RNA–Protein interactions for RNA: ENST00000552943.5

WDR90-224, Transcript of WD repeat domain 90, humanhuman

TSL 1 (best)

Gene WDR90, Length 5,498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR90-224ENST00000552943 SYNE4Q8N205 404 aa21.35■■□□□ 1.01
WDR90-224ENST00000552943 CCDC125Q86Z20 511 aa21.34■■□□□ 1.01
WDR90-224ENST00000552943 NT5C1BQ96P26 610 aa21.34■■□□□ 1.01
WDR90-224ENST00000552943 CRB1P82279 1406 aa21.34■■□□□ 1.01
WDR90-224ENST00000552943 IFNB1P01574 187 aa21.34■■□□□ 1.01
WDR90-224ENST00000552943 TMEM191BP0C7N4 346 aa21.34■■□□□ 1.01
WDR90-224ENST00000552943 NSFP46459 744 aaKnown RBP21.34■■□□□ 1.01
WDR90-224ENST00000552943 BPIFB4P59827 614 aa21.34■■□□□ 1.01
WDR90-224ENST00000552943 UBE2SQ16763 222 aa21.34■■□□□ 1.01
WDR90-224ENST00000552943 ZNF579Q8NAF0 562 aaKnown RBP21.34■■□□□ 1.01
WDR90-224ENST00000552943 ACCSQ96QU6 501 aa21.34■■□□□ 1.01
WDR90-224ENST00000552943 ADPGKQ9BRR6 497 aa21.34■■□□□ 1.01
WDR90-224ENST00000552943 HNRNPDLO14979 420 aaKnown RBP21.34■■□□□ 1.01
WDR90-224ENST00000552943 FOXO4P98177 505 aa21.34■■□□□ 1.01
WDR90-224ENST00000552943 ALX1Q15699 326 aa21.34■■□□□ 1.01
WDR90-224ENST00000552943 SH3RF3Q8TEJ3 882 aaPredicted RBP21.34■■□□□ 1.01
WDR90-224ENST00000552943 NARFQ9UHQ1 456 aa21.34■■□□□ 1.01
WDR90-224ENST00000552943 CCDC170Q8IYT3 715 aa21.34■■□□□ 1.01
WDR90-224ENST00000552943 ODF2LQ9ULJ1 636 aa21.34■■□□□ 1.01
WDR90-224ENST00000552943 SOWAHDA6NJG2 315 aa21.33■■□□□ 1.01
WDR90-224ENST00000552943 PPP2R5AQ15172 486 aa21.33■■□□□ 1.01
WDR90-224ENST00000552943 CDC37Q16543 378 aaPredicted RBP21.33■■□□□ 1.01
WDR90-224ENST00000552943 CASC4Q6P4E1 433 aa21.33■■□□□ 1.01
WDR90-224ENST00000552943 FAM71BQ8TC56 605 aa21.33■■□□□ 1.01
WDR90-224ENST00000552943 EMILIN3Q9NT22 766 aa21.33■■□□□ 1.01
WDR90-224ENST00000552943 ARHGEF40Q8TER5 1519 aa21.33■■□□□ 1.01
WDR90-224ENST00000552943 HSPA1LP34931 641 aa21.33■■□□□ 1.01
WDR90-224ENST00000552943 GNGT1P63211 74 aa21.33■■□□□ 1.01
WDR90-224ENST00000552943 PTK2Q05397 1052 aa21.33■■□□□ 1.01
WDR90-224ENST00000552943 COL15A1P39059 1388 aa21.33■■□□□ 1.01
WDR90-224ENST00000552943 PLA2G4BP0C869 781 aa21.33■■□□□ 1.01
WDR90-224ENST00000552943 ATP1A3P13637 1013 aa21.33■■□□□ 1.01
WDR90-224ENST00000552943 CAMSAP1Q5T5Y3 1602 aa21.33■■□□□ 1
WDR90-224ENST00000552943 POLR2BP30876 1174 aaKnown RBP21.33■■□□□ 1
WDR90-224ENST00000552943 PIK3CAP42336 1068 aa21.33■■□□□ 1
WDR90-224ENST00000552943 APBA1Q02410 837 aa21.33■■□□□ 1
WDR90-224ENST00000552943 FOXP4Q8IVH2 680 aaPredicted RBP21.33■■□□□ 1
WDR90-224ENST00000552943 MIS12Q9H081 205 aa21.33■■□□□ 1
WDR90-224ENST00000552943 LY9Q9HBG7 655 aa21.33■■□□□ 1
WDR90-224ENST00000552943 GUCY2DQ02846 1103 aa21.32■■□□□ 1
WDR90-224ENST00000552943 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.32■■□□□ 1
WDR90-224ENST00000552943 ANKFY1Q9P2R3 1169 aa21.32■■□□□ 1
WDR90-224ENST00000552943 MEIS1O00470 390 aa21.32■■□□□ 1
WDR90-224ENST00000552943 ATP8B1O43520 1251 aa21.32■■□□□ 1
WDR90-224ENST00000552943 TCP11X2Q5H9J9 407 aa21.32■■□□□ 1
WDR90-224ENST00000552943 ADAT2Q7Z6V5 191 aaKnown RBP21.32■■□□□ 1
WDR90-224ENST00000552943 ACRBPQ8NEB7 543 aa21.32■■□□□ 1
WDR90-224ENST00000552943 SEPT9Q9UHD8 586 aaPredicted RBP21.32■■□□□ 1
WDR90-224ENST00000552943 I3L4J1 428 aa21.32■■□□□ 1
WDR90-224ENST00000552943 PFKFB3Q16875 520 aaPredicted RBP21.32■■□□□ 1
WDR90-224ENST00000552943 RSRC1Q96IZ7 334 aaKnown RBP21.32■■□□□ 1
WDR90-224ENST00000552943 TMEM206Q9H813 350 aa21.32■■□□□ 1
WDR90-224ENST00000552943 GBP1P32455 592 aa21.32■■□□□ 1
WDR90-224ENST00000552943 ZSCAN26Q16670 478 aa21.32■■□□□ 1
WDR90-224ENST00000552943 SULF1Q8IWU6 871 aa21.32■■□□□ 1
WDR90-224ENST00000552943 DCPSQ96C86 337 aaKnown RBP21.32■■□□□ 1
WDR90-224ENST00000552943 GPR101Q96P66 508 aaPredicted RBP21.32■■□□□ 1
WDR90-224ENST00000552943 HOMER3Q9NSC5 361 aa21.32■■□□□ 1
WDR90-224ENST00000552943 SNAP23O00161 211 aa21.32■■□□□ 1
WDR90-224ENST00000552943 CYP2D6P10635 497 aa21.32■■□□□ 1
WDR90-224ENST00000552943 PRDX5P30044 214 aa21.32■■□□□ 1
WDR90-224ENST00000552943 KRT81Q14533 505 aa21.32■■□□□ 1
WDR90-224ENST00000552943 TSGA10IPQ3SY00 556 aa21.32■■□□□ 1
WDR90-224ENST00000552943 EAPPQ56P03 285 aaPredicted RBP21.32■■□□□ 1
WDR90-224ENST00000552943 TYW1Q9NV66 732 aaKnown RBP21.32■■□□□ 1
WDR90-224ENST00000552943 LRRC63Q05C16 580 aa21.31■■□□□ 1
WDR90-224ENST00000552943 CPDO75976 1380 aa21.31■■□□□ 1
WDR90-224ENST00000552943 STX2P32856 288 aa21.31■■□□□ 1
WDR90-224ENST00000552943 CLEC17AQ6ZS10 378 aa21.31■■□□□ 1
WDR90-224ENST00000552943 PALM2Q8IXS6 379 aa21.31■■□□□ 1
WDR90-224ENST00000552943 KRT12Q99456 494 aa21.31■■□□□ 1
WDR90-224ENST00000552943 ATF7P17544 494 aaPredicted RBP21.31■■□□□ 1
WDR90-224ENST00000552943 SMC1BQ8NDV3 1235 aa21.31■■□□□ 1
WDR90-224ENST00000552943 VPS52Q8N1B4 723 aa21.31■■□□□ 1
WDR90-224ENST00000552943 ANKRD42Q8N9B4 389 aa21.31■■□□□ 1
WDR90-224ENST00000552943 CLIC2O15247 247 aa21.3■■□□□ 1
WDR90-224ENST00000552943 PHBP35232 272 aa21.3■■□□□ 1
WDR90-224ENST00000552943 ZNF131P52739 623 aa21.3■■□□□ 1
WDR90-224ENST00000552943 GEN1Q17RS7 908 aa21.3■■□□□ 1
WDR90-224ENST00000552943 RUNDC3BQ96NL0 473 aa21.3■■□□□ 1
WDR90-224ENST00000552943 MMS19Q96T76 1030 aa21.3■■□□□ 1
WDR90-224ENST00000552943 NHEJ1Q9H9Q4 299 aaPredicted RBP21.3■■□□□ 1
WDR90-224ENST00000552943 RNF40O75150 1001 aa21.3■■□□□ 1
WDR90-224ENST00000552943 KRT31Q15323 416 aa21.3■■□□□ 1
WDR90-224ENST00000552943 RABL6Q3YEC7 729 aaPredicted RBP21.3■■□□□ 1
WDR90-224ENST00000552943 CCDC62Q6P9F0 684 aa21.3■■□□□ 1
WDR90-224ENST00000552943 TRIM28Q13263 835 aaKnown RBP21.3■■□□□ 1
WDR90-224ENST00000552943 NEDD9Q14511 834 aa21.3■■□□□ 1
WDR90-224ENST00000552943 ANO3Q9BYT9 981 aa21.3■■□□□ 1
WDR90-224ENST00000552943 GOLPH3LQ9H4A5 285 aa21.3■■□□□ 1
WDR90-224ENST00000552943 PASKQ96RG2 1323 aa21.3■■□□□ 1
WDR90-224ENST00000552943 HGSO14964 777 aaPredicted RBP21.3■■□□□ 1
WDR90-224ENST00000552943 TMOD1P28289 359 aa21.3■■□□□ 1
WDR90-224ENST00000552943 ENAHQ8N8S7 591 aaPredicted RBP21.3■■□□□ 1
WDR90-224ENST00000552943 BBOF1Q8ND07 529 aa21.3■■□□□ 1
WDR90-224ENST00000552943 MGARPQ8TDB4 240 aa21.3■■□□□ 1
WDR90-224ENST00000552943 PDE11AQ9HCR9 933 aa21.3■■□□□ 1
WDR90-224ENST00000552943 PPRC1Q5VV67 1664 aaKnown RBP21.3■■□□□ 1
WDR90-224ENST00000552943 USP42Q9H9J4 1324 aaKnown RBP21.3■■□□□ 1
WDR90-224ENST00000552943 NDUFA10O95299 355 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms