00000553651 CALML3P27482 149 aa11.39□□□□□ -0.59
CHD8-205ENST00000553651 SLC16A2P36021 539 aa11.39□□□□□ -0.59
CHD8-205ENST00000553651 TDO2P48775 406 aa11.39□□□□□ -0.59
CHD8-205ENST00000553651 PTPN5P54829 565 aa11.39□□□□□ -0.59
CHD8-205ENST00000553651 RPS6P62753 249 aaKnown RBP11.39□□□□□ -0.59
CHD8-205ENST00000553651 PDE4DQ08499 809 aa11.39□□□□□ -0.59
CHD8-205ENST00000553651 PTK7Q13308 1070 aa11.39□□□□□ -0.59
CHD8-205ENST00000553651 GPM6BQ13491 265 aa11.39□□□□□ -0.59
CHD8-205ENST00000553651 PTPROQ16827 1216 aa11.39□□□□□ -0.59
CHD8-205ENST00000553651 RPAINQ86UA6 219 aa11.39□□□□□ -0.59
CHD8-205ENST00000553651 IFNL3Q8IZI9 196 aa11.39□□□□□ -0.59
CHD8-205ENST00000553651 KBTBD3Q8NAB2 608 aa11.39□□□□□ -0.59
CHD8-205ENST00000553651 DBF4BQ8NFT6 615 aa11.39□□□□□ -0.59
CHD8-205ENST00000553651 DNERQ8NFT8 737 aa11.39□□□□□ -0.59
CHD8-205ENST00000553651 PANK1Q8TE04 598 aa11.39□□□□□ -0.59
CHD8-205ENST00000553651 EDAQ92838 391 aa11.39□□□□□ -0.59
CHD8-205ENST00000553651 SAMD11Q96NU1 681 aa11.39□□□□□ -0.59
CHD8-205ENST00000553651 OSBPL7Q9BZF2 842 aa11.39□□□□□ -0.59
CHD8-205ENST00000553651 UPF3BQ9BZI7 483 aaKnown RBP11.39□□□□□ -0.59
CHD8-205ENST00000553651 BCL11AQ9H165 835 aa11.39□□□□□ -0.59
CHD8-205ENST00000553651 NSUN3Q9H649 340 aaKnown RBP11.39□□□□□ -0.59
CHD8-205ENST00000553651 INCENPQ9NQS7 918 aa11.39□□□□□ -0.59
CHD8-205ENST00000553651 FAM50BQ9Y247 325 aa11.39□□□□□ -0.59
CHD8-205ENST00000553651 PLXNA3P51805 1871 aa11.38□□□□□ -0.59
CHD8-205ENST00000553651 RALGAPA2Q2PPJ7 1873 aa11.38□□□□□ -0.59
CHD8-205ENST00000553651 PATL2C9JE40 543 aaKnown RBP11.38□□□□□ -0.59
CHD8-205ENST00000553651 RNF113AO15541 343 aaKnown RBP11.38□□□□□ -0.59
CHD8-205ENST00000553651 CHMP4BP1P59074 171 aa11.38□□□□□ -0.59
CHD8-205ENST00000553651 ZNF200P98182 395 aaPredicted RBP11.38□□□□□ -0.59
CHD8-205ENST00000553651 SYDE2Q5VT97 1194 aa11.38□□□□□ -0.59
CHD8-205ENST00000553651 RNF207Q6ZRF8 634 aa11.38□□□□□ -0.59
CHD8-205ENST00000553651 TMEM192Q8IY95 271 aa11.38□□□□□ -0.59
CHD8-205ENST00000553651 CRBNQ96SW2 442 aa11.38□□□□□ -0.59
CHD8-205ENST00000553651 CLDND1Q9NY35 253 aa11.38□□□□□ -0.59
CHD8-205ENST00000553651 VPS13AQ96RL7 3174 aa11.38□□□□□ -0.59
CHD8-205ENST00000553651 FAM186AA6NE01 2351 aa11.38□□□□□ -0.59
CHD8-205ENST00000553651 KIAA1217Q5T5P2 1943 aa11.37□□□□□ -0.59
CHD8-205ENST00000553651 WDR87Q6ZQQ6 2873 aa11.37□□□□□ -0.59
CHD8-205ENST00000553651 TMEM221A6NGB7 291 aa11.37□□□□□ -0.59
CHD8-205ENST00000553651 M0R296 226 aa11.37□□□□□ -0.59
CHD8-205ENST00000553651 TBX10O75333 385 aa11.37□□□□□ -0.59
CHD8-205ENST00000553651 F2P00734 622 aa11.37□□□□□ -0.59
CHD8-205ENST00000553651 GNAT2P19087 354 aa11.37□□□□□ -0.59
CHD8-205ENST00000553651 PDE4BQ07343 736 aa11.37□□□□□ -0.59
CHD8-205ENST00000553651 PPARAQ07869 468 aa11.37□□□□□ -0.59
CHD8-205ENST00000553651 HYAL1Q12794 435 aa11.37□□□□□ -0.59
CHD8-205ENST00000553651 LY6KQ17RY6 165 aa11.37□□□□□ -0.59
CHD8-205ENST00000553651 PLEKHG4Q58EX7 1191 aa11.37□□□□□ -0.59
CHD8-205ENST00000553651 TRIM67Q6ZTA4 783 aa11.37□□□□□ -0.59
CHD8-205ENST00000553651 FBXO11Q86XK2 927 aa11.37□□□□□ -0.59
CHD8-205ENST00000553651 MYOCDQ8IZQ8 938 aa11.37□□□□□ -0.59
CHD8-205ENST00000553651 DCAF4Q8WV16 495 aa11.37□□□□□ -0.59
CHD8-205ENST00000553651 TOP1MTQ969P6 601 aa11.37□□□□□ -0.59
CHD8-205ENST00000553651 SEC62Q99442 399 aaKnown RBP11.37□□□□□ -0.59
CHD8-205ENST00000553651 STX8Q9UNK0 236 aa11.37□□□□□ -0.59
CHD8-205ENST00000553651 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.36□□□□□ -0.59
CHD8-205ENST00000553651 C5orf67F2Z3F1 127 aa11.36□□□□□ -0.59
CHD8-205ENST00000553651 GFRA3O60609 400 aa11.36□□□□□ -0.59
CHD8-205ENST00000553651 GH1P01241 217 aa11.36□□□□□ -0.59
CHD8-205ENST00000553651 AMHP03971 560 aa11.36□□□□□ -0.59
CHD8-205ENST00000553651 HOXD8P13378 290 aaPredicted RBP11.36□□□□□ -0.59
CHD8-205ENST00000553651 GTF2F1P35269 517 aaKnown RBP eCLIP11.36□□□□□ -0.59
CHD8-205ENST00000553651 PSEN2P49810 448 aa11.36□□□□□ -0.59
CHD8-205ENST00000553651 FOXK2Q01167 660 aa11.36□□□□□ -0.59
CHD8-205ENST00000553651 CLUL1Q15846 466 aa11.36□□□□□ -0.59
CHD8-205ENST00000553651 EP400NLQ6ZTU2 488 aa11.36□□□□□ -0.59
CHD8-205ENST00000553651 EMID1Q96A84 441 aaPredicted RBP11.36□□□□□ -0.59
CHD8-205ENST00000553651 POP1Q99575 1024 aaKnown RBP11.36□□□□□ -0.59
CHD8-205ENST00000553651 ZBTB40Q9NUA8 1239 aa11.36□□□□□ -0.59
CHD8-205ENST00000553651 FAM86C1Q9NVL1 165 aa11.36□□□□□ -0.59
CHD8-205ENST00000553651 MYO15AQ9UKN7 3530 aa11.36□□□□□ -0.59
CHD8-205ENST00000553651 GVINP1Q7Z2Y8 2422 aa11.36□□□□□ -0.59
CHD8-205ENST00000553651 WDR19Q8NEZ3 1342 aa11.35□□□□□ -0.59
CHD8-205ENST00000553651 NCK2O43639 380 aa11.35□□□□□ -0.59
CHD8-205ENST00000553651 SMARCA5O60264 1052 aaPredicted RBP11.35□□□□□ -0.59
CHD8-205ENST00000553651 HMMRO75330 724 aa11.35□□□□□ -0.59
CHD8-205ENST00000553651 APPP05067 770 aa11.35□□□□□ -0.59
CHD8-205ENST00000553651 CASTP20810 708 aaKnown RBP11.35□□□□□ -0.59
CHD8-205ENST00000553651 HOXC8P31273 242 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms