RNA–Protein interactions for RNA: ENST00000552606.1

CCDC59-207, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-207ENST00000552606 SEPT4O43236 478 aa10.47□□□□□ -0.73
CCDC59-207ENST00000552606 RGS20O76081 388 aa10.47□□□□□ -0.73
CCDC59-207ENST00000552606 AP3B2Q13367 1082 aa10.47□□□□□ -0.73
CCDC59-207ENST00000552606 PRAMEF19Q5SWL8 479 aa10.47□□□□□ -0.73
CCDC59-207ENST00000552606 TAPT1Q6NXT6 567 aa10.47□□□□□ -0.73
CCDC59-207ENST00000552606 FCHSD1Q86WN1 690 aa10.47□□□□□ -0.73
CCDC59-207ENST00000552606 CRYGNQ8WXF5 182 aa10.47□□□□□ -0.73
CCDC59-207ENST00000552606 IWS1Q96ST2 819 aa10.47□□□□□ -0.73
CCDC59-207ENST00000552606 ALG1Q9BT22 464 aa10.47□□□□□ -0.73
CCDC59-207ENST00000552606 ANO3Q9BYT9 981 aa10.47□□□□□ -0.73
CCDC59-207ENST00000552606 GLT8D2Q9H1C3 349 aa10.47□□□□□ -0.73
CCDC59-207ENST00000552606 HMX1Q9NP08 348 aaPredicted RBP10.47□□□□□ -0.73
CCDC59-207ENST00000552606 VTA1Q9NP79 307 aa10.47□□□□□ -0.73
CCDC59-207ENST00000552606 GJB4Q9NTQ9 266 aa10.47□□□□□ -0.73
CCDC59-207ENST00000552606 TMEM260Q9NX78 707 aa10.47□□□□□ -0.73
CCDC59-207ENST00000552606 BIN2Q9UBW5 565 aaPredicted RBP10.47□□□□□ -0.73
CCDC59-207ENST00000552606 CNPY2Q9Y2B0 182 aa10.47□□□□□ -0.73
CCDC59-207ENST00000552606 MYH9P35579 1960 aaKnown RBP10.46□□□□□ -0.73
CCDC59-207ENST00000552606 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.46□□□□□ -0.73
CCDC59-207ENST00000552606 RBM47A0AV96 593 aaKnown RBP10.46□□□□□ -0.73
CCDC59-207ENST00000552606 K7ELQ4 463 aaPredicted RBP10.46□□□□□ -0.73
CCDC59-207ENST00000552606 MYCP01106 439 aaPredicted RBP10.46□□□□□ -0.73
CCDC59-207ENST00000552606 GJB1P08034 283 aa10.46□□□□□ -0.73
CCDC59-207ENST00000552606 NR3C2P08235 984 aa10.46□□□□□ -0.73
CCDC59-207ENST00000552606 SREBF1P36956 1147 aa10.46□□□□□ -0.73
CCDC59-207ENST00000552606 MRPL12P52815 198 aaKnown RBP10.46□□□□□ -0.73
CCDC59-207ENST00000552606 MRPS9P82933 396 aaKnown RBP10.46□□□□□ -0.73
CCDC59-207ENST00000552606 HMGN5P82970 282 aaKnown RBP10.46□□□□□ -0.73
CCDC59-207ENST00000552606 PDE4DQ08499 809 aa10.46□□□□□ -0.73
CCDC59-207ENST00000552606 MMRN1Q13201 1228 aa10.46□□□□□ -0.73
CCDC59-207ENST00000552606 ACVR2BQ13705 512 aa10.46□□□□□ -0.73
CCDC59-207ENST00000552606 ARHGEF16Q5VV41 709 aa10.46□□□□□ -0.73
CCDC59-207ENST00000552606 PCNX4Q63HM2 1172 aa10.46□□□□□ -0.73
CCDC59-207ENST00000552606 VSIG10LQ86VR7 867 aa10.46□□□□□ -0.73
CCDC59-207ENST00000552606 REXO1Q8N1G1 1221 aaKnown RBP10.46□□□□□ -0.73
CCDC59-207ENST00000552606 RASGRP4Q8TDF6 673 aa10.46□□□□□ -0.73
CCDC59-207ENST00000552606 WASF1Q92558 559 aa10.46□□□□□ -0.73
CCDC59-207ENST00000552606 TNFRSF25Q93038 417 aa10.46□□□□□ -0.73
CCDC59-207ENST00000552606 LENG1Q96BZ8 264 aaPredicted RBP10.46□□□□□ -0.73
CCDC59-207ENST00000552606 PGBD1Q96JS3 809 aa10.46□□□□□ -0.73
CCDC59-207ENST00000552606 CRISPLD2Q9H0B8 497 aa10.46□□□□□ -0.73
CCDC59-207ENST00000552606 RNF208Q9H0X6 261 aa10.46□□□□□ -0.73
CCDC59-207ENST00000552606 C6orf50Q9HD87 102 aa10.46□□□□□ -0.73
CCDC59-207ENST00000552606 DDX20Q9UHI6 824 aaKnown RBP10.46□□□□□ -0.73
CCDC59-207ENST00000552606 ZHX1Q9UKY1 873 aaPredicted RBP10.46□□□□□ -0.73
CCDC59-207ENST00000552606 PCDHA6Q9UN73 950 aa10.46□□□□□ -0.73
CCDC59-207ENST00000552606 PCDHA4Q9UN74 947 aa10.46□□□□□ -0.73
CCDC59-207ENST00000552606 KCNJ14Q9UNX9 436 aa10.46□□□□□ -0.73
CCDC59-207ENST00000552606 PCDHA8Q9Y5H6 950 aa10.46□□□□□ -0.73
CCDC59-207ENST00000552606 LTBP2Q14767 1821 aa10.45□□□□□ -0.74
CCDC59-207ENST00000552606 ARID2Q68CP9 1835 aa10.45□□□□□ -0.74
CCDC59-207ENST00000552606 SPDYE3A6NKU9 549 aa10.45□□□□□ -0.74
CCDC59-207ENST00000552606 MSCO60682 206 aa10.45□□□□□ -0.74
CCDC59-207ENST00000552606 ARIH2O95376 493 aa10.45□□□□□ -0.74
CCDC59-207ENST00000552606 FOSP01100 380 aaPredicted RBP10.45□□□□□ -0.74
CCDC59-207ENST00000552606 AKR1A1P14550 325 aa10.45□□□□□ -0.74
CCDC59-207ENST00000552606 GNA11P29992 359 aa10.45□□□□□ -0.74
CCDC59-207ENST00000552606 CCND2P30279 289 aa10.45□□□□□ -0.74
CCDC59-207ENST00000552606 ADCYAP1R1P41586 468 aa10.45□□□□□ -0.74
CCDC59-207ENST00000552606 GJA8P48165 433 aa10.45□□□□□ -0.74
CCDC59-207ENST00000552606 CCDC144BQ3MJ40 725 aa10.45□□□□□ -0.74
CCDC59-207ENST00000552606 TMEM63BQ5T3F8 832 aa10.45□□□□□ -0.74
CCDC59-207ENST00000552606 GALNT17Q6IS24 598 aa10.45□□□□□ -0.74
CCDC59-207ENST00000552606 EEPD1Q7L9B9 569 aa10.45□□□□□ -0.74
CCDC59-207ENST00000552606 U2AF1L4Q8WU68 220 aaKnown RBP10.45□□□□□ -0.74
CCDC59-207ENST00000552606 INPP4AQ96PE3 977 aaPredicted RBP10.45□□□□□ -0.74
CCDC59-207ENST00000552606 DEFB118Q96PH6 123 aa10.45□□□□□ -0.74
CCDC59-207ENST00000552606 MPHOSPH6Q99547 160 aaKnown RBP10.45□□□□□ -0.74
CCDC59-207ENST00000552606 PDGFCQ9NRA1 345 aa10.45□□□□□ -0.74
CCDC59-207ENST00000552606 OGDHLQ9ULD0 1010 aa10.45□□□□□ -0.74
CCDC59-207ENST00000552606 GNEQ9Y223 722 aaKnown RBP10.45□□□□□ -0.74
CCDC59-207ENST00000552606 MKI67P46013 3256 aaKnown RBP10.45□□□□□ -0.74
CCDC59-207ENST00000552606 SYNRGQ9UMZ2 1314 aa10.44□□□□□ -0.74
CCDC59-207ENST00000552606 B4DLN1 442 aa10.44□□□□□ -0.74
CCDC59-207ENST00000552606 EDIL3O43854 480 aa10.44□□□□□ -0.74
CCDC59-207ENST00000552606 ADAMTS4O75173 837 aa10.44□□□□□ -0.74
CCDC59-207ENST00000552606 SGPL1O95470 568 aa10.44□□□□□ -0.74
CCDC59-207ENST00000552606 MMP1P03956 469 aa10.44□□□□□ -0.74
CCDC59-207ENST00000552606 SMPD1P17405 629 aa10.44□□□□□ -0.74
CCDC59-207ENST00000552606 PTGS1P23219 599 aa10.44□□□□□ -0.74
CCDC59-207ENST00000552606 NLRP5P59047 1200 aa10.44□□□□□ -0.74
CCDC59-207ENST00000552606 SEMA3FQ13275 785 aa10.44□□□□□ -0.74
CCDC59-207ENST00000552606 STXBP2Q15833 593 aa10.44□□□□□ -0.74
CCDC59-207ENST00000552606 JAKMIP3Q5VZ66 844 aa10.44□□□□□ -0.74
CCDC59-207ENST00000552606 KRT40Q6A162 431 aa10.44□□□□□ -0.74
CCDC59-207ENST00000552606 XRRA1Q6P2D8 792 aa10.44□□□□□ -0.74
CCDC59-207ENST00000552606 CCDC62Q6P9F0 684 aa10.44□□□□□ -0.74
CCDC59-207ENST00000552606 BLIDQ8IZY5 108 aa10.44□□□□□ -0.74
CCDC59-207ENST00000552606 BICD2Q8TD16 824 aa10.44□□□□□ -0.74
CCDC59-207ENST00000552606 OXER1Q8TDS5 423 aa10.44□□□□□ -0.74
CCDC59-207ENST00000552606 UPF3AQ9H1J1 476 aaKnown RBP10.44□□□□□ -0.74
CCDC59-207ENST00000552606 PCDHB13Q9Y5F0 798 aa10.44□□□□□ -0.74
CCDC59-207ENST00000552606 TANC1Q9C0D5 1861 aa10.43□□□□□ -0.74
CCDC59-207ENST00000552606 CTAGE5O15320 804 aa10.43□□□□□ -0.74
CCDC59-207ENST00000552606 DUSP11O75319 330 aaKnown RBP10.43□□□□□ -0.74
CCDC59-207ENST00000552606 EIF3JO75822 258 aaKnown RBP10.43□□□□□ -0.74
CCDC59-207ENST00000552606 STAM2O75886 525 aa10.43□□□□□ -0.74
CCDC59-207ENST00000552606 CYP3A4P08684 503 aa10.43□□□□□ -0.74
CCDC59-207ENST00000552606 MYCLP12524 364 aaPredicted RBP10.43□□□□□ -0.74
CCDC59-207ENST00000552606 XBP1P17861 261 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms