RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 IGDCC4Q8TDY8 1250 aa6.17□□□□□ -1.42
USP44-207ENST00000552237 GIPC2Q8TF65 315 aa6.17□□□□□ -1.42
USP44-207ENST00000552237 CD248Q9HCU0 757 aa6.17□□□□□ -1.42
USP44-207ENST00000552237 NGRNQ9NPE2 291 aaKnown RBP6.17□□□□□ -1.42
USP44-207ENST00000552237 GPR42O15529 346 aa6.16□□□□□ -1.42
USP44-207ENST00000552237 SPDYAQ5MJ70 313 aa6.16□□□□□ -1.42
USP44-207ENST00000552237 PRR31Q5SQ13 230 aa6.16□□□□□ -1.42
USP44-207ENST00000552237 RUFY4Q6ZNE9 571 aa6.16□□□□□ -1.42
USP44-207ENST00000552237 SEC14L1Q92503 715 aa6.16□□□□□ -1.42
USP44-207ENST00000552237 SEMA4AQ9H3S1 761 aa6.16□□□□□ -1.42
USP44-207ENST00000552237 CGGBP1Q9UFW8 167 aaPredicted RBP6.16□□□□□ -1.42
USP44-207ENST00000552237 SUGT1Q9Y2Z0 365 aa6.16□□□□□ -1.42
USP44-207ENST00000552237 STAT5AP42229 794 aa6.15□□□□□ -1.42
USP44-207ENST00000552237 PPP2CBP62714 309 aa6.15□□□□□ -1.42
USP44-207ENST00000552237 PPP2CAP67775 309 aa6.15□□□□□ -1.42
USP44-207ENST00000552237 NKX3-2P78367 333 aa6.15□□□□□ -1.42
USP44-207ENST00000552237 ZNF326Q5BKZ1 582 aaKnown RBP6.15□□□□□ -1.42
USP44-207ENST00000552237 MILR1Q7Z6M3 343 aa6.15□□□□□ -1.42
USP44-207ENST00000552237 FAM126BQ8IXS8 530 aa6.15□□□□□ -1.42
USP44-207ENST00000552237 FGD4Q96M96 766 aa6.15□□□□□ -1.42
USP44-207ENST00000552237 ING1Q9UK53 422 aaPredicted RBP6.15□□□□□ -1.42
USP44-207ENST00000552237 SGSM2O43147 1006 aa6.14□□□□□ -1.43
USP44-207ENST00000552237 ZNF28P17035 718 aa6.14□□□□□ -1.43
USP44-207ENST00000552237 TGFB2P61812 414 aa6.14□□□□□ -1.43
USP44-207ENST00000552237 GRB10Q13322 594 aa6.14□□□□□ -1.43
USP44-207ENST00000552237 TEX2Q8IWB9 1127 aa6.14□□□□□ -1.43
USP44-207ENST00000552237 DNERQ8NFT8 737 aa6.14□□□□□ -1.43
USP44-207ENST00000552237 ZSWIM3Q96MP5 696 aa6.14□□□□□ -1.43
USP44-207ENST00000552237 CLIC6Q96NY7 704 aa6.14□□□□□ -1.43
USP44-207ENST00000552237 KLHL25Q9H0H3 589 aa6.14□□□□□ -1.43
USP44-207ENST00000552237 CLEC1BQ9P126 229 aa6.14□□□□□ -1.43
USP44-207ENST00000552237 PPT2Q9UMR5 302 aa6.14□□□□□ -1.43
USP44-207ENST00000552237 SLC12A7Q9Y666 1083 aa6.14□□□□□ -1.43
USP44-207ENST00000552237 C22orf46C9J442 243 aa6.13□□□□□ -1.43
USP44-207ENST00000552237 CYP7B1O75881 506 aa6.13□□□□□ -1.43
USP44-207ENST00000552237 THBDP07204 575 aa6.13□□□□□ -1.43
USP44-207ENST00000552237 EPHB4P54760 987 aa6.13□□□□□ -1.43
USP44-207ENST00000552237 FHL2Q14192 279 aa6.13□□□□□ -1.43
USP44-207ENST00000552237 SLFN13Q68D06 897 aa6.13□□□□□ -1.43
USP44-207ENST00000552237 KBTBD2Q8IY47 623 aa6.13□□□□□ -1.43
USP44-207ENST00000552237 RBBP8NLQ8NC74 664 aaPredicted RBP6.13□□□□□ -1.43
USP44-207ENST00000552237 PLEKHO2Q8TD55 490 aa6.13□□□□□ -1.43
USP44-207ENST00000552237 FTSJ1Q9UET6 329 aa6.13□□□□□ -1.43
USP44-207ENST00000552237 EPHX1P07099 455 aa6.12□□□□□ -1.43
USP44-207ENST00000552237 PLS3P13797 630 aa6.12□□□□□ -1.43
USP44-207ENST00000552237 IL13P35225 146 aa6.12□□□□□ -1.43
USP44-207ENST00000552237 SLC7A5Q01650 507 aa6.12□□□□□ -1.43
USP44-207ENST00000552237 CRBNQ96SW2 442 aa6.12□□□□□ -1.43
USP44-207ENST00000552237 PHAXQ9H814 394 aaKnown RBP6.12□□□□□ -1.43
USP44-207ENST00000552237 CROTQ9UKG9 612 aa6.12□□□□□ -1.43
USP44-207ENST00000552237 LTBP3Q9NS15 1303 aa6.11□□□□□ -1.43
USP44-207ENST00000552237 B4GALT4O60513 344 aa6.11□□□□□ -1.43
USP44-207ENST00000552237 ZNF623O75123 536 aa6.11□□□□□ -1.43
USP44-207ENST00000552237 SLC6A11P48066 632 aa6.11□□□□□ -1.43
USP44-207ENST00000552237 ADAM9Q13443 819 aa6.11□□□□□ -1.43
USP44-207ENST00000552237 HS1BP3Q53T59 392 aa6.11□□□□□ -1.43
USP44-207ENST00000552237 YTHDC1Q96MU7 727 aaKnown RBP6.11□□□□□ -1.43
USP44-207ENST00000552237 BARX1Q9HBU1 254 aaPredicted RBP6.11□□□□□ -1.43
USP44-207ENST00000552237 C11orf21Q9P2W6 132 aa6.11□□□□□ -1.43
USP44-207ENST00000552237 CCDC9Q9Y3X0 531 aaKnown RBP6.11□□□□□ -1.43
USP44-207ENST00000552237 PATE3B3GLJ2 98 aa6.1□□□□□ -1.43
USP44-207ENST00000552237 ZNF16P17020 682 aaPredicted RBP6.1□□□□□ -1.43
USP44-207ENST00000552237 R3HDM1Q15032 1099 aaKnown RBP6.1□□□□□ -1.43
USP44-207ENST00000552237 ARHGEF39Q8N4T4 335 aa6.1□□□□□ -1.43
USP44-207ENST00000552237 RCC1LQ96I51 464 aaKnown RBP6.1□□□□□ -1.43
USP44-207ENST00000552237 WRNIP1Q96S55 665 aa6.1□□□□□ -1.43
USP44-207ENST00000552237 MMP19Q99542 508 aa6.1□□□□□ -1.43
USP44-207ENST00000552237 PCDHB10Q9UN67 800 aa6.1□□□□□ -1.43
USP44-207ENST00000552237 ZDHHC9Q9Y397 364 aa6.1□□□□□ -1.43
USP44-207ENST00000552237 NPIPB8E9PQR5 432 aa6.09□□□□□ -1.43
USP44-207ENST00000552237 SCRN1Q12765 414 aa6.09□□□□□ -1.43
USP44-207ENST00000552237 CR1LQ2VPA4 569 aa6.09□□□□□ -1.43
USP44-207ENST00000552237 MROH9Q5TGP6 573 aa6.09□□□□□ -1.43
USP44-207ENST00000552237 MBLAC2Q68D91 279 aa6.09□□□□□ -1.43
USP44-207ENST00000552237 PKN3Q6P5Z2 889 aa6.09□□□□□ -1.43
USP44-207ENST00000552237 CRACR2BQ8N4Y2 399 aaPredicted RBP6.09□□□□□ -1.43
USP44-207ENST00000552237 DPF3Q92784 378 aa6.09□□□□□ -1.43
USP44-207ENST00000552237 MBD6Q96DN6 1003 aa6.09□□□□□ -1.43
USP44-207ENST00000552237 PTPN18Q99952 460 aa6.09□□□□□ -1.43
USP44-207ENST00000552237 GPRC5CQ9NQ84 441 aa6.09□□□□□ -1.43
USP44-207ENST00000552237 PODXL2Q9NZ53 605 aa6.09□□□□□ -1.43
USP44-207ENST00000552237 AKT3Q9Y243 479 aa6.09□□□□□ -1.43
USP44-207ENST00000552237 TESMINQ9Y4I5 508 aa6.09□□□□□ -1.43
USP44-207ENST00000552237 WDR33Q9C0J8 1336 aaKnown RBP6.08□□□□□ -1.44
USP44-207ENST00000552237 KCNH1O95259 989 aa6.08□□□□□ -1.44
USP44-207ENST00000552237 FPR2P25090 351 aa6.08□□□□□ -1.44
USP44-207ENST00000552237 RPL11P62913 178 aaKnown RBP6.08□□□□□ -1.44
USP44-207ENST00000552237 TRMT10BQ6PF06 316 aaKnown RBP6.08□□□□□ -1.44
USP44-207ENST00000552237 CCDC81Q6ZN84 652 aa6.08□□□□□ -1.44
USP44-207ENST00000552237 KLHL36Q8N4N3 616 aa6.08□□□□□ -1.44
USP44-207ENST00000552237 TMEM87AQ8NBN3 555 aa6.08□□□□□ -1.44
USP44-207ENST00000552237 TOE1Q96GM8 510 aaKnown RBP6.08□□□□□ -1.44
USP44-207ENST00000552237 WWC2-AS2Q96NR7 200 aa6.08□□□□□ -1.44
USP44-207ENST00000552237 MLLT6P55198 1093 aaPredicted RBP6.07□□□□□ -1.44
USP44-207ENST00000552237 ABHD18Q0P651 414 aa6.07□□□□□ -1.44
USP44-207ENST00000552237 MRPL58Q14197 206 aaKnown RBP6.07□□□□□ -1.44
USP44-207ENST00000552237 PRKD1Q15139 912 aaPredicted RBP6.07□□□□□ -1.44
USP44-207ENST00000552237 SMN1Q16637 294 aaKnown RBP6.07□□□□□ -1.44
USP44-207ENST00000552237 POMZP3Q6PJE2 187 aa6.07□□□□□ -1.44
USP44-207ENST00000552237 RIOX2Q8IUF8 465 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms