RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.28■□□□□ 0.04
VPS29-211ENST00000553128 FOXP2O15409 715 aa15.27■□□□□ 0.04
VPS29-211ENST00000553128 ZNF200P98182 395 aaPredicted RBP15.27■□□□□ 0.04
VPS29-211ENST00000553128 ARHGAP1Q07960 439 aa15.27■□□□□ 0.04
VPS29-211ENST00000553128 IKBKEQ14164 716 aa15.27■□□□□ 0.04
VPS29-211ENST00000553128 HIC1Q14526 733 aa15.27■□□□□ 0.04
VPS29-211ENST00000553128 EPC2Q52LR7 807 aa15.27■□□□□ 0.04
VPS29-211ENST00000553128 ZNF618Q5T7W0 954 aa15.27■□□□□ 0.04
VPS29-211ENST00000553128 BTNL9Q6UXG8 535 aa15.27■□□□□ 0.04
VPS29-211ENST00000553128 CHST3Q7LGC8 479 aa15.27■□□□□ 0.04
VPS29-211ENST00000553128 BANK1Q8NDB2 785 aa15.27■□□□□ 0.04
VPS29-211ENST00000553128 PRSS33Q8NF86 280 aa15.27■□□□□ 0.04
VPS29-211ENST00000553128 LRRCC1Q9C099 1032 aa15.27■□□□□ 0.04
VPS29-211ENST00000553128 GPCPD1Q9NPB8 672 aa15.27■□□□□ 0.04
VPS29-211ENST00000553128 GTF2IRD1Q9UHL9 959 aa15.27■□□□□ 0.04
VPS29-211ENST00000553128 INSL6Q9Y581 213 aa15.27■□□□□ 0.04
VPS29-211ENST00000553128 TSPY2A6NKD2 308 aa15.26■□□□□ 0.03
VPS29-211ENST00000553128 LTBRP36941 435 aa15.26■□□□□ 0.03
VPS29-211ENST00000553128 NOVP48745 357 aa15.26■□□□□ 0.03
VPS29-211ENST00000553128 HTRA4P83105 476 aaPredicted RBP15.26■□□□□ 0.03
VPS29-211ENST00000553128 COL19A1Q14993 1142 aa15.26■□□□□ 0.03
VPS29-211ENST00000553128 IER5LQ5T953 404 aa15.26■□□□□ 0.03
VPS29-211ENST00000553128 ADHFE1Q8IWW8 467 aa15.26■□□□□ 0.03
VPS29-211ENST00000553128 MYOCDQ8IZQ8 938 aa15.26■□□□□ 0.03
VPS29-211ENST00000553128 SP7Q8TDD2 431 aaPredicted RBP15.26■□□□□ 0.03
VPS29-211ENST00000553128 DCAF4Q8WV16 495 aa15.26■□□□□ 0.03
VPS29-211ENST00000553128 PABPC5Q96DU9 382 aaKnown RBP15.26■□□□□ 0.03
VPS29-211ENST00000553128 ALG1Q9BT22 464 aa15.26■□□□□ 0.03
VPS29-211ENST00000553128 NAPBQ9H115 298 aa15.26■□□□□ 0.03
VPS29-211ENST00000553128 MUTYHQ9UIF7 546 aa15.26■□□□□ 0.03
VPS29-211ENST00000553128 DMDP11532 3685 aa15.25■□□□□ 0.03
VPS29-211ENST00000553128 CLUL1Q15846 466 aa15.25■□□□□ 0.03
VPS29-211ENST00000553128 SEPT14Q6ZU15 432 aa15.25■□□□□ 0.03
VPS29-211ENST00000553128 DBF4BQ8NFT6 615 aa15.25■□□□□ 0.03
VPS29-211ENST00000553128 DNERQ8NFT8 737 aa15.25■□□□□ 0.03
VPS29-211ENST00000553128 OSBPL7Q9BZF2 842 aa15.25■□□□□ 0.03
VPS29-211ENST00000553128 CLDND1Q9NY35 253 aa15.25■□□□□ 0.03
VPS29-211ENST00000553128 PRKAG3Q9UGI9 489 aa15.25■□□□□ 0.03
VPS29-211ENST00000553128 H3BNC9 293 aa15.24■□□□□ 0.03
VPS29-211ENST00000553128 EFCAB14O75071 495 aa15.24■□□□□ 0.03
VPS29-211ENST00000553128 LGR5O75473 907 aa15.24■□□□□ 0.03
VPS29-211ENST00000553128 PARNO95453 639 aaKnown RBP15.24■□□□□ 0.03
VPS29-211ENST00000553128 SLC3A2P08195 630 aaKnown RBP15.24■□□□□ 0.03
VPS29-211ENST00000553128 ZNF286BP0CG31 522 aa15.24■□□□□ 0.03
VPS29-211ENST00000553128 PSEN2P49810 448 aa15.24■□□□□ 0.03
VPS29-211ENST00000553128 DLX2Q07687 328 aaPredicted RBP15.24■□□□□ 0.03
VPS29-211ENST00000553128 GPM6BQ13491 265 aa15.24■□□□□ 0.03
VPS29-211ENST00000553128 PTPROQ16827 1216 aa15.24■□□□□ 0.03
VPS29-211ENST00000553128 TIGD5Q53EQ6 642 aa15.24■□□□□ 0.03
VPS29-211ENST00000553128 C7orf31Q8N865 590 aa15.24■□□□□ 0.03
VPS29-211ENST00000553128 TBC1D5Q92609 795 aa15.24■□□□□ 0.03
VPS29-211ENST00000553128 NACAP1Q9BZK3 213 aa15.24■□□□□ 0.03
VPS29-211ENST00000553128 CTNNA3Q9UI47 895 aa15.24■□□□□ 0.03
VPS29-211ENST00000553128 CCER2I3L3R5 266 aa15.23■□□□□ 0.03
VPS29-211ENST00000553128 RANBP6O60518 1105 aaKnown RBP15.23■□□□□ 0.03
VPS29-211ENST00000553128 GH1P01241 217 aa15.23■□□□□ 0.03
VPS29-211ENST00000553128 ZFYP08048 801 aaPredicted RBP15.23■□□□□ 0.03
VPS29-211ENST00000553128 PTK7Q13308 1070 aa15.23■□□□□ 0.03
VPS29-211ENST00000553128 RPAINQ86UA6 219 aa15.23■□□□□ 0.03
VPS29-211ENST00000553128 MFSD14AQ96MC6 490 aa15.23■□□□□ 0.03
VPS29-211ENST00000553128 TMEM47Q9BQJ4 181 aa15.23■□□□□ 0.03
VPS29-211ENST00000553128 NSUN3Q9H649 340 aaKnown RBP15.23■□□□□ 0.03
VPS29-211ENST00000553128 COL20A1Q9P218 1284 aa15.23■□□□□ 0.03
VPS29-211ENST00000553128 TECTAO75443 2155 aa15.22■□□□□ 0.03
VPS29-211ENST00000553128 AMHP03971 560 aa15.22■□□□□ 0.03
VPS29-211ENST00000553128 CASTP20810 708 aaKnown RBP15.22■□□□□ 0.03
VPS29-211ENST00000553128 MFSD10Q14728 455 aa15.22■□□□□ 0.03
VPS29-211ENST00000553128 KIAA0753Q2KHM9 967 aa15.22■□□□□ 0.03
VPS29-211ENST00000553128 HERC4Q5GLZ8 1057 aaPredicted RBP15.22■□□□□ 0.03
VPS29-211ENST00000553128 PPP4R3BQ5MIZ7 849 aa15.22■□□□□ 0.03
VPS29-211ENST00000553128 RNF135Q8IUD6 432 aa15.22■□□□□ 0.03
VPS29-211ENST00000553128 TMEM192Q8IY95 271 aa15.22■□□□□ 0.03
VPS29-211ENST00000553128 TAAR1Q96RJ0 339 aa15.22■□□□□ 0.03
VPS29-211ENST00000553128 MPHOSPH6Q99547 160 aaKnown RBP15.22■□□□□ 0.03
VPS29-211ENST00000553128 MICAL3Q7RTP6 2002 aa15.21■□□□□ 0.03
VPS29-211ENST00000553128 HAS3O00219 553 aa15.21■□□□□ 0.03
VPS29-211ENST00000553128 UPP2O95045 317 aa15.21■□□□□ 0.03
VPS29-211ENST00000553128 GTF2F1P35269 517 aaKnown RBP eCLIP15.21■□□□□ 0.03
VPS29-211ENST00000553128 SMAD2Q15796 467 aaKnown RBP15.21■□□□□ 0.03
VPS29-211ENST00000553128 DGKDQ16760 1214 aa15.21■□□□□ 0.03
VPS29-211ENST00000553128 CTC1Q2NKJ3 1217 aa15.21■□□□□ 0.03
VPS29-211ENST00000553128 USH1GQ495M9 461 aa15.21■□□□□ 0.03
VPS29-211ENST00000553128 FBXO11Q86XK2 927 aa15.21■□□□□ 0.03
VPS29-211ENST00000553128 CPVLQ9H3G5 476 aa15.21■□□□□ 0.03
VPS29-211ENST00000553128 DDX19BQ9UMR2 479 aa15.21■□□□□ 0.03
VPS29-211ENST00000553128 FAM50BQ9Y247 325 aa15.21■□□□□ 0.03
VPS29-211ENST00000553128 MYO7AQ13402 2215 aa15.21■□□□□ 0.03
VPS29-211ENST00000553128 ATG2AQ2TAZ0 1938 aa15.21■□□□□ 0.02
VPS29-211ENST00000553128 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.2■□□□□ 0.02
VPS29-211ENST00000553128 MBTPS2O43462 519 aa15.2■□□□□ 0.02
VPS29-211ENST00000553128 F2P00734 622 aa15.2■□□□□ 0.02
VPS29-211ENST00000553128 PDHBP11177 359 aa15.2■□□□□ 0.02
VPS29-211ENST00000553128 THPOP40225 353 aa15.2■□□□□ 0.02
VPS29-211ENST00000553128 HYAL1Q12794 435 aa15.2■□□□□ 0.02
VPS29-211ENST00000553128 TCF15Q12870 199 aa15.2■□□□□ 0.02
VPS29-211ENST00000553128 PLEKHG4Q58EX7 1191 aa15.2■□□□□ 0.02
VPS29-211ENST00000553128 ZMYM1Q5SVZ6 1142 aa15.2■□□□□ 0.02
VPS29-211ENST00000553128 VPS53Q5VIR6 699 aa15.2■□□□□ 0.02
VPS29-211ENST00000553128 TOP1MTQ969P6 601 aa15.2■□□□□ 0.02
VPS29-211ENST00000553128 SAMD11Q96NU1 681 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms