RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 PXMP2Q9NR77 195 aa13.36□□□□□ -0.27
NEK3-204ENST00000552973 MAD2L2Q9UI95 211 aa13.36□□□□□ -0.27
NEK3-204ENST00000552973 MRVI1Q9Y6F6 885 aa13.36□□□□□ -0.27
NEK3-204ENST00000552973 OPLAHO14841 1288 aa13.35□□□□□ -0.27
NEK3-204ENST00000552973 EIF3JO75822 258 aaKnown RBP13.35□□□□□ -0.27
NEK3-204ENST00000552973 CYP21A2P08686 494 aa13.35□□□□□ -0.27
NEK3-204ENST00000552973 ACTN1P12814 892 aa13.35□□□□□ -0.27
NEK3-204ENST00000552973 TRDNQ13061 729 aa13.35□□□□□ -0.27
NEK3-204ENST00000552973 BFSP2Q13515 415 aa13.35□□□□□ -0.27
NEK3-204ENST00000552973 TMEM67Q5HYA8 995 aa13.35□□□□□ -0.27
NEK3-204ENST00000552973 TJAP1Q5JTD0 557 aa13.35□□□□□ -0.27
NEK3-204ENST00000552973 SYMPKQ92797 1274 aaKnown RBP13.35□□□□□ -0.27
NEK3-204ENST00000552973 PCDHA11Q9Y5I1 949 aa13.35□□□□□ -0.27
NEK3-204ENST00000552973 PCDHA1Q9Y5I3 950 aa13.35□□□□□ -0.27
NEK3-204ENST00000552973 TAF6LQ9Y6J9 622 aa13.35□□□□□ -0.27
NEK3-204ENST00000552973 LAMA2P24043 3122 aaKnown RBP13.34□□□□□ -0.27
NEK3-204ENST00000552973 PALM3A6NDB9 673 aaPredicted RBP13.34□□□□□ -0.27
NEK3-204ENST00000552973 IFIT3O14879 490 aaKnown RBP13.34□□□□□ -0.27
NEK3-204ENST00000552973 ZBTB5O15062 677 aa13.34□□□□□ -0.27
NEK3-204ENST00000552973 CA3P07451 260 aa13.34□□□□□ -0.27
NEK3-204ENST00000552973 HSD17B4P51659 736 aa13.34□□□□□ -0.27
NEK3-204ENST00000552973 DGKDQ16760 1214 aa13.34□□□□□ -0.27
NEK3-204ENST00000552973 SLC35G1Q2M3R5 365 aa13.34□□□□□ -0.27
NEK3-204ENST00000552973 DHX37Q8IY37 1157 aaKnown RBP13.34□□□□□ -0.27
NEK3-204ENST00000552973 PIBF1Q8WXW3 757 aa13.34□□□□□ -0.27
NEK3-204ENST00000552973 CTAGE1Q96RT6 745 aa13.34□□□□□ -0.27
NEK3-204ENST00000552973 PIGSQ96S52 555 aa13.34□□□□□ -0.27
NEK3-204ENST00000552973 PDCD2LQ9BRP1 358 aa13.34□□□□□ -0.27
NEK3-204ENST00000552973 HDAC6Q9UBN7 1215 aa13.34□□□□□ -0.27
NEK3-204ENST00000552973 PITPNM1O00562 1244 aa13.33□□□□□ -0.28
NEK3-204ENST00000552973 RGS20O76081 388 aa13.33□□□□□ -0.28
NEK3-204ENST00000552973 ARHGEF15O94989 841 aa13.33□□□□□ -0.28
NEK3-204ENST00000552973 ZNF286BP0CG31 522 aa13.33□□□□□ -0.28
NEK3-204ENST00000552973 CHMLP26374 656 aa13.33□□□□□ -0.28
NEK3-204ENST00000552973 RFC2P35250 354 aa13.33□□□□□ -0.28
NEK3-204ENST00000552973 PSEN2P49810 448 aa13.33□□□□□ -0.28
NEK3-204ENST00000552973 LAMC2Q13753 1193 aa13.33□□□□□ -0.28
NEK3-204ENST00000552973 GPNMBQ14956 572 aa13.33□□□□□ -0.28
NEK3-204ENST00000552973 TMCO2Q7Z6W1 182 aaPredicted RBP13.33□□□□□ -0.28
NEK3-204ENST00000552973 FCHSD1Q86WN1 690 aa13.33□□□□□ -0.28
NEK3-204ENST00000552973 C7orf31Q8N865 590 aa13.33□□□□□ -0.28
NEK3-204ENST00000552973 IL31RAQ8NI17 732 aa13.33□□□□□ -0.28
NEK3-204ENST00000552973 DHX38Q92620 1227 aaKnown RBP13.33□□□□□ -0.28
NEK3-204ENST00000552973 MTMR8Q96EF0 704 aa13.33□□□□□ -0.28
NEK3-204ENST00000552973 MAF1Q9H063 256 aa13.33□□□□□ -0.28
NEK3-204ENST00000552973 CDH23Q9H251 3354 aa13.32□□□□□ -0.28
NEK3-204ENST00000552973 GCOM1H8Y6P7 765 aaPredicted RBP13.32□□□□□ -0.28
NEK3-204ENST00000552973 POLR2MP0CAP2 368 aa13.32□□□□□ -0.28
NEK3-204ENST00000552973 ZNF200P98182 395 aaPredicted RBP13.32□□□□□ -0.28
NEK3-204ENST00000552973 MFSD10Q14728 455 aa13.32□□□□□ -0.28
NEK3-204ENST00000552973 GRM4Q14833 912 aa13.32□□□□□ -0.28
NEK3-204ENST00000552973 PGM5Q15124 567 aa13.32□□□□□ -0.28
NEK3-204ENST00000552973 KIAA0753Q2KHM9 967 aa13.32□□□□□ -0.28
NEK3-204ENST00000552973 SESTD1Q86VW0 696 aa13.32□□□□□ -0.28
NEK3-204ENST00000552973 HERC6Q8IVU3 1022 aa13.32□□□□□ -0.28
NEK3-204ENST00000552973 CCDC155Q8N6L0 562 aa13.32□□□□□ -0.28
NEK3-204ENST00000552973 RUFY2Q8WXA3 655 aa13.32□□□□□ -0.28
NEK3-204ENST00000552973 ARNTL2Q8WYA1 636 aa13.32□□□□□ -0.28
NEK3-204ENST00000552973 GPKOWQ92917 476 aaPredicted RBP eCLIP13.32□□□□□ -0.28
NEK3-204ENST00000552973 SLC9A7Q96T83 725 aa13.32□□□□□ -0.28
NEK3-204ENST00000552973 THEGQ9P2T0 379 aa13.32□□□□□ -0.28
NEK3-204ENST00000552973 GTF2IRD1Q9UHL9 959 aa13.32□□□□□ -0.28
NEK3-204ENST00000552973 U3KPZ7 1027 aaPredicted RBP13.32□□□□□ -0.28
NEK3-204ENST00000552973 ERICH2A1L162 156 aa13.31□□□□□ -0.28
NEK3-204ENST00000552973 EPOPA6NHQ4 379 aa13.31□□□□□ -0.28
NEK3-204ENST00000552973 E7EWF7 191 aa13.31□□□□□ -0.28
NEK3-204ENST00000552973 CYTH3O43739 400 aa13.31□□□□□ -0.28
NEK3-204ENST00000552973 GGPS1O95749 300 aa13.31□□□□□ -0.28
NEK3-204ENST00000552973 CKBP12277 381 aa13.31□□□□□ -0.28
NEK3-204ENST00000552973 SELPP16109 830 aa13.31□□□□□ -0.28
NEK3-204ENST00000552973 SP2Q02086 613 aa13.31□□□□□ -0.28
NEK3-204ENST00000552973 WTAPQ15007 396 aa13.31□□□□□ -0.28
NEK3-204ENST00000552973 SKIV2LQ15477 1246 aaKnown RBP13.31□□□□□ -0.28
NEK3-204ENST00000552973 HSDL1Q3SXM5 330 aa13.31□□□□□ -0.28
NEK3-204ENST00000552973 KRT40Q6A162 431 aa13.31□□□□□ -0.28
NEK3-204ENST00000552973 STOX1Q6ZVD7 989 aa13.31□□□□□ -0.28
NEK3-204ENST00000552973 LRRC8DQ7L1W4 858 aa13.31□□□□□ -0.28
NEK3-204ENST00000552973 SPRED2Q7Z698 418 aa13.31□□□□□ -0.28
NEK3-204ENST00000552973 RALYLQ86SE5 291 aaKnown RBP13.31□□□□□ -0.28
NEK3-204ENST00000552973 VSIG10LQ86VR7 867 aa13.31□□□□□ -0.28
NEK3-204ENST00000552973 NCOA7Q8NI08 942 aa13.31□□□□□ -0.28
NEK3-204ENST00000552973 PPTC7Q8NI37 304 aa13.31□□□□□ -0.28
NEK3-204ENST00000552973 CAGE1Q8TC20 777 aa13.31□□□□□ -0.28
NEK3-204ENST00000552973 PHOSPHO2Q8TCD6 241 aa13.31□□□□□ -0.28
NEK3-204ENST00000552973 AFAP1L1Q8TED9 768 aa13.31□□□□□ -0.28
NEK3-204ENST00000552973 ATXN2LQ8WWM7 1075 aaKnown RBP13.31□□□□□ -0.28
NEK3-204ENST00000552973 WNT8BQ93098 351 aa13.31□□□□□ -0.28
NEK3-204ENST00000552973 SPATA33Q96N06 139 aa13.31□□□□□ -0.28
NEK3-204ENST00000552973 ASB2Q96Q27 587 aa13.31□□□□□ -0.28
NEK3-204ENST00000552973 BCAS3Q9H6U6 928 aa13.31□□□□□ -0.28
NEK3-204ENST00000552973 RIOX1Q9H6W3 641 aa13.31□□□□□ -0.28
NEK3-204ENST00000552973 UNC80Q8N2C7 3258 aa13.31□□□□□ -0.28
NEK3-204ENST00000552973 A0A0C4DFX4 3053 aa13.31□□□□□ -0.28
NEK3-204ENST00000552973 KIF28PB7ZC32 967 aa13.3□□□□□ -0.28
NEK3-204ENST00000552973 TLL1O43897 1013 aa13.3□□□□□ -0.28
NEK3-204ENST00000552973 NBNO60934 754 aa13.3□□□□□ -0.28
NEK3-204ENST00000552973 KCNJ6P48051 423 aa13.3□□□□□ -0.28
NEK3-204ENST00000552973 MRPS5P82675 430 aaKnown RBP13.3□□□□□ -0.28
NEK3-204ENST00000552973 GHRHRQ02643 423 aa13.3□□□□□ -0.28
NEK3-204ENST00000552973 TAP1Q03518 808 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms