RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 FBXO11Q86XK2 927 aa20.9■□□□□ 0.94
PRPF40B-215ENST00000551418 YTHDC1Q96MU7 727 aaKnown RBP20.9■□□□□ 0.94
PRPF40B-215ENST00000551418 DSCC1Q9BVC3 393 aa20.9■□□□□ 0.94
PRPF40B-215ENST00000551418 DDX41Q9UJV9 622 aaKnown RBP20.9■□□□□ 0.94
PRPF40B-215ENST00000551418 MUC3AQ02505 3323 aa20.9■□□□□ 0.94
PRPF40B-215ENST00000551418 B4DLN1 442 aa20.89■□□□□ 0.93
PRPF40B-215ENST00000551418 PARP1P09874 1014 aaKnown RBP20.89■□□□□ 0.93
PRPF40B-215ENST00000551418 RFC2P35250 354 aa20.89■□□□□ 0.93
PRPF40B-215ENST00000551418 MRPL12P52815 198 aaKnown RBP20.89■□□□□ 0.93
PRPF40B-215ENST00000551418 MRPS5P82675 430 aaKnown RBP20.89■□□□□ 0.93
PRPF40B-215ENST00000551418 TFF2Q03403 129 aa20.89■□□□□ 0.93
PRPF40B-215ENST00000551418 STXBP2Q15833 593 aa20.89■□□□□ 0.93
PRPF40B-215ENST00000551418 CCDC178Q5BJE1 867 aa20.89■□□□□ 0.93
PRPF40B-215ENST00000551418 CYB5R4Q7L1T6 521 aa20.89■□□□□ 0.93
PRPF40B-215ENST00000551418 ADAMTS19Q8TE59 1207 aa20.89■□□□□ 0.93
PRPF40B-215ENST00000551418 ZFP91Q96JP5 570 aaPredicted RBP20.89■□□□□ 0.93
PRPF40B-215ENST00000551418 NECAB3Q96P71 396 aaPredicted RBP20.89■□□□□ 0.93
PRPF40B-215ENST00000551418 NOD1Q9Y239 953 aa20.89■□□□□ 0.93
PRPF40B-215ENST00000551418 TRANK1O15050 2925 aa20.89■□□□□ 0.93
PRPF40B-215ENST00000551418 BAZ2BQ9UIF8 2168 aaKnown RBP20.89■□□□□ 0.93
PRPF40B-215ENST00000551418 SORBS3O60504 671 aa20.88■□□□□ 0.93
PRPF40B-215ENST00000551418 CFBP00751 764 aa20.88■□□□□ 0.93
PRPF40B-215ENST00000551418 NR3C2P08235 984 aa20.88■□□□□ 0.93
PRPF40B-215ENST00000551418 ACTN1P12814 892 aa20.88■□□□□ 0.93
PRPF40B-215ENST00000551418 TAP1Q03518 808 aa20.88■□□□□ 0.93
PRPF40B-215ENST00000551418 SEC23AQ15436 765 aa20.88■□□□□ 0.93
PRPF40B-215ENST00000551418 IMMTQ16891 758 aaKnown RBP20.88■□□□□ 0.93
PRPF40B-215ENST00000551418 ARHGEF16Q5VV41 709 aa20.88■□□□□ 0.93
PRPF40B-215ENST00000551418 HERC6Q8IVU3 1022 aa20.88■□□□□ 0.93
PRPF40B-215ENST00000551418 IWS1Q96ST2 819 aa20.88■□□□□ 0.93
PRPF40B-215ENST00000551418 HDAC6Q9UBN7 1215 aa20.88■□□□□ 0.93
PRPF40B-215ENST00000551418 MRPL11Q9Y3B7 192 aaKnown RBP20.88■□□□□ 0.93
PRPF40B-215ENST00000551418 MTCH2Q9Y6C9 303 aa20.88■□□□□ 0.93
PRPF40B-215ENST00000551418 RGS20O76081 388 aa20.87■□□□□ 0.93
PRPF40B-215ENST00000551418 ZNF200P98182 395 aaPredicted RBP20.87■□□□□ 0.93
PRPF40B-215ENST00000551418 BFSP2Q13515 415 aa20.87■□□□□ 0.93
PRPF40B-215ENST00000551418 AAMPQ13685 434 aa20.87■□□□□ 0.93
PRPF40B-215ENST00000551418 MCF2L2Q86YR7 1114 aa20.87■□□□□ 0.93
PRPF40B-215ENST00000551418 WNT8BQ93098 351 aa20.87■□□□□ 0.93
PRPF40B-215ENST00000551418 ALG1Q9BT22 464 aa20.87■□□□□ 0.93
PRPF40B-215ENST00000551418 PXMP2Q9NR77 195 aa20.87■□□□□ 0.93
PRPF40B-215ENST00000551418 NCOR1O75376 2440 aa20.86■□□□□ 0.93
PRPF40B-215ENST00000551418 LCHNA4D1U4 455 aa20.86■□□□□ 0.93
PRPF40B-215ENST00000551418 ZNF286BP0CG31 522 aa20.86■□□□□ 0.93
PRPF40B-215ENST00000551418 PDE4AP27815 886 aa20.86■□□□□ 0.93
PRPF40B-215ENST00000551418 HIC1Q14526 733 aa20.86■□□□□ 0.93
PRPF40B-215ENST00000551418 SESTD1Q86VW0 696 aa20.86■□□□□ 0.93
PRPF40B-215ENST00000551418 IL31RAQ8NI17 732 aa20.86■□□□□ 0.93
PRPF40B-215ENST00000551418 ARNTL2Q8WYA1 636 aa20.86■□□□□ 0.93
PRPF40B-215ENST00000551418 SLC9A7Q96T83 725 aa20.86■□□□□ 0.93
PRPF40B-215ENST00000551418 KRT23Q9C075 422 aa20.86■□□□□ 0.93
PRPF40B-215ENST00000551418 SENP2Q9HC62 589 aa20.86■□□□□ 0.93
PRPF40B-215ENST00000551418 MAD2L2Q9UI95 211 aa20.86■□□□□ 0.93
PRPF40B-215ENST00000551418 KLRF2D3W0D1 207 aa20.85■□□□□ 0.93
PRPF40B-215ENST00000551418 NBNO60934 754 aa20.85■□□□□ 0.93
PRPF40B-215ENST00000551418 EIF3JO75822 258 aaKnown RBP20.85■□□□□ 0.93
PRPF40B-215ENST00000551418 CASTP20810 708 aaKnown RBP20.85■□□□□ 0.93
PRPF40B-215ENST00000551418 HOXA13P31271 388 aaPredicted RBP20.85■□□□□ 0.93
PRPF40B-215ENST00000551418 PSEN2P49810 448 aa20.85■□□□□ 0.93
PRPF40B-215ENST00000551418 HSD17B4P51659 736 aa20.85■□□□□ 0.93
PRPF40B-215ENST00000551418 IFIT1BQ5T764 474 aaKnown RBP20.85■□□□□ 0.93
PRPF40B-215ENST00000551418 PHOSPHO2Q8TCD6 241 aa20.85■□□□□ 0.93
PRPF40B-215ENST00000551418 GPKOWQ92917 476 aaPredicted RBP eCLIP20.85■□□□□ 0.93
PRPF40B-215ENST00000551418 MTMR8Q96EF0 704 aa20.85■□□□□ 0.93
PRPF40B-215ENST00000551418 UBAC1Q9BSL1 405 aa20.85■□□□□ 0.93
PRPF40B-215ENST00000551418 BCAS3Q9H6U6 928 aa20.85■□□□□ 0.93
PRPF40B-215ENST00000551418 RAPGEFL1Q9UHV5 662 aa20.85■□□□□ 0.93
PRPF40B-215ENST00000551418 CTNNA3Q9UI47 895 aa20.85■□□□□ 0.93
PRPF40B-215ENST00000551418 TAF6LQ9Y6J9 622 aa20.85■□□□□ 0.93
PRPF40B-215ENST00000551418 HIP1O00291 1037 aa20.84■□□□□ 0.93
PRPF40B-215ENST00000551418 MYCLP12524 364 aaPredicted RBP20.84■□□□□ 0.93
PRPF40B-215ENST00000551418 BMP1P13497 986 aa20.84■□□□□ 0.93
PRPF40B-215ENST00000551418 SELPP16109 830 aa20.84■□□□□ 0.93
PRPF40B-215ENST00000551418 KCNQ1P51787 676 aa20.84■□□□□ 0.93
PRPF40B-215ENST00000551418 DEFB103AP81534 67 aa20.84■□□□□ 0.93
PRPF40B-215ENST00000551418 SP2Q02086 613 aa20.84■□□□□ 0.93
PRPF40B-215ENST00000551418 DGKDQ16760 1214 aa20.84■□□□□ 0.93
PRPF40B-215ENST00000551418 TRAF7Q6Q0C0 670 aa20.84■□□□□ 0.93
PRPF40B-215ENST00000551418 LRRC8DQ7L1W4 858 aa20.84■□□□□ 0.93
PRPF40B-215ENST00000551418 AFAP1L1Q8TED9 768 aa20.84■□□□□ 0.93
PRPF40B-215ENST00000551418 UHRF1Q96T88 793 aaPredicted RBP20.84■□□□□ 0.93
PRPF40B-215ENST00000551418 AMNQ9BXJ7 453 aa20.84■□□□□ 0.93
PRPF40B-215ENST00000551418 MAF1Q9H063 256 aa20.84■□□□□ 0.93
PRPF40B-215ENST00000551418 GTF2IRD1Q9UHL9 959 aa20.84■□□□□ 0.93
PRPF40B-215ENST00000551418 MRVI1Q9Y6F6 885 aa20.84■□□□□ 0.93
PRPF40B-215ENST00000551418 PALM3A6NDB9 673 aaPredicted RBP20.83■□□□□ 0.93
PRPF40B-215ENST00000551418 HAS3O00219 553 aa20.83■□□□□ 0.93
PRPF40B-215ENST00000551418 CKBP12277 381 aa20.83■□□□□ 0.93
PRPF40B-215ENST00000551418 GSPT1P15170 499 aaKnown RBP20.83■□□□□ 0.93
PRPF40B-215ENST00000551418 POU3F3P20264 500 aaPredicted RBP20.83■□□□□ 0.93
PRPF40B-215ENST00000551418 NT5C2P49902 561 aa20.83■□□□□ 0.93
PRPF40B-215ENST00000551418 WDR5P61964 334 aaKnown RBP20.83■□□□□ 0.93
PRPF40B-215ENST00000551418 PTH1RQ03431 593 aa20.83■□□□□ 0.93
PRPF40B-215ENST00000551418 MFSD10Q14728 455 aa20.83■□□□□ 0.93
PRPF40B-215ENST00000551418 TRIM71Q2Q1W2 868 aaKnown RBP20.83■□□□□ 0.93
PRPF40B-215ENST00000551418 CAGE1Q8TC20 777 aa20.83■□□□□ 0.93
PRPF40B-215ENST00000551418 EMID1Q96A84 441 aaPredicted RBP20.83■□□□□ 0.93
PRPF40B-215ENST00000551418 PDCD2LQ9BRP1 358 aa20.83■□□□□ 0.93
PRPF40B-215ENST00000551418 PCDHA1Q9Y5I3 950 aa20.83■□□□□ 0.93
PRPF40B-215ENST00000551418 BDP1A6H8Y1 2624 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms