RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 MARCKSP29966 332 aaPredicted RBP11.78□□□□□ -0.52
NEK3-203ENST00000551355 GRM1Q13255 1194 aa11.78□□□□□ -0.52
NEK3-203ENST00000551355 PGM5Q15124 567 aa11.78□□□□□ -0.52
NEK3-203ENST00000551355 WDR78Q5VTH9 848 aa11.78□□□□□ -0.52
NEK3-203ENST00000551355 VSIG10LQ86VR7 867 aa11.78□□□□□ -0.52
NEK3-203ENST00000551355 FAM133AQ8N9E0 248 aa11.78□□□□□ -0.52
NEK3-203ENST00000551355 CDHR1Q96JP9 859 aa11.78□□□□□ -0.52
NEK3-203ENST00000551355 MTMR9Q96QG7 549 aa11.78□□□□□ -0.52
NEK3-203ENST00000551355 TAAR1Q96RJ0 339 aa11.78□□□□□ -0.52
NEK3-203ENST00000551355 PDCD2LQ9BRP1 358 aa11.78□□□□□ -0.52
NEK3-203ENST00000551355 PYM1Q9BRP8 204 aaKnown RBP11.78□□□□□ -0.52
NEK3-203ENST00000551355 ANP32EQ9BTT0 268 aa11.78□□□□□ -0.52
NEK3-203ENST00000551355 COL20A1Q9P218 1284 aa11.78□□□□□ -0.52
NEK3-203ENST00000551355 FBXO2Q9UK22 296 aaPredicted RBP11.78□□□□□ -0.52
NEK3-203ENST00000551355 DIS3Q9Y2L1 958 aaKnown RBP11.78□□□□□ -0.52
NEK3-203ENST00000551355 DDX49Q9Y6V7 483 aaKnown RBP11.78□□□□□ -0.52
NEK3-203ENST00000551355 SLC15A5A6NIM6 579 aa11.77□□□□□ -0.53
NEK3-203ENST00000551355 ASB14A6NK59 587 aa11.77□□□□□ -0.53
NEK3-203ENST00000551355 MEIS1O00470 390 aa11.77□□□□□ -0.53
NEK3-203ENST00000551355 SLC26A4O43511 780 aa11.77□□□□□ -0.53
NEK3-203ENST00000551355 TDP2O95551 362 aa11.77□□□□□ -0.53
NEK3-203ENST00000551355 NR3C2P08235 984 aa11.77□□□□□ -0.53
NEK3-203ENST00000551355 EIF2AK2P19525 551 aaKnown RBP11.77□□□□□ -0.53
NEK3-203ENST00000551355 TXLNAP40222 546 aa11.77□□□□□ -0.53
NEK3-203ENST00000551355 FXR2P51116 673 aaKnown RBP eCLIP11.77□□□□□ -0.53
NEK3-203ENST00000551355 CRHR2Q13324 411 aa11.77□□□□□ -0.53
NEK3-203ENST00000551355 PDIA5Q14554 519 aa11.77□□□□□ -0.53
NEK3-203ENST00000551355 STXBP2Q15833 593 aa11.77□□□□□ -0.53
NEK3-203ENST00000551355 KLHL40Q2TBA0 621 aa11.77□□□□□ -0.53
NEK3-203ENST00000551355 GNPTABQ3T906 1256 aa11.77□□□□□ -0.53
NEK3-203ENST00000551355 PRR16Q569H4 304 aa11.77□□□□□ -0.53
NEK3-203ENST00000551355 AXDND1Q5T1B0 1012 aaPredicted RBP11.77□□□□□ -0.53
NEK3-203ENST00000551355 CCDC73Q6ZRK6 1079 aa11.77□□□□□ -0.53
NEK3-203ENST00000551355 PLEKHH3Q7Z736 793 aa11.77□□□□□ -0.53
NEK3-203ENST00000551355 ZNF467Q7Z7K2 595 aaPredicted RBP11.77□□□□□ -0.53
NEK3-203ENST00000551355 NLRX1Q86UT6 975 aa11.77□□□□□ -0.53
NEK3-203ENST00000551355 MRPS27Q92552 414 aaKnown RBP11.77□□□□□ -0.53
NEK3-203ENST00000551355 SYAP1Q96A49 352 aaPredicted RBP11.77□□□□□ -0.53
NEK3-203ENST00000551355 MXRA8Q9BRK3 442 aa11.77□□□□□ -0.53
NEK3-203ENST00000551355 PORCNQ9H237 461 aa11.77□□□□□ -0.53
NEK3-203ENST00000551355 EFCC1Q9HA90 598 aa11.77□□□□□ -0.53
NEK3-203ENST00000551355 KCNMB3Q9NPA1 279 aa11.77□□□□□ -0.53
NEK3-203ENST00000551355 JADE2Q9NQC1 790 aa11.77□□□□□ -0.53
NEK3-203ENST00000551355 FAM13BQ9NYF5 915 aa11.77□□□□□ -0.53
NEK3-203ENST00000551355 CPA4Q9UI42 421 aa11.77□□□□□ -0.53
NEK3-203ENST00000551355 FAM86B1E9PN63 330 aa11.76□□□□□ -0.53
NEK3-203ENST00000551355 WNT7AO00755 349 aa11.76□□□□□ -0.53
NEK3-203ENST00000551355 SLC37A4O43826 429 aa11.76□□□□□ -0.53
NEK3-203ENST00000551355 EDIL3O43854 480 aa11.76□□□□□ -0.53
NEK3-203ENST00000551355 TRAK2O60296 914 aa11.76□□□□□ -0.53
NEK3-203ENST00000551355 EIF3JO75822 258 aaKnown RBP11.76□□□□□ -0.53
NEK3-203ENST00000551355 FAM86B2P0C5J1 330 aa11.76□□□□□ -0.53
NEK3-203ENST00000551355 ALDH5A1P51649 535 aaPredicted RBP11.76□□□□□ -0.53
NEK3-203ENST00000551355 GRB14Q14449 540 aa11.76□□□□□ -0.53
NEK3-203ENST00000551355 RESP18Q5W5W9 173 aa11.76□□□□□ -0.53
NEK3-203ENST00000551355 GPR142Q7Z601 462 aa11.76□□□□□ -0.53
NEK3-203ENST00000551355 PLA2G4DQ86XP0 818 aa11.76□□□□□ -0.53
NEK3-203ENST00000551355 MSL3Q8N5Y2 521 aaKnown RBP11.76□□□□□ -0.53
NEK3-203ENST00000551355 GPRASP2Q96D09 838 aa11.76□□□□□ -0.53
NEK3-203ENST00000551355 CCDC34Q96HJ3 373 aa11.76□□□□□ -0.53
NEK3-203ENST00000551355 PCDHA12Q9UN75 941 aa11.76□□□□□ -0.53
NEK3-203ENST00000551355 UBIAD1Q9Y5Z9 338 aa11.76□□□□□ -0.53
NEK3-203ENST00000551355 IGLV3-22A0A075B6J6 115 aa11.75□□□□□ -0.53
NEK3-203ENST00000551355 FAM237AA0A1B0GTK4 181 aa11.75□□□□□ -0.53
NEK3-203ENST00000551355 VWA3AA6NCI4 1184 aa11.75□□□□□ -0.53
NEK3-203ENST00000551355 PEX10O60683 326 aa11.75□□□□□ -0.53
NEK3-203ENST00000551355 AOC2O75106 756 aa11.75□□□□□ -0.53
NEK3-203ENST00000551355 GADD45BO75293 160 aaPredicted RBP11.75□□□□□ -0.53
NEK3-203ENST00000551355 MYCLP12524 364 aaPredicted RBP11.75□□□□□ -0.53
NEK3-203ENST00000551355 EDNRBP24530 442 aa11.75□□□□□ -0.53
NEK3-203ENST00000551355 ADORA2AP29274 412 aa11.75□□□□□ -0.53
NEK3-203ENST00000551355 VEGFBP49765 207 aa11.75□□□□□ -0.53
NEK3-203ENST00000551355 FAM160A1Q05DH4 1040 aa11.75□□□□□ -0.53
NEK3-203ENST00000551355 C1QBPQ07021 282 aaKnown RBP11.75□□□□□ -0.53
NEK3-203ENST00000551355 PDE4DQ08499 809 aa11.75□□□□□ -0.53
NEK3-203ENST00000551355 MTMR1Q13613 665 aa11.75□□□□□ -0.53
NEK3-203ENST00000551355 KCNV1Q6PIU1 500 aa11.75□□□□□ -0.53
NEK3-203ENST00000551355 DPP9Q86TI2 863 aa11.75□□□□□ -0.53
NEK3-203ENST00000551355 ETNPPLQ8TBG4 499 aa11.75□□□□□ -0.53
NEK3-203ENST00000551355 MORC4Q8TE76 937 aa11.75□□□□□ -0.53
NEK3-203ENST00000551355 SOCS4Q8WXH5 440 aa11.75□□□□□ -0.53
NEK3-203ENST00000551355 LENG9Q96B70 501 aa11.75□□□□□ -0.53
NEK3-203ENST00000551355 INPP4AQ96PE3 977 aaPredicted RBP11.75□□□□□ -0.53
NEK3-203ENST00000551355 ZIC5Q96T25 663 aa11.75□□□□□ -0.53
NEK3-203ENST00000551355 RIT2Q99578 217 aa11.75□□□□□ -0.53
NEK3-203ENST00000551355 WDR11Q9BZH6 1224 aa11.75□□□□□ -0.53
NEK3-203ENST00000551355 TMEM60Q9H2L4 133 aa11.75□□□□□ -0.53
NEK3-203ENST00000551355 TTC12Q9H892 705 aaPredicted RBP11.75□□□□□ -0.53
NEK3-203ENST00000551355 TBC1D22BQ9NU19 505 aa11.75□□□□□ -0.53
NEK3-203ENST00000551355 TGFB3P10600 412 aa11.74□□□□□ -0.53
NEK3-203ENST00000551355 ITGB5P18084 799 aa11.74□□□□□ -0.53
NEK3-203ENST00000551355 UBA7P41226 1012 aa11.74□□□□□ -0.53
NEK3-203ENST00000551355 TXKP42681 527 aa11.74□□□□□ -0.53
NEK3-203ENST00000551355 FCGRTP55899 365 aa11.74□□□□□ -0.53
NEK3-203ENST00000551355 UBXN2AP68543 259 aa11.74□□□□□ -0.53
NEK3-203ENST00000551355 MRPS9P82933 396 aaKnown RBP11.74□□□□□ -0.53
NEK3-203ENST00000551355 CNTN2Q02246 1040 aa11.74□□□□□ -0.53
NEK3-203ENST00000551355 KIF22Q14807 665 aa11.74□□□□□ -0.53
NEK3-203ENST00000551355 ZNF792Q3KQV3 632 aa11.74□□□□□ -0.53
NEK3-203ENST00000551355 KCTD17Q8N5Z5 321 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms