RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 CHUKO15111 745 aa12.75□□□□□ -0.37
PPFIA2-227ENST00000552948 MDH1P40925 334 aaKnown RBP12.75□□□□□ -0.37
PPFIA2-227ENST00000552948 PPP1R7Q15435 360 aa12.75□□□□□ -0.37
PPFIA2-227ENST00000552948 ASIC2Q16515 512 aa12.75□□□□□ -0.37
PPFIA2-227ENST00000552948 NAALADL2Q58DX5 795 aa12.75□□□□□ -0.37
PPFIA2-227ENST00000552948 DCAF17Q5H9S7 520 aaPredicted RBP12.75□□□□□ -0.37
PPFIA2-227ENST00000552948 MTA3Q9BTC8 594 aa12.75□□□□□ -0.37
PPFIA2-227ENST00000552948 KRIT1O00522 736 aa12.75□□□□□ -0.37
PPFIA2-227ENST00000552948 RUFY4Q6ZNE9 571 aa12.75□□□□□ -0.37
PPFIA2-227ENST00000552948 SPATS2Q86XZ4 545 aaKnown RBP12.75□□□□□ -0.37
PPFIA2-227ENST00000552948 DDX47Q9H0S4 455 aaKnown RBP12.75□□□□□ -0.37
PPFIA2-227ENST00000552948 NKRFO15226 690 aaKnown RBP eCLIP12.75□□□□□ -0.37
PPFIA2-227ENST00000552948 VIMP08670 466 aaKnown RBP12.75□□□□□ -0.37
PPFIA2-227ENST00000552948 FGFR2P21802 821 aa12.75□□□□□ -0.37
PPFIA2-227ENST00000552948 GNA11P29992 359 aa12.75□□□□□ -0.37
PPFIA2-227ENST00000552948 EIF6P56537 245 aaKnown RBP12.75□□□□□ -0.37
PPFIA2-227ENST00000552948 CALCRLQ16602 461 aa12.75□□□□□ -0.37
PPFIA2-227ENST00000552948 HERC4Q5GLZ8 1057 aaPredicted RBP12.75□□□□□ -0.37
PPFIA2-227ENST00000552948 DAAM2Q86T65 1068 aa12.75□□□□□ -0.37
PPFIA2-227ENST00000552948 SLC44A5Q8NCS7 719 aa12.75□□□□□ -0.37
PPFIA2-227ENST00000552948 MYCBPAPQ8TBZ2 947 aa12.75□□□□□ -0.37
PPFIA2-227ENST00000552948 TBCKQ8TEA7 893 aa12.75□□□□□ -0.37
PPFIA2-227ENST00000552948 TLR10Q9BXR5 811 aa12.75□□□□□ -0.37
PPFIA2-227ENST00000552948 MST1RQ04912 1400 aa12.75□□□□□ -0.37
PPFIA2-227ENST00000552948 KLRC1P26715 233 aa12.74□□□□□ -0.37
PPFIA2-227ENST00000552948 PRDX5P30044 214 aa12.74□□□□□ -0.37
PPFIA2-227ENST00000552948 PPP1R2P41236 205 aa12.74□□□□□ -0.37
PPFIA2-227ENST00000552948 FUT2Q10981 343 aa12.74□□□□□ -0.37
PPFIA2-227ENST00000552948 SNCBQ16143 134 aa12.74□□□□□ -0.37
PPFIA2-227ENST00000552948 PTGISQ16647 500 aa12.74□□□□□ -0.37
PPFIA2-227ENST00000552948 NEK8Q86SG6 692 aa12.74□□□□□ -0.37
PPFIA2-227ENST00000552948 CADPS2Q86UW7 1296 aa12.74□□□□□ -0.37
PPFIA2-227ENST00000552948 MYH8P13535 1937 aa12.74□□□□□ -0.37
PPFIA2-227ENST00000552948 RAD51CO43502 376 aa12.74□□□□□ -0.37
PPFIA2-227ENST00000552948 NEDD9Q14511 834 aa12.74□□□□□ -0.37
PPFIA2-227ENST00000552948 PEX26Q7Z412 305 aa12.74□□□□□ -0.37
PPFIA2-227ENST00000552948 CASKIN2Q8WXE0 1202 aa12.74□□□□□ -0.37
PPFIA2-227ENST00000552948 AFDNP55196 1824 aaKnown RBP12.74□□□□□ -0.37
PPFIA2-227ENST00000552948 POTEMA6NI47 508 aa12.74□□□□□ -0.37
PPFIA2-227ENST00000552948 SHOX2O60902 331 aaPredicted RBP12.74□□□□□ -0.37
PPFIA2-227ENST00000552948 CLTAP09496 248 aa12.74□□□□□ -0.37
PPFIA2-227ENST00000552948 TCP11Q8WWU5 503 aa12.74□□□□□ -0.37
PPFIA2-227ENST00000552948 LARP4BQ92615 738 aaKnown RBP12.74□□□□□ -0.37
PPFIA2-227ENST00000552948 DCP1AQ9NPI6 582 aaPredicted RBP12.74□□□□□ -0.37
PPFIA2-227ENST00000552948 PCDHA6Q9UN73 950 aa12.74□□□□□ -0.37
PPFIA2-227ENST00000552948 ATP8A1Q9Y2Q0 1164 aa12.74□□□□□ -0.37
PPFIA2-227ENST00000552948 PCDHA8Q9Y5H6 950 aa12.74□□□□□ -0.37
PPFIA2-227ENST00000552948 ZNF233A6NK53 670 aa12.73□□□□□ -0.37
PPFIA2-227ENST00000552948 HMGB1P1B2RPK0 211 aaPredicted RBP12.73□□□□□ -0.37
PPFIA2-227ENST00000552948 KRT13P13646 458 aa12.73□□□□□ -0.37
PPFIA2-227ENST00000552948 GKAP1Q5VSY0 366 aaPredicted RBP12.73□□□□□ -0.37
PPFIA2-227ENST00000552948 KRT25Q7Z3Z0 450 aa12.73□□□□□ -0.37
PPFIA2-227ENST00000552948 MYOCDQ8IZQ8 938 aa12.73□□□□□ -0.37
PPFIA2-227ENST00000552948 HAUS2Q9NVX0 235 aa12.73□□□□□ -0.37
PPFIA2-227ENST00000552948 SALL4Q9UJQ4 1053 aa12.73□□□□□ -0.37
PPFIA2-227ENST00000552948 KLRC4O43908 158 aa12.73□□□□□ -0.37
PPFIA2-227ENST00000552948 IFNAR2P48551 515 aa12.73□□□□□ -0.37
PPFIA2-227ENST00000552948 MECOMQ03112 1051 aa12.73□□□□□ -0.37
PPFIA2-227ENST00000552948 FAM83BQ5T0W9 1011 aa12.73□□□□□ -0.37
PPFIA2-227ENST00000552948 HIBCHQ6NVY1 386 aaPredicted RBP12.73□□□□□ -0.37
PPFIA2-227ENST00000552948 USP17L2Q6R6M4 530 aa12.73□□□□□ -0.37
PPFIA2-227ENST00000552948 VPS36Q86VN1 386 aa12.73□□□□□ -0.37
PPFIA2-227ENST00000552948 MAPKAPK5Q8IW41 473 aa12.73□□□□□ -0.37
PPFIA2-227ENST00000552948 CCDC13Q8IYE1 715 aa12.73□□□□□ -0.37
PPFIA2-227ENST00000552948 KIRREL3Q8IZU9 778 aa12.73□□□□□ -0.37
PPFIA2-227ENST00000552948 ERGIC2Q96RQ1 377 aa12.73□□□□□ -0.37
PPFIA2-227ENST00000552948 CCSER1Q9C0I3 900 aa12.73□□□□□ -0.37
PPFIA2-227ENST00000552948 SEMA6BQ9H3T3 888 aa12.73□□□□□ -0.37
PPFIA2-227ENST00000552948 VEZTQ9HBM0 779 aa12.73□□□□□ -0.37
PPFIA2-227ENST00000552948 KBTBD4Q9NVX7 518 aa12.73□□□□□ -0.37
PPFIA2-227ENST00000552948 GMNCA6NCL1 334 aa12.73□□□□□ -0.37
PPFIA2-227ENST00000552948 CPP00450 1065 aa12.73□□□□□ -0.37
PPFIA2-227ENST00000552948 MAGOHP61326 146 aaKnown RBP12.73□□□□□ -0.37
PPFIA2-227ENST00000552948 DHX9Q08211 1270 aaKnown RBP12.73□□□□□ -0.37
PPFIA2-227ENST00000552948 NPY5RQ15761 445 aa12.73□□□□□ -0.37
PPFIA2-227ENST00000552948 KLHDC7AQ5VTJ3 777 aa12.73□□□□□ -0.37
PPFIA2-227ENST00000552948 REXO1Q8N1G1 1221 aaKnown RBP12.73□□□□□ -0.37
PPFIA2-227ENST00000552948 WHAMMQ8TF30 809 aa12.73□□□□□ -0.37
PPFIA2-227ENST00000552948 MAGOHBQ96A72 148 aaKnown RBP12.73□□□□□ -0.37
PPFIA2-227ENST00000552948 GRIN2DO15399 1336 aa12.73□□□□□ -0.37
PPFIA2-227ENST00000552948 PHF20L1A8MW92 1017 aa12.72□□□□□ -0.37
PPFIA2-227ENST00000552948 MYL1P05976 194 aa12.72□□□□□ -0.37
PPFIA2-227ENST00000552948 GLE1Q53GS7 698 aaKnown RBP12.72□□□□□ -0.37
PPFIA2-227ENST00000552948 KCNV1Q6PIU1 500 aa12.72□□□□□ -0.37
PPFIA2-227ENST00000552948 CCDC25Q86WR0 208 aa12.72□□□□□ -0.37
PPFIA2-227ENST00000552948 TGFBRAP1Q8WUH2 860 aa12.72□□□□□ -0.37
PPFIA2-227ENST00000552948 TNFRSF25Q93038 417 aa12.72□□□□□ -0.37
PPFIA2-227ENST00000552948 SH3GL2Q99962 352 aa12.72□□□□□ -0.37
PPFIA2-227ENST00000552948 N4BP2Q86UW6 1770 aaPredicted RBP12.72□□□□□ -0.37
PPFIA2-227ENST00000552948 NEBLO76041 1014 aa12.72□□□□□ -0.37
PPFIA2-227ENST00000552948 MAP2K1Q02750 393 aaPredicted RBP12.72□□□□□ -0.37
PPFIA2-227ENST00000552948 PDXDC1Q6P996 788 aa12.72□□□□□ -0.37
PPFIA2-227ENST00000552948 CYFIP2Q96F07 1278 aa12.72□□□□□ -0.37
PPFIA2-227ENST00000552948 BRIP1Q9BX63 1249 aa12.72□□□□□ -0.37
PPFIA2-227ENST00000552948 PACSIN1Q9BY11 444 aa12.72□□□□□ -0.37
PPFIA2-227ENST00000552948 SLC40A1Q9NP59 571 aa12.72□□□□□ -0.37
PPFIA2-227ENST00000552948 TMEM260Q9NX78 707 aa12.72□□□□□ -0.37
PPFIA2-227ENST00000552948 LMO7Q8WWI1 1683 aa12.72□□□□□ -0.37
PPFIA2-227ENST00000552948 PPP1R12BO60237 982 aaPredicted RBP12.72□□□□□ -0.37
PPFIA2-227ENST00000552948 CTNND1O60716 968 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms