RNA–Protein interactions for RNA: ENST00000553065.1

DDX23-217, Transcript of DEAD-box helicase 23, humanhuman

TSL 2

Gene DDX23, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-217ENST00000553065 STXBP2Q15833 593 aa12.28□□□□□ -0.44
DDX23-217ENST00000553065 TCTN1Q2MV58 587 aa12.28□□□□□ -0.44
DDX23-217ENST00000553065 OTOP2Q7RTS6 562 aa12.28□□□□□ -0.44
DDX23-217ENST00000553065 DHX38Q92620 1227 aaKnown RBP12.28□□□□□ -0.44
DDX23-217ENST00000553065 ESYT1Q9BSJ8 1104 aa12.28□□□□□ -0.44
DDX23-217ENST00000553065 MYL10Q9BUA6 226 aa12.28□□□□□ -0.44
DDX23-217ENST00000553065 SCN5AQ14524 2016 aa12.27□□□□□ -0.44
DDX23-217ENST00000553065 PNMA6FA0A0J9YX94 578 aa12.27□□□□□ -0.45
DDX23-217ENST00000553065 HAS3O00219 553 aa12.27□□□□□ -0.45
DDX23-217ENST00000553065 SLC27A2O14975 620 aa12.27□□□□□ -0.45
DDX23-217ENST00000553065 DHX16O60231 1041 aaKnown RBP12.27□□□□□ -0.45
DDX23-217ENST00000553065 IQCF3P0C7M6 154 aa12.27□□□□□ -0.45
DDX23-217ENST00000553065 HOXD8P13378 290 aaPredicted RBP12.27□□□□□ -0.45
DDX23-217ENST00000553065 MYOGP15173 224 aa12.27□□□□□ -0.45
DDX23-217ENST00000553065 SEMA3FQ13275 785 aa12.27□□□□□ -0.45
DDX23-217ENST00000553065 ADGRE1Q14246 886 aa12.27□□□□□ -0.45
DDX23-217ENST00000553065 WTAPQ15007 396 aa12.27□□□□□ -0.45
DDX23-217ENST00000553065 PGM5Q15124 567 aa12.27□□□□□ -0.45
DDX23-217ENST00000553065 TMEM67Q5HYA8 995 aa12.27□□□□□ -0.45
DDX23-217ENST00000553065 ARHGEF16Q5VV41 709 aa12.27□□□□□ -0.45
DDX23-217ENST00000553065 MYSM1Q5VVJ2 828 aa12.27□□□□□ -0.45
DDX23-217ENST00000553065 GDF6Q6KF10 455 aaPredicted RBP12.27□□□□□ -0.45
DDX23-217ENST00000553065 NFRKBQ6P4R8 1299 aa12.27□□□□□ -0.45
DDX23-217ENST00000553065 HOMER1Q86YM7 354 aa12.27□□□□□ -0.45
DDX23-217ENST00000553065 CMTR1Q8N1G2 835 aaKnown RBP12.27□□□□□ -0.45
DDX23-217ENST00000553065 SRBD1Q8N5C6 995 aaKnown RBP12.27□□□□□ -0.45
DDX23-217ENST00000553065 USP38Q8NB14 1042 aa12.27□□□□□ -0.45
DDX23-217ENST00000553065 WNT8BQ93098 351 aa12.27□□□□□ -0.45
DDX23-217ENST00000553065 EMID1Q96A84 441 aaPredicted RBP12.27□□□□□ -0.45
DDX23-217ENST00000553065 ZNF576Q9H609 170 aa12.27□□□□□ -0.45
DDX23-217ENST00000553065 MUC3AQ02505 3323 aa12.27□□□□□ -0.45
DDX23-217ENST00000553065 CUL9Q8IWT3 2517 aa12.27□□□□□ -0.45
DDX23-217ENST00000553065 SH2B2O14492 632 aaPredicted RBP12.26□□□□□ -0.45
DDX23-217ENST00000553065 MEIS2O14770 477 aa12.26□□□□□ -0.45
DDX23-217ENST00000553065 KPNA6O60684 536 aa12.26□□□□□ -0.45
DDX23-217ENST00000553065 PLEKHA8P1O95397 391 aa12.26□□□□□ -0.45
DDX23-217ENST00000553065 GH1P01241 217 aa12.26□□□□□ -0.45
DDX23-217ENST00000553065 RABGGTBP53611 331 aa12.26□□□□□ -0.45
DDX23-217ENST00000553065 ZNF200P98182 395 aaPredicted RBP12.26□□□□□ -0.45
DDX23-217ENST00000553065 TRDNQ13061 729 aa12.26□□□□□ -0.45
DDX23-217ENST00000553065 HSDL1Q3SXM5 330 aa12.26□□□□□ -0.45
DDX23-217ENST00000553065 CREB3L3Q68CJ9 461 aa12.26□□□□□ -0.45
DDX23-217ENST00000553065 TRAF7Q6Q0C0 670 aa12.26□□□□□ -0.45
DDX23-217ENST00000553065 RASEFQ8IZ41 740 aa12.26□□□□□ -0.45
DDX23-217ENST00000553065 PIBF1Q8WXW3 757 aa12.26□□□□□ -0.45
DDX23-217ENST00000553065 TIFAQ96CG3 184 aa12.26□□□□□ -0.45
DDX23-217ENST00000553065 MAP3K20Q9NYL2 800 aaKnown RBP12.26□□□□□ -0.45
DDX23-217ENST00000553065 MYH6P13533 1939 aa12.26□□□□□ -0.45
DDX23-217ENST00000553065 KIAA1217Q5T5P2 1943 aa12.26□□□□□ -0.45
DDX23-217ENST00000553065 XIRP2A4UGR9 3374 aa12.26□□□□□ -0.45
DDX23-217ENST00000553065 MYO9BQ13459 2157 aa12.25□□□□□ -0.45
DDX23-217ENST00000553065 TMEM265A0A087WTH1 108 aa12.25□□□□□ -0.45
DDX23-217ENST00000553065 PRC1O43663 620 aa12.25□□□□□ -0.45
DDX23-217ENST00000553065 SORBS3O60504 671 aa12.25□□□□□ -0.45
DDX23-217ENST00000553065 ARHGEF15O94989 841 aa12.25□□□□□ -0.45
DDX23-217ENST00000553065 MYCLP12524 364 aaPredicted RBP12.25□□□□□ -0.45
DDX23-217ENST00000553065 RXRAP19793 462 aa12.25□□□□□ -0.45
DDX23-217ENST00000553065 PTPN11Q06124 597 aaPredicted RBP12.25□□□□□ -0.45
DDX23-217ENST00000553065 TRIM71Q2Q1W2 868 aaKnown RBP12.25□□□□□ -0.45
DDX23-217ENST00000553065 PSRC1Q6PGN9 363 aaPredicted RBP12.25□□□□□ -0.45
DDX23-217ENST00000553065 SESTD1Q86VW0 696 aa12.25□□□□□ -0.45
DDX23-217ENST00000553065 ZNF654Q8IZM8 581 aa12.25□□□□□ -0.45
DDX23-217ENST00000553065 MAP3K14Q99558 947 aa12.25□□□□□ -0.45
DDX23-217ENST00000553065 C16orf70Q9BSU1 422 aa12.25□□□□□ -0.45
DDX23-217ENST00000553065 COL25A1Q9BXS0 654 aaPredicted RBP12.25□□□□□ -0.45
DDX23-217ENST00000553065 LRRC2Q9BYS8 371 aa12.25□□□□□ -0.45
DDX23-217ENST00000553065 OSBPL7Q9BZF2 842 aa12.25□□□□□ -0.45
DDX23-217ENST00000553065 HDAC6Q9UBN7 1215 aa12.25□□□□□ -0.45
DDX23-217ENST00000553065 TRIP12Q14669 1992 aaPredicted RBP12.25□□□□□ -0.45
DDX23-217ENST00000553065 MYH7BA7E2Y1 1941 aa12.24□□□□□ -0.45
DDX23-217ENST00000553065 B4DLN1 442 aa12.24□□□□□ -0.45
DDX23-217ENST00000553065 GCOM1H8Y6P7 765 aaPredicted RBP12.24□□□□□ -0.45
DDX23-217ENST00000553065 SUPT20HL2P0C7V6 817 aa12.24□□□□□ -0.45
DDX23-217ENST00000553065 POLR2MP0CAP2 368 aa12.24□□□□□ -0.45
DDX23-217ENST00000553065 SMARCA1P28370 1054 aa12.24□□□□□ -0.45
DDX23-217ENST00000553065 MRPL12P52815 198 aaKnown RBP12.24□□□□□ -0.45
DDX23-217ENST00000553065 EXOSC10Q01780 885 aaKnown RBP12.24□□□□□ -0.45
DDX23-217ENST00000553065 FRMPD4Q14CM0 1322 aa12.24□□□□□ -0.45
DDX23-217ENST00000553065 FAM47CQ5HY64 1035 aa12.24□□□□□ -0.45
DDX23-217ENST00000553065 CELF3Q5SZQ8 465 aaKnown RBP12.24□□□□□ -0.45
DDX23-217ENST00000553065 USP17L6PQ6QN14 398 aa12.24□□□□□ -0.45
DDX23-217ENST00000553065 DEFB128Q7Z7B8 93 aa12.24□□□□□ -0.45
DDX23-217ENST00000553065 FCHSD1Q86WN1 690 aa12.24□□□□□ -0.45
DDX23-217ENST00000553065 RAB11FIP4Q86YS3 637 aa12.24□□□□□ -0.45
DDX23-217ENST00000553065 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.24□□□□□ -0.45
DDX23-217ENST00000553065 SAMD3Q8N6K7 520 aa12.24□□□□□ -0.45
DDX23-217ENST00000553065 MAFAQ8NHW3 353 aaPredicted RBP12.24□□□□□ -0.45
DDX23-217ENST00000553065 NKX2-4Q9H2Z4 354 aa12.24□□□□□ -0.45
DDX23-217ENST00000553065 PRDM6Q9NQX0 595 aa12.24□□□□□ -0.45
DDX23-217ENST00000553065 GTF2IRD1Q9UHL9 959 aa12.24□□□□□ -0.45
DDX23-217ENST00000553065 hCG_1642624A0A1W2PR95 340 aa12.23□□□□□ -0.45
DDX23-217ENST00000553065 SPATA31C2B4DYI2 1134 aa12.23□□□□□ -0.45
DDX23-217ENST00000553065 PPFIA4O75335 1185 aa12.23□□□□□ -0.45
DDX23-217ENST00000553065 CASTP20810 708 aaKnown RBP12.23□□□□□ -0.45
DDX23-217ENST00000553065 ICAM3P32942 547 aa12.23□□□□□ -0.45
DDX23-217ENST00000553065 LIFRP42702 1097 aa12.23□□□□□ -0.45
DDX23-217ENST00000553065 PSEN2P49810 448 aa12.23□□□□□ -0.45
DDX23-217ENST00000553065 FUT2Q10981 343 aa12.23□□□□□ -0.45
DDX23-217ENST00000553065 LAMC2Q13753 1193 aa12.23□□□□□ -0.45
DDX23-217ENST00000553065 MBTPS1Q14703 1052 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms