RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 TNNI3KQ59H18 835 aa6.5□□□□□ -1.37
HOXB3-213ENST00000552000 TMEM67Q5HYA8 995 aa6.5□□□□□ -1.37
HOXB3-213ENST00000552000 LYPD8Q6UX82 237 aa6.5□□□□□ -1.37
HOXB3-213ENST00000552000 TMEM179Q6ZVK1 233 aa6.5□□□□□ -1.37
HOXB3-213ENST00000552000 SV2AQ7L0J3 742 aa6.5□□□□□ -1.37
HOXB3-213ENST00000552000 CERS3Q8IU89 383 aa6.5□□□□□ -1.37
HOXB3-213ENST00000552000 SIAH1Q8IUQ4 282 aa6.5□□□□□ -1.37
HOXB3-213ENST00000552000 ARNTL2Q8WYA1 636 aa6.5□□□□□ -1.37
HOXB3-213ENST00000552000 DDX11Q96FC9 970 aa6.5□□□□□ -1.37
HOXB3-213ENST00000552000 SCLYQ96I15 445 aa6.5□□□□□ -1.37
HOXB3-213ENST00000552000 NOC4LQ9BVI4 516 aaKnown RBP6.5□□□□□ -1.37
HOXB3-213ENST00000552000 TRPV6Q9H1D0 765 aa6.5□□□□□ -1.37
HOXB3-213ENST00000552000 UPF3AQ9H1J1 476 aaKnown RBP6.5□□□□□ -1.37
HOXB3-213ENST00000552000 WNT8AQ9H1J5 351 aa6.5□□□□□ -1.37
HOXB3-213ENST00000552000 VCPKMTQ9H867 229 aa6.5□□□□□ -1.37
HOXB3-213ENST00000552000 ARHGEF10LQ9HCE6 1279 aa6.5□□□□□ -1.37
HOXB3-213ENST00000552000 MCM9Q9NXL9 1143 aa6.5□□□□□ -1.37
HOXB3-213ENST00000552000 MAP10Q9P2G4 905 aa6.5□□□□□ -1.37
HOXB3-213ENST00000552000 FPGT-TNNI3KV9GXZ4 949 aa6.5□□□□□ -1.37
HOXB3-213ENST00000552000 VPS13AQ96RL7 3174 aa6.49□□□□□ -1.37
HOXB3-213ENST00000552000 VWA5AO00534 786 aa6.49□□□□□ -1.37
HOXB3-213ENST00000552000 MSTNO14793 375 aa6.49□□□□□ -1.37
HOXB3-213ENST00000552000 RAD21O60216 631 aa6.49□□□□□ -1.37
HOXB3-213ENST00000552000 SSTR3P32745 418 aaPredicted RBP6.49□□□□□ -1.37
HOXB3-213ENST00000552000 COPB2P35606 906 aa6.49□□□□□ -1.37
HOXB3-213ENST00000552000 TTLL4Q14679 1199 aa6.49□□□□□ -1.37
HOXB3-213ENST00000552000 CCDC144BQ3MJ40 725 aa6.49□□□□□ -1.37
HOXB3-213ENST00000552000 FAM83BQ5T0W9 1011 aa6.49□□□□□ -1.37
HOXB3-213ENST00000552000 CXCL17Q6UXB2 119 aa6.49□□□□□ -1.37
HOXB3-213ENST00000552000 MAMDC4Q6UXC1 1216 aa6.49□□□□□ -1.37
HOXB3-213ENST00000552000 NOL8Q76FK4 1167 aaKnown RBP6.49□□□□□ -1.37
HOXB3-213ENST00000552000 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.49□□□□□ -1.373e-6■■■■■ 37.6
HOXB3-213ENST00000552000 VASH1Q7L8A9 365 aaPredicted RBP6.49□□□□□ -1.37
HOXB3-213ENST00000552000 RPUSD2Q8IZ73 545 aaKnown RBP6.49□□□□□ -1.37
HOXB3-213ENST00000552000 VWA5B2Q8N398 1253 aa6.49□□□□□ -1.37
HOXB3-213ENST00000552000 MSL3Q8N5Y2 521 aaKnown RBP6.49□□□□□ -1.37
HOXB3-213ENST00000552000 REPS2Q8NFH8 660 aa6.49□□□□□ -1.37
HOXB3-213ENST00000552000 VWCEQ96DN2 955 aa6.49□□□□□ -1.37
HOXB3-213ENST00000552000 DYNLL2Q96FJ2 89 aa6.49□□□□□ -1.37
HOXB3-213ENST00000552000 SH2D4AQ9H788 454 aa6.49□□□□□ -1.37
HOXB3-213ENST00000552000 GPR108Q9NPR9 543 aa6.49□□□□□ -1.37
HOXB3-213ENST00000552000 TLR7Q9NYK1 1049 aaKnown RBP6.49□□□□□ -1.37
HOXB3-213ENST00000552000 ZNF214Q9UL59 606 aaPredicted RBP6.49□□□□□ -1.37
HOXB3-213ENST00000552000 PPP1R9AQ9ULJ8 1098 aa6.49□□□□□ -1.37
HOXB3-213ENST00000552000 ADAMTS5Q9UNA0 930 aa6.49□□□□□ -1.37
HOXB3-213ENST00000552000 TMX2Q9Y320 296 aa6.49□□□□□ -1.37
HOXB3-213ENST00000552000 MAGEB6P1A0A0J9YX57 407 aa6.48□□□□□ -1.37
HOXB3-213ENST00000552000 PRR33A8MZF0 331 aa6.48□□□□□ -1.37
HOXB3-213ENST00000552000 CTAGE5O15320 804 aa6.48□□□□□ -1.37
HOXB3-213ENST00000552000 B4GALT4O60513 344 aa6.48□□□□□ -1.37
HOXB3-213ENST00000552000 IGSF3O75054 1194 aa6.48□□□□□ -1.37
HOXB3-213ENST00000552000 GNAI2P04899 355 aa6.48□□□□□ -1.37
HOXB3-213ENST00000552000 NHLH1Q02575 133 aa6.48□□□□□ -1.37
HOXB3-213ENST00000552000 TAP1Q03518 808 aa6.48□□□□□ -1.37
HOXB3-213ENST00000552000 SLFN5Q08AF3 891 aa6.48□□□□□ -1.37
HOXB3-213ENST00000552000 GRB10Q13322 594 aa6.48□□□□□ -1.37
HOXB3-213ENST00000552000 ITGA7Q13683 1181 aa6.48□□□□□ -1.37
HOXB3-213ENST00000552000 SNRNP48Q6IEG0 339 aaKnown RBP6.48□□□□□ -1.37
HOXB3-213ENST00000552000 ARMCX2Q7L311 632 aa6.48□□□□□ -1.37
HOXB3-213ENST00000552000 SPRED2Q7Z698 418 aa6.48□□□□□ -1.37
HOXB3-213ENST00000552000 DEFB128Q7Z7B8 93 aa6.48□□□□□ -1.37
HOXB3-213ENST00000552000 CCDC116Q8IYX3 515 aa6.48□□□□□ -1.37
HOXB3-213ENST00000552000 GJD3Q8N144 294 aa6.48□□□□□ -1.37
HOXB3-213ENST00000552000 SLC43A3Q8NBI5 491 aa6.48□□□□□ -1.37
HOXB3-213ENST00000552000 ZNF512BQ96KM6 892 aaPredicted RBP6.48□□□□□ -1.37
HOXB3-213ENST00000552000 FGD4Q96M96 766 aa6.48□□□□□ -1.37
HOXB3-213ENST00000552000 RIOK1Q9BRS2 568 aaKnown RBP6.48□□□□□ -1.37
HOXB3-213ENST00000552000 TEX13BQ9BXU2 312 aa6.48□□□□□ -1.37
HOXB3-213ENST00000552000 CRNKL1Q9BZJ0 848 aaKnown RBP6.48□□□□□ -1.37
HOXB3-213ENST00000552000 CCDC8Q9H0W5 538 aaPredicted RBP6.48□□□□□ -1.37
HOXB3-213ENST00000552000 ABHD16BQ9H3Z7 469 aa6.48□□□□□ -1.37
HOXB3-213ENST00000552000 ANTXR1Q9H6X2 564 aa6.48□□□□□ -1.37
HOXB3-213ENST00000552000 DBNLQ9UJU6 430 aaKnown RBP6.48□□□□□ -1.37
HOXB3-213ENST00000552000 RIPK3Q9Y572 518 aa6.48□□□□□ -1.37
HOXB3-213ENST00000552000 ASTN1O14525 1302 aa6.48□□□□□ -1.37
HOXB3-213ENST00000552000 GRIN2DO15399 1336 aa6.48□□□□□ -1.37
HOXB3-213ENST00000552000 ZNF292O60281 2723 aa6.48□□□□□ -1.37
HOXB3-213ENST00000552000 SCN10AQ9Y5Y9 1956 aa6.48□□□□□ -1.37
HOXB3-213ENST00000552000 PTPRSQ13332 1948 aa6.47□□□□□ -1.37
HOXB3-213ENST00000552000 MYH4Q9Y623 1939 aa6.47□□□□□ -1.37
HOXB3-213ENST00000552000 DNAJC25-GNG10A0A024R161 153 aa6.47□□□□□ -1.37
HOXB3-213ENST00000552000 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.47□□□□□ -1.37
HOXB3-213ENST00000552000 LPXNO60711 386 aa6.47□□□□□ -1.37
HOXB3-213ENST00000552000 ADAM23O75077 832 aa6.47□□□□□ -1.37
HOXB3-213ENST00000552000 CABYRO75952 493 aa6.47□□□□□ -1.37
HOXB3-213ENST00000552000 EEF2P13639 858 aaKnown RBP6.47□□□□□ -1.37
HOXB3-213ENST00000552000 PTGS1P23219 599 aa6.47□□□□□ -1.37
HOXB3-213ENST00000552000 PSMC6P62333 389 aa6.47□□□□□ -1.37
HOXB3-213ENST00000552000 FSCN1Q16658 493 aaKnown RBP6.47□□□□□ -1.37
HOXB3-213ENST00000552000 CSPP1Q1MSJ5 1256 aa6.47□□□□□ -1.37
HOXB3-213ENST00000552000 C4orf48Q5BLP8 95 aa6.47□□□□□ -1.37
HOXB3-213ENST00000552000 CCDC144CPQ8IYA2 1237 aa6.47□□□□□ -1.37
HOXB3-213ENST00000552000 CPXCR1Q8N123 301 aa6.47□□□□□ -1.37
HOXB3-213ENST00000552000 SDR42E1Q8WUS8 393 aa6.47□□□□□ -1.37
HOXB3-213ENST00000552000 FBXL18Q96ME1 805 aa6.47□□□□□ -1.37
HOXB3-213ENST00000552000 AGBL1Q96MI9 1066 aa6.47□□□□□ -1.37
HOXB3-213ENST00000552000 NUP88Q99567 741 aaPredicted RBP6.47□□□□□ -1.37
HOXB3-213ENST00000552000 SLF1Q9BQI6 1058 aa6.47□□□□□ -1.37
HOXB3-213ENST00000552000 DCP1AQ9NPI6 582 aaPredicted RBP6.47□□□□□ -1.37
HOXB3-213ENST00000552000 SWAP70Q9UH65 585 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms