RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 PCDH19Q8TAB3 1148 aa6.81□□□□□ -1.32
SCFD1-209ENST00000553280 DIO2Q92813 273 aa6.81□□□□□ -1.32
SCFD1-209ENST00000553280 MMP19Q99542 508 aa6.81□□□□□ -1.32
SCFD1-209ENST00000553280 CHMP4AQ9BY43 222 aa6.81□□□□□ -1.32
SCFD1-209ENST00000553280 CLEC1BQ9P126 229 aa6.81□□□□□ -1.32
SCFD1-209ENST00000553280 TRBV23OR9-2A0A075B6M9 112 aa6.8□□□□□ -1.32
SCFD1-209ENST00000553280 WNT9AO14904 365 aa6.8□□□□□ -1.32
SCFD1-209ENST00000553280 GLRX3O76003 335 aaKnown RBP6.8□□□□□ -1.32
SCFD1-209ENST00000553280 CKMP06732 381 aa6.8□□□□□ -1.32
SCFD1-209ENST00000553280 GSTM1P09488 218 aa6.8□□□□□ -1.32
SCFD1-209ENST00000553280 YBX3P16989 372 aaKnown RBP eCLIP6.8□□□□□ -1.32
SCFD1-209ENST00000553280 MCL1Q07820 350 aa6.8□□□□□ -1.32
SCFD1-209ENST00000553280 ITKQ08881 620 aa6.8□□□□□ -1.32
SCFD1-209ENST00000553280 KSR1Q8IVT5 923 aa6.8□□□□□ -1.32
SCFD1-209ENST00000553280 ZC3H7AQ8IWR0 971 aaKnown RBP6.8□□□□□ -1.32
SCFD1-209ENST00000553280 UBE2FQ969M7 185 aa6.8□□□□□ -1.32
SCFD1-209ENST00000553280 C8orf48Q96LL4 319 aa6.8□□□□□ -1.32
SCFD1-209ENST00000553280 ALG1Q9BT22 464 aa6.8□□□□□ -1.32
SCFD1-209ENST00000553280 SLC52A1Q9NWF4 448 aa6.8□□□□□ -1.32
SCFD1-209ENST00000553280 ZSWIM5Q9P217 1185 aa6.8□□□□□ -1.32
SCFD1-209ENST00000553280 APOBEC2Q9Y235 224 aaKnown RBP6.8□□□□□ -1.32
SCFD1-209ENST00000553280 TRAF5O00463 557 aa6.79□□□□□ -1.32
SCFD1-209ENST00000553280 LCP1P13796 627 aa6.79□□□□□ -1.32
SCFD1-209ENST00000553280 PAMP19021 973 aa6.79□□□□□ -1.32
SCFD1-209ENST00000553280 ID4P47928 161 aa6.79□□□□□ -1.32
SCFD1-209ENST00000553280 NEK2P51955 445 aa6.79□□□□□ -1.32
SCFD1-209ENST00000553280 PCBP3P57721 371 aaKnown RBP6.79□□□□□ -1.32
SCFD1-209ENST00000553280 DSG1Q02413 1049 aa6.79□□□□□ -1.32
SCFD1-209ENST00000553280 SART3Q15020 963 aaKnown RBP6.79□□□□□ -1.32
SCFD1-209ENST00000553280 SKOR2Q2VWA4 1001 aaPredicted RBP6.79□□□□□ -1.32
SCFD1-209ENST00000553280 NXPE1Q8N323 547 aa6.79□□□□□ -1.32
SCFD1-209ENST00000553280 RCBTB1Q8NDN9 531 aa6.79□□□□□ -1.32
SCFD1-209ENST00000553280 CELF4Q9BZC1 486 aaKnown RBP6.79□□□□□ -1.32
SCFD1-209ENST00000553280 TRIM8Q9BZR9 551 aa6.79□□□□□ -1.32
SCFD1-209ENST00000553280 CCDC8Q9H0W5 538 aaPredicted RBP6.79□□□□□ -1.32
SCFD1-209ENST00000553280 NPHP3-ACAD11A0A0J9YXS1 232 aa6.78□□□□□ -1.32
SCFD1-209ENST00000553280 ZNF891A8MT65 544 aaPredicted RBP6.78□□□□□ -1.32
SCFD1-209ENST00000553280 WASH4PA8MWX3 477 aa6.78□□□□□ -1.32
SCFD1-209ENST00000553280 M0R2C6 588 aa6.78□□□□□ -1.32
SCFD1-209ENST00000553280 TSPAN6O43657 245 aa6.78□□□□□ -1.32
SCFD1-209ENST00000553280 SYPP08247 313 aa6.78□□□□□ -1.32
SCFD1-209ENST00000553280 PYGMP11217 842 aa6.78□□□□□ -1.32
SCFD1-209ENST00000553280 TMPRSS15P98073 1019 aa6.78□□□□□ -1.32
SCFD1-209ENST00000553280 KIZQ2M2Z5 673 aa6.78□□□□□ -1.32
SCFD1-209ENST00000553280 GAB4Q2WGN9 574 aa6.78□□□□□ -1.32
SCFD1-209ENST00000553280 ZNF648Q5T619 568 aaPredicted RBP6.78□□□□□ -1.32
SCFD1-209ENST00000553280 RNF111Q6ZNA4 994 aa6.78□□□□□ -1.32
SCFD1-209ENST00000553280 SMC1BQ8NDV3 1235 aa6.78□□□□□ -1.32
SCFD1-209ENST00000553280 FLAD1Q8NFF5 587 aa6.78□□□□□ -1.32
SCFD1-209ENST00000553280 TSR2Q969E8 191 aaKnown RBP6.78□□□□□ -1.32
SCFD1-209ENST00000553280 RELTQ969Z4 430 aa6.78□□□□□ -1.32
SCFD1-209ENST00000553280 MTMR8Q96EF0 704 aa6.78□□□□□ -1.32
SCFD1-209ENST00000553280 LMCD1Q9NZU5 365 aa6.78□□□□□ -1.32
SCFD1-209ENST00000553280 B4GALT6Q9UBX8 382 aa6.78□□□□□ -1.32
SCFD1-209ENST00000553280 TCFL5Q9UL49 500 aa6.78□□□□□ -1.32
SCFD1-209ENST00000553280 CTNND2Q9UQB3 1225 aa6.78□□□□□ -1.32
SCFD1-209ENST00000553280 SPEF1Q9Y4P9 236 aa6.78□□□□□ -1.32
SCFD1-209ENST00000553280 SSU72P8A0A1W2PR75 194 aa6.77□□□□□ -1.33
SCFD1-209ENST00000553280 GSTA4O15217 222 aa6.77□□□□□ -1.33
SCFD1-209ENST00000553280 FGF10O15520 208 aaPredicted RBP6.77□□□□□ -1.33
SCFD1-209ENST00000553280 FKBP9O95302 570 aa6.77□□□□□ -1.33
SCFD1-209ENST00000553280 C8AP07357 584 aa6.77□□□□□ -1.33
SCFD1-209ENST00000553280 SRGAP2CP0DJJ0 459 aa6.77□□□□□ -1.33
SCFD1-209ENST00000553280 ENDOUP21128 410 aaKnown RBP6.77□□□□□ -1.33
SCFD1-209ENST00000553280 TPP2P29144 1249 aaPredicted RBP6.77□□□□□ -1.33
SCFD1-209ENST00000553280 ADCYAP1R1P41586 468 aa6.77□□□□□ -1.33
SCFD1-209ENST00000553280 RAB27AP51159 221 aa6.77□□□□□ -1.33
SCFD1-209ENST00000553280 MECP2P51608 486 aaKnown RBP6.77□□□□□ -1.33
SCFD1-209ENST00000553280 PPP2R5AQ15172 486 aa6.77□□□□□ -1.33
SCFD1-209ENST00000553280 INF2Q27J81 1249 aa6.77□□□□□ -1.33
SCFD1-209ENST00000553280 TMEM177Q53S58 311 aa6.77□□□□□ -1.33
SCFD1-209ENST00000553280 FKBP9P1Q75LS8 142 aa6.77□□□□□ -1.33
SCFD1-209ENST00000553280 THAP5Q7Z6K1 395 aa6.77□□□□□ -1.33
SCFD1-209ENST00000553280 POU5F2Q8N7G0 328 aa6.77□□□□□ -1.33
SCFD1-209ENST00000553280 CNTD1Q8N815 330 aa6.77□□□□□ -1.33
SCFD1-209ENST00000553280 CCDC136Q96JN2 1154 aa6.77□□□□□ -1.33
SCFD1-209ENST00000553280 PTCHD1Q96NR3 888 aa6.77□□□□□ -1.33
SCFD1-209ENST00000553280 CABP5Q9NP86 173 aa6.77□□□□□ -1.33
SCFD1-209ENST00000553280 CRTAC1Q9NQ79 661 aa6.77□□□□□ -1.33
SCFD1-209ENST00000553280 ZKSCAN5Q9Y2L8 839 aa6.77□□□□□ -1.33
SCFD1-209ENST00000553280 COQ6Q9Y2Z9 468 aa6.77□□□□□ -1.33
SCFD1-209ENST00000553280 AKAP10O43572 662 aa6.76□□□□□ -1.33
SCFD1-209ENST00000553280 GAS7O60861 476 aa6.76□□□□□ -1.33
SCFD1-209ENST00000553280 SOD2P04179 222 aa6.76□□□□□ -1.33
SCFD1-209ENST00000553280 IL2P60568 153 aa6.76□□□□□ -1.33
SCFD1-209ENST00000553280 KCNMB1Q16558 191 aa6.76□□□□□ -1.33
SCFD1-209ENST00000553280 FAM47CQ5HY64 1035 aa6.76□□□□□ -1.33
SCFD1-209ENST00000553280 SYDE2Q5VT97 1194 aa6.76□□□□□ -1.33
SCFD1-209ENST00000553280 FYB2Q5VWT5 728 aa6.76□□□□□ -1.33
SCFD1-209ENST00000553280 C16orf59Q7L2K0 433 aa6.76□□□□□ -1.33
SCFD1-209ENST00000553280 OVCH1Q7RTY7 1134 aa6.76□□□□□ -1.33
SCFD1-209ENST00000553280 ZSWIM9Q86XI8 627 aa6.76□□□□□ -1.33
SCFD1-209ENST00000553280 CHST14Q8NCH0 376 aa6.76□□□□□ -1.33
SCFD1-209ENST00000553280 COG1Q8WTW3 980 aa6.76□□□□□ -1.33
SCFD1-209ENST00000553280 FBXW5Q969U6 566 aa6.76□□□□□ -1.33
SCFD1-209ENST00000553280 CHMP4CQ96CF2 233 aa6.76□□□□□ -1.33
SCFD1-209ENST00000553280 MENTQ9BUN1 341 aa6.76□□□□□ -1.33
SCFD1-209ENST00000553280 FOXP3Q9BZS1 431 aa6.76□□□□□ -1.33
SCFD1-209ENST00000553280 AP5S1Q9NUS5 200 aa6.76□□□□□ -1.33
SCFD1-209ENST00000553280 TRHDEQ9UKU6 1024 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms