RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 LRRC41Q15345 812 aa13.45□□□□□ -0.26
TRAFD1-209ENST00000552896 UBE2SQ16763 222 aa13.45□□□□□ -0.26
TRAFD1-209ENST00000552896 IQSEC1Q6DN90 963 aa13.45□□□□□ -0.26
TRAFD1-209ENST00000552896 NECAB2Q7Z6G3 386 aa13.45□□□□□ -0.26
TRAFD1-209ENST00000552896 RNF180Q86T96 592 aa13.45□□□□□ -0.26
TRAFD1-209ENST00000552896 TLK2Q86UE8 772 aa13.45□□□□□ -0.26
TRAFD1-209ENST00000552896 IL31RAQ8NI17 732 aa13.45□□□□□ -0.26
TRAFD1-209ENST00000552896 EHMT1Q9H9B1 1298 aa13.45□□□□□ -0.26
TRAFD1-209ENST00000552896 SH3GLB2Q9NR46 395 aa13.45□□□□□ -0.26
TRAFD1-209ENST00000552896 PDGFCQ9NRA1 345 aa13.45□□□□□ -0.26
TRAFD1-209ENST00000552896 GNEQ9Y223 722 aaKnown RBP13.45□□□□□ -0.26
TRAFD1-209ENST00000552896 LTBP2Q14767 1821 aa13.44□□□□□ -0.26
TRAFD1-209ENST00000552896 SPDYE3A6NKU9 549 aa13.44□□□□□ -0.26
TRAFD1-209ENST00000552896 NKRFO15226 690 aaKnown RBP eCLIP13.44□□□□□ -0.26
TRAFD1-209ENST00000552896 ST18O60284 1047 aa13.44□□□□□ -0.26
TRAFD1-209ENST00000552896 EIF3JO75822 258 aaKnown RBP13.44□□□□□ -0.26
TRAFD1-209ENST00000552896 STAM2O75886 525 aa13.44□□□□□ -0.26
TRAFD1-209ENST00000552896 PGK1P00558 417 aa13.44□□□□□ -0.26
TRAFD1-209ENST00000552896 SMPD1P17405 629 aa13.44□□□□□ -0.26
TRAFD1-209ENST00000552896 GJA9P57773 515 aa13.44□□□□□ -0.26
TRAFD1-209ENST00000552896 DUSP28Q4G0W2 176 aa13.44□□□□□ -0.26
TRAFD1-209ENST00000552896 PCNX4Q63HM2 1172 aa13.44□□□□□ -0.26
TRAFD1-209ENST00000552896 XRRA1Q6P2D8 792 aa13.44□□□□□ -0.26
TRAFD1-209ENST00000552896 PAWRQ96IZ0 340 aaKnown RBP13.44□□□□□ -0.26
TRAFD1-209ENST00000552896 WDR11Q9BZH6 1224 aa13.44□□□□□ -0.26
TRAFD1-209ENST00000552896 ZMYND12Q9H0C1 365 aa13.44□□□□□ -0.26
TRAFD1-209ENST00000552896 C11orf49Q9H6J7 331 aa13.44□□□□□ -0.26
TRAFD1-209ENST00000552896 SPC25Q9HBM1 224 aa13.44□□□□□ -0.26
TRAFD1-209ENST00000552896 LIMCH1Q9UPQ0 1083 aa13.44□□□□□ -0.26
TRAFD1-209ENST00000552896 Q9Y3F1 56 aa13.44□□□□□ -0.26
TRAFD1-209ENST00000552896 SMCO2A6NFE2 343 aa13.43□□□□□ -0.26
TRAFD1-209ENST00000552896 PPFIA3O75145 1194 aa13.43□□□□□ -0.26
TRAFD1-209ENST00000552896 FOSP01100 380 aaPredicted RBP13.43□□□□□ -0.26
TRAFD1-209ENST00000552896 CLK2P49760 499 aaKnown RBP13.43□□□□□ -0.26
TRAFD1-209ENST00000552896 TTLL4Q14679 1199 aa13.43□□□□□ -0.26
TRAFD1-209ENST00000552896 GJC2Q5T442 439 aaPredicted RBP13.43□□□□□ -0.26
TRAFD1-209ENST00000552896 MCTP2Q6DN12 878 aa13.43□□□□□ -0.26
TRAFD1-209ENST00000552896 VSIG10LQ86VR7 867 aa13.43□□□□□ -0.26
TRAFD1-209ENST00000552896 BICD2Q8TD16 824 aa13.43□□□□□ -0.26
TRAFD1-209ENST00000552896 ZSCAN31Q96LW9 406 aaPredicted RBP13.43□□□□□ -0.26
TRAFD1-209ENST00000552896 TSEN34Q9BSV6 310 aaKnown RBP13.43□□□□□ -0.26
TRAFD1-209ENST00000552896 HTATIP2Q9BUP3 242 aa13.43□□□□□ -0.26
TRAFD1-209ENST00000552896 C6orf50Q9HD87 102 aa13.43□□□□□ -0.26
TRAFD1-209ENST00000552896 SH2B1Q9NRF2 756 aaPredicted RBP13.43□□□□□ -0.26
TRAFD1-209ENST00000552896 PHF24Q9UPV7 400 aa13.43□□□□□ -0.26
TRAFD1-209ENST00000552896 MOXD2PA6NHM9 499 aa13.42□□□□□ -0.26
TRAFD1-209ENST00000552896 RGS20O76081 388 aa13.42□□□□□ -0.26
TRAFD1-209ENST00000552896 CTDNEP1O95476 244 aa13.42□□□□□ -0.26
TRAFD1-209ENST00000552896 C6orf222P0C671 652 aaPredicted RBP13.42□□□□□ -0.26
TRAFD1-209ENST00000552896 MYCLP12524 364 aaPredicted RBP13.42□□□□□ -0.26
TRAFD1-209ENST00000552896 GNA11P29992 359 aa13.42□□□□□ -0.26
TRAFD1-209ENST00000552896 ST3GAL1Q11201 340 aa13.42□□□□□ -0.26
TRAFD1-209ENST00000552896 GNPTABQ3T906 1256 aa13.42□□□□□ -0.26
TRAFD1-209ENST00000552896 CCDC62Q6P9F0 684 aa13.42□□□□□ -0.26
TRAFD1-209ENST00000552896 KCNV1Q6PIU1 500 aa13.42□□□□□ -0.26
TRAFD1-209ENST00000552896 REXO1Q8N1G1 1221 aaKnown RBP13.42□□□□□ -0.26
TRAFD1-209ENST00000552896 NECAB1Q8N987 351 aa13.42□□□□□ -0.26
TRAFD1-209ENST00000552896 NSUN7Q8NE18 718 aaKnown RBP13.42□□□□□ -0.26
TRAFD1-209ENST00000552896 KLHDC9Q8NEP7 349 aa13.42□□□□□ -0.26
TRAFD1-209ENST00000552896 INPP4AQ96PE3 977 aaPredicted RBP13.42□□□□□ -0.26
TRAFD1-209ENST00000552896 ANO3Q9BYT9 981 aa13.42□□□□□ -0.26
TRAFD1-209ENST00000552896 AP5M1Q9H0R1 490 aa13.42□□□□□ -0.26
TRAFD1-209ENST00000552896 VPS54Q9P1Q0 977 aa13.42□□□□□ -0.26
TRAFD1-209ENST00000552896 PCDHA6Q9UN73 950 aa13.42□□□□□ -0.26
TRAFD1-209ENST00000552896 PCDHA8Q9Y5H6 950 aa13.42□□□□□ -0.26
TRAFD1-209ENST00000552896 MYADML2A6NDP7 307 aa13.41□□□□□ -0.26
TRAFD1-209ENST00000552896 CTAGE5O15320 804 aa13.41□□□□□ -0.26
TRAFD1-209ENST00000552896 ARIH2O95376 493 aa13.41□□□□□ -0.26
TRAFD1-209ENST00000552896 TXNP10599 105 aaKnown RBP13.41□□□□□ -0.26
TRAFD1-209ENST00000552896 MRPS9P82933 396 aaKnown RBP13.41□□□□□ -0.26
TRAFD1-209ENST00000552896 FSCN1Q16658 493 aaKnown RBP13.41□□□□□ -0.26
TRAFD1-209ENST00000552896 CCSAPQ6IQ19 270 aaPredicted RBP13.41□□□□□ -0.26
TRAFD1-209ENST00000552896 SEPT14Q6ZU15 432 aa13.41□□□□□ -0.26
TRAFD1-209ENST00000552896 PCSK9Q8NBP7 692 aaKnown RBP13.41□□□□□ -0.26
TRAFD1-209ENST00000552896 DAGLBQ8NCG7 672 aa13.41□□□□□ -0.26
TRAFD1-209ENST00000552896 WASF1Q92558 559 aa13.41□□□□□ -0.26
TRAFD1-209ENST00000552896 ORC3Q9UBD5 711 aaPredicted RBP13.41□□□□□ -0.26
TRAFD1-209ENST00000552896 MRVI1Q9Y6F6 885 aa13.41□□□□□ -0.26
TRAFD1-209ENST00000552896 MYH9P35579 1960 aaKnown RBP13.41□□□□□ -0.26
TRAFD1-209ENST00000552896 A0A1W2PQ45 241 aaPredicted RBP13.4□□□□□ -0.26
TRAFD1-209ENST00000552896 A0A1W2PQY0 241 aa13.4□□□□□ -0.26
TRAFD1-209ENST00000552896 TGFB3P10600 412 aa13.4□□□□□ -0.26
TRAFD1-209ENST00000552896 XBP1P17861 261 aa13.4□□□□□ -0.26
TRAFD1-209ENST00000552896 SREBF1P36956 1147 aa13.4□□□□□ -0.26
TRAFD1-209ENST00000552896 CPT1AP50416 773 aa13.4□□□□□ -0.26
TRAFD1-209ENST00000552896 TMEM63BQ5T3F8 832 aa13.4□□□□□ -0.26
TRAFD1-209ENST00000552896 GALNT17Q6IS24 598 aa13.4□□□□□ -0.26
TRAFD1-209ENST00000552896 OR6J1Q8NGC5 347 aa13.4□□□□□ -0.26
TRAFD1-209ENST00000552896 EMID1Q96A84 441 aaPredicted RBP13.4□□□□□ -0.26
TRAFD1-209ENST00000552896 GPRASP2Q96D09 838 aa13.4□□□□□ -0.26
TRAFD1-209ENST00000552896 AIFM3Q96NN9 605 aa13.4□□□□□ -0.26
TRAFD1-209ENST00000552896 LLPHQ9BRT6 129 aaKnown RBP13.4□□□□□ -0.26
TRAFD1-209ENST00000552896 KAT6AQ92794 2004 aa13.4□□□□□ -0.26
TRAFD1-209ENST00000552896 TANC1Q9C0D5 1861 aa13.4□□□□□ -0.26
TRAFD1-209ENST00000552896 DYNC1LI2O43237 492 aaPredicted RBP13.39□□□□□ -0.27
TRAFD1-209ENST00000552896 FIBPO43427 364 aa13.39□□□□□ -0.27
TRAFD1-209ENST00000552896 ZEB2O60315 1214 aa13.39□□□□□ -0.27
TRAFD1-209ENST00000552896 GH1P01241 217 aa13.39□□□□□ -0.27
TRAFD1-209ENST00000552896 UBA1P22314 1058 aaKnown RBP13.39□□□□□ -0.27
TRAFD1-209ENST00000552896 PTGS1P23219 599 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms