RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 TMEM240Q5SV17 173 aa5.33□□□□□ -1.56
LSM6P2-201ENST00000552208 OGFOD3Q6PK18 319 aa5.33□□□□□ -1.56
LSM6P2-201ENST00000552208 DGKHQ86XP1 1220 aa5.33□□□□□ -1.56
LSM6P2-201ENST00000552208 CPA6Q8N4T0 437 aa5.33□□□□□ -1.56
LSM6P2-201ENST00000552208 SAMD3Q8N6K7 520 aa5.33□□□□□ -1.56
LSM6P2-201ENST00000552208 USHBP1Q8N6Y0 703 aa5.33□□□□□ -1.56
LSM6P2-201ENST00000552208 LINC00116Q8NCU8 138 aa5.33□□□□□ -1.56
LSM6P2-201ENST00000552208 FBXO41Q8TF61 875 aa5.33□□□□□ -1.56
LSM6P2-201ENST00000552208 FBXW5Q969U6 566 aa5.33□□□□□ -1.56
LSM6P2-201ENST00000552208 AHCYL2Q96HN2 611 aaKnown RBP5.33□□□□□ -1.56
LSM6P2-201ENST00000552208 IPPKQ9H8X2 491 aa5.33□□□□□ -1.56
LSM6P2-201ENST00000552208 OXSMQ9NWU1 459 aa5.33□□□□□ -1.56
LSM6P2-201ENST00000552208 OBP2AQ9NY56 170 aa5.33□□□□□ -1.56
LSM6P2-201ENST00000552208 GOLGA6AQ9NYA3 693 aa5.33□□□□□ -1.56
LSM6P2-201ENST00000552208 IP6K2Q9UHH9 426 aa5.33□□□□□ -1.56
LSM6P2-201ENST00000552208 LUC7L2Q9Y383 392 aaKnown RBP5.33□□□□□ -1.56
LSM6P2-201ENST00000552208 C9orf172C9J069 976 aa5.32□□□□□ -1.56
LSM6P2-201ENST00000552208 FGF10O15520 208 aaPredicted RBP5.32□□□□□ -1.56
LSM6P2-201ENST00000552208 PLIN1O60240 522 aa5.32□□□□□ -1.56
LSM6P2-201ENST00000552208 KPNA1P52294 538 aaPredicted RBP5.32□□□□□ -1.56
LSM6P2-201ENST00000552208 HDAC1Q13547 482 aaPredicted RBP5.32□□□□□ -1.56
LSM6P2-201ENST00000552208 ADGRE1Q14246 886 aa5.32□□□□□ -1.56
LSM6P2-201ENST00000552208 PCBP2Q15366 365 aaKnown RBP eCLIP5.32□□□□□ -1.56
LSM6P2-201ENST00000552208 SYCP2LQ5T4T6 812 aa5.32□□□□□ -1.56
LSM6P2-201ENST00000552208 TPH2Q8IWU9 490 aa5.32□□□□□ -1.56
LSM6P2-201ENST00000552208 EFHBQ8N7U6 833 aa5.32□□□□□ -1.56
LSM6P2-201ENST00000552208 C1orf162Q8NEQ5 155 aaPredicted RBP5.32□□□□□ -1.56
LSM6P2-201ENST00000552208 SVIPQ8NHG7 77 aa5.32□□□□□ -1.56
LSM6P2-201ENST00000552208 GIMAP7Q8NHV1 300 aa5.32□□□□□ -1.56
LSM6P2-201ENST00000552208 SLC5A5Q92911 643 aa5.32□□□□□ -1.56
LSM6P2-201ENST00000552208 UTP4Q969X6 686 aaKnown RBP5.32□□□□□ -1.56
LSM6P2-201ENST00000552208 FAXDC2Q96IV6 333 aa5.32□□□□□ -1.56
LSM6P2-201ENST00000552208 MEGF10Q96KG7 1140 aa5.32□□□□□ -1.56
LSM6P2-201ENST00000552208 NACC1Q96RE7 527 aa5.32□□□□□ -1.56
LSM6P2-201ENST00000552208 GPATCH2Q9NW75 528 aa5.32□□□□□ -1.56
LSM6P2-201ENST00000552208 H2AFY2Q9P0M6 372 aaPredicted RBP5.32□□□□□ -1.56
LSM6P2-201ENST00000552208 PPARGC1AQ9UBK2 798 aaKnown RBP5.32□□□□□ -1.56
LSM6P2-201ENST00000552208 GTF2IRD1Q9UHL9 959 aa5.32□□□□□ -1.56
LSM6P2-201ENST00000552208 USP21Q9UK80 565 aa5.32□□□□□ -1.56
LSM6P2-201ENST00000552208 PNMA8BQ9ULN7 279 aaPredicted RBP5.32□□□□□ -1.56
LSM6P2-201ENST00000552208 CBLCQ9ULV8 474 aa5.32□□□□□ -1.56
LSM6P2-201ENST00000552208 TRIM75PA6NK02 468 aa5.31□□□□□ -1.56
LSM6P2-201ENST00000552208 FAM47E-STBD1D6RA91 191 aa5.31□□□□□ -1.56
LSM6P2-201ENST00000552208 GSTA4O15217 222 aa5.31□□□□□ -1.56
LSM6P2-201ENST00000552208 PCDHGA12O60330 932 aa5.31□□□□□ -1.56
LSM6P2-201ENST00000552208 ZBTB48P10074 688 aaPredicted RBP5.31□□□□□ -1.56
LSM6P2-201ENST00000552208 MYBL2P10244 700 aa5.31□□□□□ -1.56
LSM6P2-201ENST00000552208 PAMP19021 973 aa5.31□□□□□ -1.56
LSM6P2-201ENST00000552208 RXRBP28702 533 aa5.31□□□□□ -1.56
LSM6P2-201ENST00000552208 RECQLP46063 649 aaPredicted RBP5.31□□□□□ -1.56
LSM6P2-201ENST00000552208 TCIRG1Q13488 830 aa5.31□□□□□ -1.56
LSM6P2-201ENST00000552208 MBTPS1Q14703 1052 aa5.31□□□□□ -1.56
LSM6P2-201ENST00000552208 ODF1Q14990 250 aa5.31□□□□□ -1.56
LSM6P2-201ENST00000552208 NFKBIBQ15653 356 aa5.31□□□□□ -1.56
LSM6P2-201ENST00000552208 ARHGAP44Q17R89 818 aa5.31□□□□□ -1.56
LSM6P2-201ENST00000552208 CLEC16AQ2KHT3 1053 aa5.31□□□□□ -1.56
LSM6P2-201ENST00000552208 GAB4Q2WGN9 574 aa5.31□□□□□ -1.56
LSM6P2-201ENST00000552208 FAM47CQ5HY64 1035 aa5.31□□□□□ -1.56
LSM6P2-201ENST00000552208 PAOXQ6QHF9 649 aa5.31□□□□□ -1.56
LSM6P2-201ENST00000552208 C11orf74Q86VG3 221 aa5.31□□□□□ -1.56
LSM6P2-201ENST00000552208 TSPYL5Q86VY4 417 aaPredicted RBP5.31□□□□□ -1.56
LSM6P2-201ENST00000552208 KSR1Q8IVT5 923 aa5.31□□□□□ -1.56
LSM6P2-201ENST00000552208 MFSD4AQ8N468 514 aa5.31□□□□□ -1.56
LSM6P2-201ENST00000552208 FBXL7Q9UJT9 491 aa5.31□□□□□ -1.56
LSM6P2-201ENST00000552208 ANKRD6Q9Y2G4 727 aa5.31□□□□□ -1.56
LSM6P2-201ENST00000552208 PCDHGA9Q9Y5G4 932 aaKnown RBP5.31□□□□□ -1.56
LSM6P2-201ENST00000552208 PCDHGA8Q9Y5G5 932 aa5.31□□□□□ -1.56
LSM6P2-201ENST00000552208 PCDHGA7Q9Y5G6 932 aa5.31□□□□□ -1.56
LSM6P2-201ENST00000552208 PCDHGA6Q9Y5G7 932 aa5.31□□□□□ -1.56
LSM6P2-201ENST00000552208 PCDHGA3Q9Y5H0 932 aa5.31□□□□□ -1.56
LSM6P2-201ENST00000552208 PCDHGA2Q9Y5H1 932 aa5.31□□□□□ -1.56
LSM6P2-201ENST00000552208 PCDHA2Q9Y5H9 948 aa5.31□□□□□ -1.56
LSM6P2-201ENST00000552208 COMMD10Q9Y6G5 202 aa5.31□□□□□ -1.56
LSM6P2-201ENST00000552208 TRBV23OR9-2A0A075B6M9 112 aa5.3□□□□□ -1.56
LSM6P2-201ENST00000552208 NPHP3-ACAD11A0A0J9YXS1 232 aa5.3□□□□□ -1.56
LSM6P2-201ENST00000552208 VSTM5A8MXK1 200 aa5.3□□□□□ -1.56
LSM6P2-201ENST00000552208 ZNF561-AS1K7EIQ3 104 aa5.3□□□□□ -1.56
LSM6P2-201ENST00000552208 MT-CO1P00395 513 aa5.3□□□□□ -1.56
LSM6P2-201ENST00000552208 GSTM1P09488 218 aa5.3□□□□□ -1.56
LSM6P2-201ENST00000552208 U2AF1L5P0DN76 240 aaPredicted RBP5.3□□□□□ -1.56
LSM6P2-201ENST00000552208 TRIM27P14373 513 aa5.3□□□□□ -1.56
LSM6P2-201ENST00000552208 GRK2P25098 689 aa5.3□□□□□ -1.56
LSM6P2-201ENST00000552208 COL8A1P27658 744 aa5.3□□□□□ -1.56
LSM6P2-201ENST00000552208 TPP2P29144 1249 aaPredicted RBP5.3□□□□□ -1.56
LSM6P2-201ENST00000552208 ADMP35318 185 aa5.3□□□□□ -1.56
LSM6P2-201ENST00000552208 GRK3P35626 688 aa5.3□□□□□ -1.56
LSM6P2-201ENST00000552208 CEBPAP49715 358 aaPredicted RBP5.3□□□□□ -1.56
LSM6P2-201ENST00000552208 DNM2P50570 870 aa5.3□□□□□ -1.56
LSM6P2-201ENST00000552208 PHC1P78364 1004 aa5.3□□□□□ -1.56
LSM6P2-201ENST00000552208 U2AF1Q01081 240 aaKnown RBP eCLIP5.3□□□□□ -1.56
LSM6P2-201ENST00000552208 LRRC32Q14392 662 aa5.3□□□□□ -1.56
LSM6P2-201ENST00000552208 TERF2Q15554 542 aa5.3□□□□□ -1.56
LSM6P2-201ENST00000552208 VPS72Q15906 364 aa5.3□□□□□ -1.56
LSM6P2-201ENST00000552208 BROXQ5VW32 411 aa5.3□□□□□ -1.56
LSM6P2-201ENST00000552208 CYB5RLQ6IPT4 315 aa5.3□□□□□ -1.56
LSM6P2-201ENST00000552208 BEND4Q6ZU67 534 aa5.3□□□□□ -1.56
LSM6P2-201ENST00000552208 EPM2AIP1Q7L775 607 aaPredicted RBP5.3□□□□□ -1.56
LSM6P2-201ENST00000552208 HDGFL2Q7Z4V5 671 aaPredicted RBP5.3□□□□□ -1.56
LSM6P2-201ENST00000552208 CLEC10AQ8IUN9 316 aa5.3□□□□□ -1.56
LSM6P2-201ENST00000552208 CMTR2Q8IYT2 770 aaKnown RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms