RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 CCDC178Q5BJE1 867 aa11.6□□□□□ -0.55
ACTN1-208ENST00000553370 GPATCH4Q5T3I0 446 aaKnown RBP11.6□□□□□ -0.55
ACTN1-208ENST00000553370 BTNL9Q6UXG8 535 aa11.6□□□□□ -0.55
ACTN1-208ENST00000553370 ZNF589Q86UQ0 364 aaPredicted RBP11.6□□□□□ -0.55
ACTN1-208ENST00000553370 CCDC155Q8N6L0 562 aa11.6□□□□□ -0.55
ACTN1-208ENST00000553370 USP38Q8NB14 1042 aa11.6□□□□□ -0.55
ACTN1-208ENST00000553370 SLC43A3Q8NBI5 491 aa11.6□□□□□ -0.55
ACTN1-208ENST00000553370 ZKSCAN3Q9BRR0 538 aa11.6□□□□□ -0.55
ACTN1-208ENST00000553370 TCP11L1Q9NUJ3 509 aa11.6□□□□□ -0.55
ACTN1-208ENST00000553370 CXXC1Q9P0U4 656 aaPredicted RBP11.6□□□□□ -0.55
ACTN1-208ENST00000553370 WDR19Q8NEZ3 1342 aa11.6□□□□□ -0.55
ACTN1-208ENST00000553370 SALL3Q9BXA9 1300 aa11.6□□□□□ -0.55
ACTN1-208ENST00000553370 DOCK5Q9H7D0 1870 aa11.59□□□□□ -0.55
ACTN1-208ENST00000553370 PTPRSQ13332 1948 aa11.59□□□□□ -0.55
ACTN1-208ENST00000553370 KPNA6O60684 536 aa11.59□□□□□ -0.55
ACTN1-208ENST00000553370 TXNP10599 105 aaKnown RBP11.59□□□□□ -0.55
ACTN1-208ENST00000553370 RABGGTBP53611 331 aa11.59□□□□□ -0.55
ACTN1-208ENST00000553370 RPS6P62753 249 aaKnown RBP11.59□□□□□ -0.55
ACTN1-208ENST00000553370 PURAQ00577 322 aaKnown RBP11.59□□□□□ -0.55
ACTN1-208ENST00000553370 HDAC1Q13547 482 aaPredicted RBP11.59□□□□□ -0.55
ACTN1-208ENST00000553370 CDC37Q16543 378 aaPredicted RBP11.59□□□□□ -0.55
ACTN1-208ENST00000553370 RASIP1Q5U651 963 aa11.59□□□□□ -0.55
ACTN1-208ENST00000553370 TICAM2Q86XR7 235 aa11.59□□□□□ -0.55
ACTN1-208ENST00000553370 TBC1D10CQ8IV04 446 aa11.59□□□□□ -0.55
ACTN1-208ENST00000553370 PDCD7Q8N8D1 485 aaKnown RBP11.59□□□□□ -0.55
ACTN1-208ENST00000553370 DNERQ8NFT8 737 aa11.59□□□□□ -0.55
ACTN1-208ENST00000553370 MORC4Q8TE76 937 aa11.59□□□□□ -0.55
ACTN1-208ENST00000553370 YTHDC1Q96MU7 727 aaKnown RBP11.59□□□□□ -0.55
ACTN1-208ENST00000553370 TTC14Q96N46 770 aa11.59□□□□□ -0.55
ACTN1-208ENST00000553370 UBAC1Q9BSL1 405 aa11.59□□□□□ -0.55
ACTN1-208ENST00000553370 WNT8AQ9H1J5 351 aa11.59□□□□□ -0.55
ACTN1-208ENST00000553370 RWDD1Q9H446 243 aaPredicted RBP11.59□□□□□ -0.55
ACTN1-208ENST00000553370 REV3LO60673 3130 aa11.59□□□□□ -0.55
ACTN1-208ENST00000553370 NEDD4P46934 1319 aa11.59□□□□□ -0.55
ACTN1-208ENST00000553370 COL4A4P53420 1690 aaPredicted RBP11.59□□□□□ -0.55
ACTN1-208ENST00000553370 GRXCR2A6NFK2 248 aa11.58□□□□□ -0.56
ACTN1-208ENST00000553370 HIP1O00291 1037 aa11.58□□□□□ -0.56
ACTN1-208ENST00000553370 GPR37O15354 613 aa11.58□□□□□ -0.56
ACTN1-208ENST00000553370 KCNJ6P48051 423 aa11.58□□□□□ -0.56
ACTN1-208ENST00000553370 BFSP2Q13515 415 aa11.58□□□□□ -0.56
ACTN1-208ENST00000553370 NBPF20Q3BBV1 942 aa11.58□□□□□ -0.56
ACTN1-208ENST00000553370 TMEM63BQ5T3F8 832 aa11.58□□□□□ -0.56
ACTN1-208ENST00000553370 CWC27Q6UX04 472 aaKnown RBP11.58□□□□□ -0.56
ACTN1-208ENST00000553370 CHST3Q7LGC8 479 aa11.58□□□□□ -0.56
ACTN1-208ENST00000553370 PNMA1Q8ND90 353 aa11.58□□□□□ -0.56
ACTN1-208ENST00000553370 BOLA1Q9Y3E2 137 aa11.58□□□□□ -0.56
ACTN1-208ENST00000553370 PCDHA11Q9Y5I1 949 aa11.58□□□□□ -0.56
ACTN1-208ENST00000553370 GRIN2DO15399 1336 aa11.58□□□□□ -0.56
ACTN1-208ENST00000553370 ABCB11O95342 1321 aa11.58□□□□□ -0.56
ACTN1-208ENST00000553370 MICAL3Q7RTP6 2002 aa11.57□□□□□ -0.56
ACTN1-208ENST00000553370 C2orf72A6NCS6 295 aa11.57□□□□□ -0.56
ACTN1-208ENST00000553370 KIF28PB7ZC32 967 aa11.57□□□□□ -0.56
ACTN1-208ENST00000553370 TNFRSF10AO00220 468 aa11.57□□□□□ -0.56
ACTN1-208ENST00000553370 KDM4AO75164 1064 aa11.57□□□□□ -0.56
ACTN1-208ENST00000553370 FGRP09769 529 aa11.57□□□□□ -0.56
ACTN1-208ENST00000553370 SDSP20132 328 aa11.57□□□□□ -0.56
ACTN1-208ENST00000553370 RFC2P35250 354 aa11.57□□□□□ -0.56
ACTN1-208ENST00000553370 MRPS5P82675 430 aaKnown RBP11.57□□□□□ -0.56
ACTN1-208ENST00000553370 IMMTQ16891 758 aaKnown RBP11.57□□□□□ -0.56
ACTN1-208ENST00000553370 ASPRV1Q53RT3 343 aa11.57□□□□□ -0.56
ACTN1-208ENST00000553370 TMEM67Q5HYA8 995 aa11.57□□□□□ -0.56
ACTN1-208ENST00000553370 NFRKBQ6P4R8 1299 aa11.57□□□□□ -0.56
ACTN1-208ENST00000553370 SEPT14Q6ZU15 432 aa11.57□□□□□ -0.56
ACTN1-208ENST00000553370 MCF2L2Q86YR7 1114 aa11.57□□□□□ -0.56
ACTN1-208ENST00000553370 PPP1R13LQ8WUF5 828 aa11.57□□□□□ -0.56
ACTN1-208ENST00000553370 CLEC4DQ8WXI8 215 aa11.57□□□□□ -0.56
ACTN1-208ENST00000553370 COPS5Q92905 334 aa11.57□□□□□ -0.56
ACTN1-208ENST00000553370 UBA5Q9GZZ9 404 aa11.57□□□□□ -0.56
ACTN1-208ENST00000553370 PRDM6Q9NQX0 595 aa11.57□□□□□ -0.56
ACTN1-208ENST00000553370 YBX2Q9Y2T7 364 aaKnown RBP11.57□□□□□ -0.56
ACTN1-208ENST00000553370 SIP14410 1827 aa11.57□□□□□ -0.56
ACTN1-208ENST00000553370 SPTBN5Q9NRC6 3674 aaKnown RBP11.56□□□□□ -0.56
ACTN1-208ENST00000553370 GH1P01241 217 aa11.56□□□□□ -0.56
ACTN1-208ENST00000553370 PARP1P09874 1014 aaKnown RBP11.56□□□□□ -0.56
ACTN1-208ENST00000553370 NOVP48745 357 aa11.56□□□□□ -0.56
ACTN1-208ENST00000553370 NT5C2P49902 561 aa11.56□□□□□ -0.56
ACTN1-208ENST00000553370 PTGISQ16647 500 aa11.56□□□□□ -0.56
ACTN1-208ENST00000553370 ARHGEF16Q5VV41 709 aa11.56□□□□□ -0.56
ACTN1-208ENST00000553370 FBXO11Q86XK2 927 aa11.56□□□□□ -0.56
ACTN1-208ENST00000553370 DGKHQ86XP1 1220 aa11.56□□□□□ -0.56
ACTN1-208ENST00000553370 NSUN6Q8TEA1 469 aaKnown RBP11.56□□□□□ -0.56
ACTN1-208ENST00000553370 ATXN2LQ8WWM7 1075 aaKnown RBP11.56□□□□□ -0.56
ACTN1-208ENST00000553370 SLC9A7Q96T83 725 aa11.56□□□□□ -0.56
ACTN1-208ENST00000553370 TMEM121BQ9BXQ6 578 aaPredicted RBP11.56□□□□□ -0.56
ACTN1-208ENST00000553370 KRT23Q9C075 422 aa11.56□□□□□ -0.56
ACTN1-208ENST00000553370 CPVLQ9H3G5 476 aa11.56□□□□□ -0.56
ACTN1-208ENST00000553370 CNNM2Q9H8M5 875 aa11.56□□□□□ -0.56
ACTN1-208ENST00000553370 VAT1LQ9HCJ6 419 aa11.56□□□□□ -0.56
ACTN1-208ENST00000553370 CTNNA3Q9UI47 895 aa11.56□□□□□ -0.56
ACTN1-208ENST00000553370 MRPL11Q9Y3B7 192 aaKnown RBP11.56□□□□□ -0.56
ACTN1-208ENST00000553370 NLRC5Q86WI3 1866 aa11.55□□□□□ -0.56
ACTN1-208ENST00000553370 RBM47A0AV96 593 aaKnown RBP11.55□□□□□ -0.56
ACTN1-208ENST00000553370 B4E1Z4 1266 aa11.55□□□□□ -0.56
ACTN1-208ENST00000553370 CA3P07451 260 aa11.55□□□□□ -0.56
ACTN1-208ENST00000553370 MYOGP15173 224 aa11.55□□□□□ -0.56
ACTN1-208ENST00000553370 EIF2AK2P19525 551 aaKnown RBP11.55□□□□□ -0.56
ACTN1-208ENST00000553370 PTPN11Q06124 597 aaPredicted RBP11.55□□□□□ -0.56
ACTN1-208ENST00000553370 AAMPQ13685 434 aa11.55□□□□□ -0.56
ACTN1-208ENST00000553370 STXBP2Q15833 593 aa11.55□□□□□ -0.56
ACTN1-208ENST00000553370 IFIT1BQ5T764 474 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms