RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 SLC38A10Q9HBR0 1119 aa11.1□□□□□ -0.63
TMEM116-216ENST00000552800 DISC1Q9NRI5 854 aa11.1□□□□□ -0.63
TMEM116-216ENST00000552800 ASTN2O75129 1339 aaPredicted RBP11.09□□□□□ -0.63
TMEM116-216ENST00000552800 AP5Z1O43299 807 aa11.09□□□□□ -0.63
TMEM116-216ENST00000552800 GRIN3BO60391 1043 aa11.09□□□□□ -0.63
TMEM116-216ENST00000552800 YBX3P16989 372 aaKnown RBP eCLIP11.09□□□□□ -0.63
TMEM116-216ENST00000552800 ATP2B1P20020 1258 aa11.09□□□□□ -0.63
TMEM116-216ENST00000552800 MUTP22033 750 aa11.09□□□□□ -0.63
TMEM116-216ENST00000552800 TXLNAP40222 546 aa11.09□□□□□ -0.63
TMEM116-216ENST00000552800 HSD17B4P51659 736 aa11.09□□□□□ -0.63
TMEM116-216ENST00000552800 LETM2Q2VYF4 491 aa11.09□□□□□ -0.63
TMEM116-216ENST00000552800 FAM83BQ5T0W9 1011 aa11.09□□□□□ -0.63
TMEM116-216ENST00000552800 JAKMIP3Q5VZ66 844 aa11.09□□□□□ -0.63
TMEM116-216ENST00000552800 PLA2G4DQ86XP0 818 aa11.09□□□□□ -0.63
TMEM116-216ENST00000552800 SLFN12Q8IYM2 578 aa11.09□□□□□ -0.63
TMEM116-216ENST00000552800 ENOX1Q8TC92 643 aaKnown RBP11.09□□□□□ -0.63
TMEM116-216ENST00000552800 LENG9Q96B70 501 aa11.09□□□□□ -0.63
TMEM116-216ENST00000552800 MRFAP1L1Q96HT8 127 aa11.09□□□□□ -0.63
TMEM116-216ENST00000552800 C7orf25Q9BPX7 421 aa11.09□□□□□ -0.63
TMEM116-216ENST00000552800 ANO3Q9BYT9 981 aa11.09□□□□□ -0.63
TMEM116-216ENST00000552800 RAB34Q9BZG1 259 aa11.09□□□□□ -0.63
TMEM116-216ENST00000552800 DNAJC25Q9H1X3 360 aa11.09□□□□□ -0.63
TMEM116-216ENST00000552800 TMEM260Q9NX78 707 aa11.09□□□□□ -0.63
TMEM116-216ENST00000552800 STK17AQ9UEE5 414 aa11.09□□□□□ -0.63
TMEM116-216ENST00000552800 CCDC39Q9UFE4 941 aa11.09□□□□□ -0.63
TMEM116-216ENST00000552800 AFG3L2Q9Y4W6 797 aa11.09□□□□□ -0.63
TMEM116-216ENST00000552800 FRMPD4Q14CM0 1322 aa11.09□□□□□ -0.63
TMEM116-216ENST00000552800 SSC5DA1L4H1 1573 aa11.08□□□□□ -0.64
TMEM116-216ENST00000552800 BCRP11274 1271 aa11.08□□□□□ -0.64
TMEM116-216ENST00000552800 INPP5BP32019 993 aa11.08□□□□□ -0.64
TMEM116-216ENST00000552800 UBA7P41226 1012 aa11.08□□□□□ -0.64
TMEM116-216ENST00000552800 PSEN2P49810 448 aa11.08□□□□□ -0.64
TMEM116-216ENST00000552800 PNOCQ13519 176 aa11.08□□□□□ -0.64
TMEM116-216ENST00000552800 CALCRLQ16602 461 aa11.08□□□□□ -0.64
TMEM116-216ENST00000552800 SPECC1Q5M775 1068 aa11.08□□□□□ -0.64
TMEM116-216ENST00000552800 C11orf57Q6ZUT1 292 aaPredicted RBP11.08□□□□□ -0.64
TMEM116-216ENST00000552800 NIPA1Q7RTP0 329 aa11.08□□□□□ -0.64
TMEM116-216ENST00000552800 RNF214Q8ND24 703 aa11.08□□□□□ -0.64
TMEM116-216ENST00000552800 REPS2Q8NFH8 660 aa11.08□□□□□ -0.64
TMEM116-216ENST00000552800 NUP88Q99567 741 aaPredicted RBP11.08□□□□□ -0.64
TMEM116-216ENST00000552800 SLF1Q9BQI6 1058 aa11.08□□□□□ -0.64
TMEM116-216ENST00000552800 GLIS2Q9BZE0 524 aaPredicted RBP11.08□□□□□ -0.64
TMEM116-216ENST00000552800 HSD3B7Q9H2F3 369 aa11.08□□□□□ -0.64
TMEM116-216ENST00000552800 DACH1Q9UI36 760 aa11.08□□□□□ -0.64
TMEM116-216ENST00000552800 MAN1B1Q9UKM7 699 aa11.08□□□□□ -0.64
TMEM116-216ENST00000552800 PPP1R9AQ9ULJ8 1098 aa11.08□□□□□ -0.64
TMEM116-216ENST00000552800 MTMR7Q9Y216 660 aa11.08□□□□□ -0.64
TMEM116-216ENST00000552800 IGLV3-22A0A075B6J6 115 aa11.07□□□□□ -0.64
TMEM116-216ENST00000552800 GLTPD2A6NH11 291 aa11.07□□□□□ -0.64
TMEM116-216ENST00000552800 LRRC10BA6NIK2 292 aa11.07□□□□□ -0.64
TMEM116-216ENST00000552800 USP17L15C9J2P7 530 aa11.07□□□□□ -0.64
TMEM116-216ENST00000552800 USP17L13C9JLJ4 530 aa11.07□□□□□ -0.64
TMEM116-216ENST00000552800 USP17L11C9JVI0 530 aa11.07□□□□□ -0.64
TMEM116-216ENST00000552800 USP17L18D6R9N7 530 aa11.07□□□□□ -0.64
TMEM116-216ENST00000552800 USP17L22D6RA61 530 aa11.07□□□□□ -0.64
TMEM116-216ENST00000552800 USP17L17D6RBQ6 530 aa11.07□□□□□ -0.64
TMEM116-216ENST00000552800 USP17L19D6RCP7 530 aa11.07□□□□□ -0.64
TMEM116-216ENST00000552800 USP17L20D6RJB6 530 aa11.07□□□□□ -0.64
TMEM116-216ENST00000552800 ARHGAP33O14559 1287 aa11.07□□□□□ -0.64
TMEM116-216ENST00000552800 DDNO94850 711 aaPredicted RBP11.07□□□□□ -0.64
TMEM116-216ENST00000552800 ADCY5O95622 1261 aa11.07□□□□□ -0.64
TMEM116-216ENST00000552800 TPM3P06753 285 aa11.07□□□□□ -0.64
TMEM116-216ENST00000552800 COL9A1P20849 921 aa11.07□□□□□ -0.64
TMEM116-216ENST00000552800 PPP1R2P41236 205 aa11.07□□□□□ -0.64
TMEM116-216ENST00000552800 ARHGAP4P98171 946 aa11.07□□□□□ -0.64
TMEM116-216ENST00000552800 SPIRE1Q08AE8 756 aa11.07□□□□□ -0.64
TMEM116-216ENST00000552800 USP17L24Q0WX57 530 aa11.07□□□□□ -0.64
TMEM116-216ENST00000552800 DPCR1Q3MIW9 517 aa11.07□□□□□ -0.64
TMEM116-216ENST00000552800 C9orf131Q5VYM1 1079 aa11.07□□□□□ -0.64
TMEM116-216ENST00000552800 XRRA1Q6P2D8 792 aa11.07□□□□□ -0.64
TMEM116-216ENST00000552800 USP17L6PQ6QN14 398 aa11.07□□□□□ -0.64
TMEM116-216ENST00000552800 B3GNT9Q6UX72 402 aa11.07□□□□□ -0.64
TMEM116-216ENST00000552800 LBX2Q6XYB7 198 aa11.07□□□□□ -0.64
TMEM116-216ENST00000552800 LUZP1Q86V48 1076 aa11.07□□□□□ -0.64
TMEM116-216ENST00000552800 LDHDQ86WU2 507 aa11.07□□□□□ -0.64
TMEM116-216ENST00000552800 MCF2L2Q86YR7 1114 aa11.07□□□□□ -0.64
TMEM116-216ENST00000552800 ETNPPLQ8TBG4 499 aa11.07□□□□□ -0.64
TMEM116-216ENST00000552800 CLEC4DQ8WXI8 215 aa11.07□□□□□ -0.64
TMEM116-216ENST00000552800 SMARCE1Q969G3 411 aa11.07□□□□□ -0.64
TMEM116-216ENST00000552800 DDX25Q9UHL0 483 aaKnown RBP11.07□□□□□ -0.64
TMEM116-216ENST00000552800 PCDHA12Q9UN75 941 aa11.07□□□□□ -0.64
TMEM116-216ENST00000552800 RPTORQ8N122 1335 aa11.07□□□□□ -0.64
TMEM116-216ENST00000552800 PVALEFA0A1B0GWK0 134 aa11.06□□□□□ -0.64
TMEM116-216ENST00000552800 GCOM1H8Y6P7 765 aaPredicted RBP11.06□□□□□ -0.64
TMEM116-216ENST00000552800 MEIS1O00470 390 aa11.06□□□□□ -0.64
TMEM116-216ENST00000552800 CXCL11O14625 94 aa11.06□□□□□ -0.64
TMEM116-216ENST00000552800 FOXN1O15353 648 aa11.06□□□□□ -0.64
TMEM116-216ENST00000552800 SLC37A4O43826 429 aa11.06□□□□□ -0.64
TMEM116-216ENST00000552800 RHOBTB3O94955 611 aa11.06□□□□□ -0.64
TMEM116-216ENST00000552800 TDP2O95551 362 aa11.06□□□□□ -0.64
TMEM116-216ENST00000552800 POLR2MP0CAP2 368 aa11.06□□□□□ -0.64
TMEM116-216ENST00000552800 ZNF18P17022 549 aa11.06□□□□□ -0.64
TMEM116-216ENST00000552800 VCAM1P19320 739 aa11.06□□□□□ -0.64
TMEM116-216ENST00000552800 LMOD1P29536 600 aaPredicted RBP11.06□□□□□ -0.64
TMEM116-216ENST00000552800 AMPD3Q01432 767 aa11.06□□□□□ -0.64
TMEM116-216ENST00000552800 CUL4BQ13620 913 aa11.06□□□□□ -0.64
TMEM116-216ENST00000552800 DHX8Q14562 1220 aaKnown RBP11.06□□□□□ -0.64
TMEM116-216ENST00000552800 COG2Q14746 738 aa11.06□□□□□ -0.64
TMEM116-216ENST00000552800 TKFCQ3LXA3 575 aa11.06□□□□□ -0.64
TMEM116-216ENST00000552800 TMEM119Q4V9L6 283 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms